MGE detailed information
MGE type: Prophage MGE length: 62219 bp
Accession: NZ_CP034806 Location: 1805916..1868134 Organism: Escherichia coli strain 2010C-3347 Replicon: chromosome
Accession: NZ_CP034806 Location: 1805916..1868134 Organism: Escherichia coli strain 2010C-3347 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A1D75_RS08970 () | 1801759..1802790 | - | 1032 | WP_000559900.1 | low conductance mechanosensitive channel YnaI | - |
| A1D75_RS08975 () | 1803034..1803291 | + | 258 | WP_000605090.1 | DUF2534 family protein | - |
| A1D75_RS08980 () | 1803341..1804291 | - | 951 | WP_001262123.1 | universal stress protein UspE | - |
| A1D75_RS08985 () | 1804443..1805195 | - | 753 | WP_000611911.1 | fumarate/nitrate reduction transcriptional regulator Fnr | - |
| A1D75_RS08990 () | 1805390..1805905 | - | 516 | WP_000945010.1 | methylated-DNA--[protein]-cysteine S-methyltransferase | - |
| A1D75_RS08995 () | 1805916..1806677 | - | 762 | Protein_1732 | AbgT family transporter | - |
| A1D75_RS09005 () | 1807988..1808755 | - | 768 | Protein_1734 | AbgT family transporter | - |
| A1D75_RS09010 () | 1808792..1810237 | - | 1446 | WP_001156434.1 | p-aminobenzoyl-glutamate hydrolase subunit AbgB | - |
| A1D75_RS09015 () | 1810237..1811547 | - | 1311 | WP_000444937.1 | p-aminobenzoyl-glutamate hydrolase subunit AbgA | - |
| A1D75_RS09020 () | 1811723..1812631 | + | 909 | WP_000885454.1 | LysR family transcriptional regulator | - |
| A1D75_RS09025 () | 1812961..1813524 | + | 564 | WP_001046821.1 | DNA endonuclease SmrA | - |
| A1D75_RS09030 () | 1813545..1814777 | - | 1233 | WP_000628061.1 | diguanylate cyclase DgcM | - |
| A1D75_RS29335 () | 1814971..1815018 | + | 48 | WP_211180494.1 | protein YnaN | - |
| A1D75_RS09035 () | 1815032..1816015 | + | 984 | WP_000387388.1 | zinc transporter ZntB | - |
| A1D75_RS29085 () | 1816290..1816460 | + | 171 | WP_001625136.1 | hypothetical protein | - |
| A1D75_RS09045 () | 1816493..1817866 | + | 1374 | WP_000123746.1 | ATP-dependent RNA helicase DbpA | - |
| A1D75_RS09050 () | 1817995..1818930 | - | 936 | WP_001157407.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| A1D75_RS09055 () | 1818982..1820217 | - | 1236 | WP_000040839.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| A1D75_RS09060 () | 1820219..1820434 | - | 216 | WP_000079604.1 | excisionase XisR | - |
| A1D75_RS09065 () | 1820534..1820722 | - | 189 | WP_001302840.1 | DUF1187 family protein | - |
| - () | 1820538..1820716 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1820538..1820716 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1820538..1820716 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1820538..1820716 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| A1D75_RS09070 () | 1820760..1820909 | - | 150 | WP_001443846.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| A1D75_RS09075 () | 1820965..1821774 | - | 810 | WP_000166313.1 | recombination protein RecT | - |
| A1D75_RS09080 () | 1821767..1824367 | - | 2601 | WP_000105140.1 | exodeoxyribonuclease VIII | - |
| A1D75_RS09085 () | 1824469..1824744 | - | 276 | WP_001344816.1 | hypothetical protein | - |
| A1D75_RS09090 () | 1824819..1824989 | - | 171 | WP_001352098.1 | conserved protein, Rac prophage | - |
| A1D75_RS09095 () | 1824989..1825210 | - | 222 | WP_000560223.1 | killing protein KilR | - |
| A1D75_RS09100 () | 1825652..1826140 | + | 489 | WP_001312793.1 | superinfection exclusion protein B | - |
| A1D75_RS09105 () | 1826137..1826292 | - | 156 | WP_001169151.1 | YdaF family protein | - |
| A1D75_RS09110 () | 1826303..1826482 | - | 180 | WP_001326317.1 | hypothetical protein | - |
| A1D75_RS09120 () | 1826725..1827144 | - | 420 | WP_000233319.1 | helix-turn-helix domain-containing protein | - |
| A1D75_RS09125 () | 1827224..1827478 | + | 255 | WP_001072342.1 | hypothetical protein | - |
| A1D75_RS09130 () | 1827475..1827897 | + | 423 | WP_000693803.1 | hypothetical protein | - |
| A1D75_RS09135 () | 1827975..1828763 | + | 789 | WP_001304174.1 | hypothetical protein | - |
| A1D75_RS09140 () | 1828770..1829516 | + | 747 | WP_000788980.1 | ATP-binding protein | - |
| A1D75_RS09145 () | 1829539..1830300 | + | 762 | WP_000450712.1 | DUF1627 domain-containing protein | - |
| A1D75_RS09150 () | 1830316..1830738 | + | 423 | WP_001141110.1 | DUF977 family protein | - |
| A1D75_RS09155 () | 1830844..1831056 | + | 213 | WP_000935420.1 | hypothetical protein | - |
| A1D75_RS09160 () | 1831089..1831306 | + | 218 | Protein_1765 | DUF4014 family protein | - |
| A1D75_RS09165 () | 1831308..1831571 | + | 264 | WP_000224233.1 | hypothetical protein | - |
| A1D75_RS09170 () | 1831582..1831743 | + | 162 | WP_000208018.1 | hypothetical protein | - |
| A1D75_RS09175 () | 1831822..1832067 | + | 246 | WP_000365100.1 | hypothetical protein | - |
| A1D75_RS09180 () | 1832499..1833650 | + | 1152 | WP_001100703.1 | DNA cytosine methyltransferase | - |
| A1D75_RS09185 () | 1833618..1834607 | - | 990 | WP_000016656.1 | hypothetical protein | - |
| A1D75_RS09190 () | 1834607..1835998 | - | 1392 | WP_000138556.1 | ATP-binding protein | - |
| A1D75_RS09195 () | 1836498..1837097 | + | 600 | WP_000940319.1 | DUF1367 family protein | - |
| A1D75_RS09200 () | 1837097..1837387 | + | 291 | WP_000247761.1 | DUF1364 domain-containing protein | - |
| A1D75_RS09205 () | 1837384..1837938 | + | 555 | WP_000640158.1 | DUF1133 family protein | - |
| A1D75_RS09220 () | 1838500..1838931 | + | 432 | WP_000466957.1 | tellurite resistance TerB family protein | - |
| A1D75_RS09225 () | 1838928..1839183 | + | 256 | Protein_1776 | DUF3927 family protein | - |
| A1D75_RS09230 () | 1839506..1841359 | + | 1854 | WP_000143079.1 | SASA family carbohydrate esterase | - |
| A1D75_RS09235 () | 1841509..1841724 | + | 216 | WP_000284522.1 | class II holin family protein | - |
| A1D75_RS09240 () | 1841729..1842073 | + | 345 | WP_000731221.1 | YdfR family protein | - |
| A1D75_RS09245 () | 1842124..1842657 | + | 534 | WP_000992086.1 | lysozyme | - |
| A1D75_RS09250 () | 1842931..1843626 | + | 696 | WP_000661712.1 | phage antirepressor protein | - |
| A1D75_RS09255 () | 1843721..1843852 | + | 132 | WP_001280923.1 | hypothetical protein | - |
| A1D75_RS09265 () | 1844075..1844260 | + | 186 | WP_012817877.1 | Rz1 family lipoprotein | - |
| A1D75_RS09280 () | 1844661..1844987 | + | 327 | WP_000828070.1 | TonB family protein | - |
| A1D75_RS09285 () | 1845119..1845319 | - | 201 | WP_000095744.1 | YlcI/YnfO family protein | - |
| A1D75_RS09290 () | 1845361..1845726 | + | 366 | WP_000829192.1 | HNH endonuclease | - |
| A1D75_RS09295 () | 1846015..1846578 | + | 564 | WP_000958380.1 | terminase small subunit | - |
| A1D75_RS09300 () | 1846575..1848236 | + | 1662 | WP_001411753.1 | terminase large subunit | - |
| A1D75_RS09305 () | 1848300..1850237 | + | 1938 | WP_000173011.1 | phage major capsid protein | - |
| A1D75_RS09310 () | 1850282..1850503 | + | 222 | WP_001063025.1 | hypothetical protein | - |
| A1D75_RS09315 () | 1850449..1853033 | + | 2585 | Protein_1791 | phage portal protein | - |
| A1D75_RS09320 () | 1853030..1853356 | + | 327 | WP_000125988.1 | head-tail connector protein | - |
| A1D75_RS09325 () | 1853366..1853716 | + | 351 | WP_001007911.1 | phage head closure protein | - |
| A1D75_RS09330 () | 1853713..1854159 | + | 447 | WP_000573391.1 | HK97 gp10 family phage protein | - |
| A1D75_RS09335 () | 1854156..1854500 | + | 345 | WP_000133393.1 | DUF3168 domain-containing protein | - |
| A1D75_RS09340 () | 1854569..1855285 | + | 717 | WP_001275479.1 | immunoglobulin domain-containing protein | - |
| A1D75_RS09345 () | 1855291..1855665 | + | 375 | WP_001030063.1 | phage tail assembly chaperone | - |
| A1D75_RS09350 () | 1855761..1855970 | + | 210 | WP_001453698.1 | DUF4035 domain-containing protein | - |
| A1D75_RS09355 () | 1856022..1859102 | + | 3081 | WP_000212768.1 | phage tail tape measure protein | - |
| A1D75_RS09360 () | 1859095..1859436 | + | 342 | WP_000807964.1 | phage tail protein | - |
| A1D75_RS09365 () | 1859436..1860134 | + | 699 | WP_001152159.1 | phage minor tail protein L | - |
| A1D75_RS09370 () | 1860145..1860888 | + | 744 | WP_000194763.1 | C40 family peptidase | - |
| A1D75_RS09375 () | 1860834..1861466 | + | 633 | WP_064732755.1 | tail assembly protein | - |
| A1D75_RS09385 () | 1861657..1862184 | - | 528 | WP_000649829.1 | hypothetical protein | VF |
| A1D75_RS09390 () | 1862318..1865815 | + | 3498 | WP_000515042.1 | host specificity protein J | - |
| A1D75_RS09395 () | 1865886..1866485 | + | 600 | WP_001230550.1 | hypothetical protein | VF |
| A1D75_RS09400 () | 1866550..1867863 | + | 1314 | WP_000268955.1 | ISNCY family transposase KIS | Transposase |
| A1D75_RS09405 () | 1867865..1868134 | + | 270 | WP_001023992.1 | phage tail fiber C-terminal domain-containing protein | - |
| A1D75_RS09410 () | 1868247..1868822 | + | 576 | WP_001131659.1 | DUF1076 domain-containing protein | - |
| A1D75_RS09415 () | 1868895..1869524 | + | 630 | WP_001443810.1 | DUF1076 domain-containing protein | - |
| A1D75_RS09420 () | 1869606..1870247 | + | 642 | WP_001143784.1 | DUF1076 domain-containing protein | - |
| A1D75_RS09425 () | 1870828..1871262 | - | 435 | WP_001295593.1 | universal stress protein UspF | - |
| A1D75_RS09430 () | 1871403..1872516 | - | 1114 | Protein_1813 | porin OmpN | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|