MGE detailed information
MGE type: Prophage MGE length: 49997 bp
Accession: NZ_CP034806 Location: 1651733..1701729 Organism: Escherichia coli strain 2010C-3347 Replicon: chromosome
Accession: NZ_CP034806 Location: 1651733..1701729 Organism: Escherichia coli strain 2010C-3347 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A1D75_RS08095 () | 1649108..1651534 | - | 2427 | WP_000041704.1 | dimethyl sulfoxide reductase subunit A | - |
| A1D75_RS08100 () | 1651733..1652038 | - | 306 | WP_000778147.1 | DUF1161 domain-containing protein | - |
| A1D75_RS08105 () | 1652146..1652856 | + | 711 | WP_001303515.1 | YnfC family lipoprotein | - |
| A1D75_RS08110 () | 1652859..1653419 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| A1D75_RS08115 () | 1653454..1653795 | - | 342 | WP_000705189.1 | DUF1283 family protein | - |
| A1D75_RS08120 () | 1653930..1654256 | + | 327 | WP_001302046.1 | YnfA family protein | - |
| A1D75_RS08130 () | 1654528..1655210 | - | 683 | Protein_1568 | DUF3596 domain-containing protein | - |
| A1D75_RS08135 () | 1655245..1655496 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| A1D75_RS08140 () | 1655569..1658040 | - | 2472 | WP_000048458.1 | exonuclease | - |
| A1D75_RS08145 () | 1658133..1658324 | - | 192 | WP_001090200.1 | DUF1482 family protein | - |
| A1D75_RS08150 () | 1658321..1658509 | - | 189 | WP_000449192.1 | cell division inhibition protein DicB | - |
| A1D75_RS08160 () | 1659078..1659296 | - | 219 | WP_001171930.1 | hypothetical protein | - |
| A1D75_RS08165 () | 1659368..1659667 | - | 300 | WP_001240334.1 | hypothetical protein | - |
| A1D75_RS08170 () | 1660020..1660298 | - | 279 | WP_001303511.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| A1D75_RS08175 () | 1660300..1660491 | - | 192 | WP_001302048.1 | hypothetical protein | Antitoxin Detail |
| A1D75_RS08180 () | 1660512..1660883 | - | 372 | WP_001169686.1 | hypothetical protein | - |
| A1D75_RS08185 () | 1660981..1661283 | + | 303 | WP_000172738.1 | transcriptional regulator | - |
| A1D75_RS08190 () | 1661280..1661705 | + | 426 | WP_000693943.1 | Rha family transcriptional regulator | - |
| A1D75_RS08195 () | 1661728..1662690 | + | 963 | WP_000095669.1 | helix-turn-helix domain-containing protein | - |
| A1D75_RS08200 () | 1662697..1663437 | + | 741 | WP_000788938.1 | ATP-binding protein | - |
| A1D75_RS08205 () | 1663463..1664232 | + | 770 | Protein_1582 | DUF1627 domain-containing protein | - |
| A1D75_RS08210 () | 1664248..1664643 | + | 396 | WP_001118159.1 | DUF977 family protein | - |
| A1D75_RS08215 () | 1664700..1665284 | + | 585 | WP_000206793.1 | DUF551 domain-containing protein | - |
| A1D75_RS08220 () | 1665400..1665504 | + | 105 | WP_001278450.1 | hypothetical protein | - |
| A1D75_RS08225 () | 1665750..1665905 | + | 156 | WP_001303917.1 | type I toxin-antitoxin system toxin HokD | - |
| A1D75_RS08230 () | 1666073..1666351 | + | 279 | WP_012779366.1 | hypothetical protein | - |
| A1D75_RS08235 () | 1666353..1667402 | + | 1050 | WP_001265161.1 | DUF968 domain-containing protein | - |
| A1D75_RS08240 () | 1667415..1667774 | + | 360 | WP_001217455.1 | RusA family crossover junction endodeoxyribonuclease | - |
| A1D75_RS08245 () | 1667771..1668460 | + | 690 | WP_001059381.1 | antiterminator | - |
| A1D75_RS08270 () | 1669099..1669527 | + | 429 | WP_001303509.1 | tellurite resistance protein | - |
| A1D75_RS08275 () | 1669524..1669779 | + | 256 | Protein_1592 | DUF3927 family protein | - |
| A1D75_RS08280 () | 1670005..1671855 | + | 1851 | WP_000023184.1 | SASA family carbohydrate esterase | - |
| A1D75_RS08285 () | 1672294..1672509 | + | 216 | WP_024180155.1 | class II holin family protein | - |
| A1D75_RS08290 () | 1672514..1672858 | + | 345 | WP_000731259.1 | YdfR family protein | - |
| A1D75_RS08295 () | 1672909..1673442 | + | 534 | WP_000992137.1 | lysozyme | - |
| A1D75_RS08300 () | 1673714..1674283 | + | 570 | WP_001056806.1 | hypothetical protein | - |
| A1D75_RS08305 () | 1674283..1674429 | + | 147 | WP_000539792.1 | hypothetical protein | - |
| A1D75_RS08315 () | 1674657..1674842 | + | 186 | WP_012816791.1 | Rz1 family lipoprotein | - |
| A1D75_RS08320 () | 1675267..1675494 | - | 228 | WP_000095736.1 | DUF3950 domain-containing protein | - |
| A1D75_RS08325 () | 1675536..1675901 | + | 366 | WP_000279786.1 | HNH endonuclease | - |
| A1D75_RS08335 () | 1676191..1676754 | + | 564 | WP_000958416.1 | terminase small subunit | - |
| A1D75_RS08340 () | 1676751..1678412 | + | 1662 | WP_001301491.1 | terminase large subunit | - |
| A1D75_RS08345 () | 1678476..1680413 | + | 1938 | WP_000173030.1 | phage major capsid protein | - |
| A1D75_RS08350 () | 1680458..1680679 | + | 222 | WP_001063099.1 | hypothetical protein | - |
| A1D75_RS08355 () | 1680625..1683126 | + | 2502 | WP_000267292.1 | phage portal protein | - |
| A1D75_RS08360 () | 1683206..1683532 | + | 327 | WP_000126019.1 | head-tail connector protein | - |
| A1D75_RS08365 () | 1683542..1683892 | + | 351 | WP_001007901.1 | phage head closure protein | - |
| A1D75_RS08370 () | 1683889..1684335 | + | 447 | WP_000573374.1 | HK97 gp10 family phage protein | - |
| A1D75_RS08375 () | 1684332..1684676 | + | 345 | WP_000133388.1 | DUF3168 domain-containing protein | - |
| A1D75_RS08380 () | 1684742..1685458 | + | 717 | WP_001275434.1 | immunoglobulin domain-containing protein | - |
| A1D75_RS08385 () | 1685473..1685847 | + | 375 | WP_000710952.1 | phage tail assembly chaperone | - |
| A1D75_RS08390 () | 1685943..1686152 | + | 210 | WP_001453746.1 | DUF4035 domain-containing protein | - |
| A1D75_RS08395 () | 1686200..1689442 | + | 3243 | WP_000212822.1 | phage tail tape measure protein | - |
| A1D75_RS08400 () | 1689435..1689776 | + | 342 | WP_000807954.1 | phage tail protein | - |
| A1D75_RS08405 () | 1689776..1690474 | + | 699 | WP_001179481.1 | phage minor tail protein L | - |
| A1D75_RS08410 () | 1690485..1691228 | + | 744 | WP_000194720.1 | C40 family peptidase | - |
| A1D75_RS08415 () | 1691174..1691806 | + | 633 | WP_050439450.1 | tail assembly protein | - |
| A1D75_RS08420 () | 1692149..1693324 | + | 1176 | WP_001304109.1 | host specificity protein J | - |
| A1D75_RS08425 () | 1693276..1695621 | + | 2346 | WP_115801855.1 | host specificity protein J | - |
| A1D75_RS08430 () | 1695689..1696288 | + | 600 | WP_001228304.1 | hypothetical protein | VF |
| A1D75_RS08435 () | 1696440..1697753 | + | 1314 | WP_000216532.1 | ISNCY family transposase KIS | Transposase |
| A1D75_RS08440 () | 1697755..1698024 | + | 270 | WP_001023474.1 | phage tail fiber C-terminal domain-containing protein | - |
| A1D75_RS08445 () | 1698137..1698711 | + | 575 | Protein_1624 | hypothetical protein | VF |
| A1D75_RS08450 () | 1699051..1700376 | - | 1326 | WP_001025672.1 | hypothetical protein | VF |
| A1D75_RS08460 () | 1701037..1701951 | - | 915 | Protein_1626 | Tyrosine recombinase XerD ; Integrase | Integrase |
| A1D75_RS08465 () | 1701974..1702096 | + | 123 | WP_106409364.1 | phage tail fiber C-terminal domain-containing protein | - |
| A1D75_RS08470 () | 1702203..1703114 | + | 912 | WP_000950979.1 | type III secretion system effector kinase NleH1-2 | - |
| A1D75_RS08475 () | 1703180..1703749 | + | 570 | WP_000938103.1 | T3SS effector caspase inhibitor NleF | - |
| A1D75_RS08480 () | 1703796..1704430 | - | 635 | Protein_1630 | transposase | - |
| A1D75_RS08485 () | 1704715..1706253 | - | 1539 | WP_000998048.1 | IS66-like element ISEc8 family transposase | - |
| A1D75_RS08490 () | 1706303..1706650 | - | 348 | WP_000612591.1 | IS66 family insertion sequence element accessory protein TnpB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. EDL933 | Prophage | TA20321 | NC_002655 | 2282958..2329636 | 0.005 |