MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 94586 bp
Accession: NZ_CP034802 Location: 1..94586 Organism: Escherichia coli strain 2010C-3142 Replicon: plasmid p2010C-3142
Accession: NZ_CP034802 Location: 1..94586 Organism: Escherichia coli strain 2010C-3142 Replicon: plasmid p2010C-3142
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AYR10_RS27980 () | 503..1669 | + | 1167 | WP_000772446.1 | plasmid-partitioning protein SopA | - |
| AYR10_RS27985 () | 1669..2640 | + | 972 | WP_000817031.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| AYR10_RS28000 () | 3335..4237 | + | 903 | WP_000273919.1 | DUF1281 domain-containing protein | - |
| AYR10_RS28005 () | 4241..4546 | + | 306 | WP_010891292.1 | hypothetical protein | - |
| AYR10_RS28010 () | 4623..5306 | + | 684 | WP_000085945.1 | DNA methylase | - |
| AYR10_RS28015 () | 5307..5528 | + | 222 | WP_001104869.1 | hypothetical protein | - |
| AYR10_RS28020 () | 5422..5976 | + | 555 | WP_001358893.1 | DUF1380 family protein | - |
| AYR10_RS28855 () | 6022..6798 | + | 777 | WP_001005037.1 | hypothetical protein | - |
| AYR10_RS28035 () | 7339..7641 | + | 303 | WP_010891293.1 | antirestriction protein | - |
| AYR10_RS28040 () | 7688..8110 | + | 423 | WP_000271685.1 | DUF1380 family protein | - |
| AYR10_RS28045 () | 8107..8298 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| AYR10_RS28860 () | 8268..8777 | - | 510 | WP_032245379.1 | hypothetical protein | - |
| AYR10_RS28060 () | 9294..9524 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| AYR10_RS28065 () | 9576..10937 | + | 1362 | WP_000199442.1 | DUF3560 domain-containing protein | - |
| AYR10_RS28070 () | 10984..11547 | + | 564 | WP_001302171.1 | class I SAM-dependent methyltransferase | - |
| AYR10_RS28075 () | 11633..12094 | - | 462 | WP_001304227.1 | hypothetical protein | - |
| AYR10_RS28865 () | 12164..12370 | + | 207 | WP_000547965.1 | hypothetical protein | - |
| AYR10_RS28085 () | 12396..12848 | + | 453 | WP_000290823.1 | single-stranded DNA-binding protein | - |
| AYR10_RS28090 () | 12905..13138 | + | 234 | WP_000005995.1 | DUF905 family protein | - |
| AYR10_RS28095 () | 13204..15162 | + | 1959 | WP_000117168.1 | ParB/RepB/Spo0J family partition protein | - |
| AYR10_RS28100 () | 15217..15651 | + | 435 | WP_000845908.1 | conjugation system SOS inhibitor PsiB | - |
| AYR10_RS28105 () | 15648..16409 | + | 762 | WP_001276250.1 | plasmid SOS inhibition protein A | - |
| - () | 16378..16576 | + | 199 | NuclAT_0 | - | - |
| - () | 16378..16576 | + | 199 | NuclAT_0 | - | - |
| - () | 16378..16576 | + | 199 | NuclAT_0 | - | - |
| - () | 16378..16576 | + | 199 | NuclAT_0 | - | - |
| AYR10_RS28110 () | 16641..16799 | + | 159 | WP_001302184.1 | type I toxin-antitoxin system Hok family toxin | - |
| AYR10_RS28115 () | 16933..18954 | + | 2022 | Protein_23 | relaxase/mobilization nuclease domain-containing protein | - |
| AYR10_RS28120 () | 19022..19453 | + | 432 | WP_001453090.1 | hypothetical protein | - |
| AYR10_RS28130 () | 20083..20432 | - | 350 | Protein_25 | IS3 family transposase | - |
| AYR10_RS28135 () | 20526..20789 | + | 264 | Protein_26 | IS21 family transposase | - |
| AYR10_RS28140 () | 20829..20949 | + | 121 | Protein_27 | ATP-binding protein | - |
| AYR10_RS28145 () | 20946..21098 | + | 153 | Protein_28 | IS1 family transposase | - |
| AYR10_RS28150 () | 21205..30714 | + | 9510 | WP_000581721.1 | toxin B | - |
| AYR10_RS28155 () | 30788..31012 | + | 225 | Protein_30 | IS3 family transposase | - |
| AYR10_RS28160 () | 31080..31250 | - | 171 | Protein_31 | ATP-binding protein | - |
| AYR10_RS28165 () | 31257..31508 | - | 252 | Protein_32 | transposase | - |
| AYR10_RS28170 () | 31565..32953 | + | 1389 | Protein_33 | conjugative transfer relaxase/helicase TraI | - |
| AYR10_RS28175 () | 32973..33719 | + | 747 | WP_000205762.1 | conjugal transfer pilus acetylase TraX | - |
| AYR10_RS28180 () | 33778..34638 | + | 861 | WP_000704522.1 | alpha/beta hydrolase | - |
| AYR10_RS28185 () | 34741..35301 | + | 561 | WP_000840472.1 | fertility inhibition protein FinO | - |
| AYR10_RS28190 () | 35434..35646 | + | 213 | WP_001302189.1 | ANR family transcriptional regulator | - |
| AYR10_RS28195 () | 35891..36352 | + | 462 | WP_001233856.1 | thermonuclease family protein | - |
| AYR10_RS28200 () | 36398..36607 | + | 210 | WP_001302200.1 | hemolysin expression modulator Hha | - |
| AYR10_RS28205 () | 36645..36983 | + | 339 | WP_000766796.1 | hypothetical protein | - |
| AYR10_RS28210 () | 37223..37477 | + | 255 | WP_000083831.1 | replication regulatory protein RepA | - |
| AYR10_RS28220 () | 37713..37787 | + | 75 | WP_001370046.1 | RepA leader peptide Tap | - |
| AYR10_RS28225 () | 37780..38637 | + | 858 | WP_000130945.1 | incFII family plasmid replication initiator RepA | - |
| AYR10_RS28240 () | 39550..39834 | + | 285 | WP_001178089.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| AYR10_RS28245 () | 39834..40109 | + | 276 | WP_000421248.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| AYR10_RS28250 () | 40204..40410 | + | 207 | WP_001105064.1 | hypothetical protein | - |
| AYR10_RS28255 () | 40510..40725 | - | 216 | Protein_47 | transposase | - |
| AYR10_RS28260 () | 40769..41335 | - | 567 | Protein_48 | IS3-like element IS600 family transposase | - |
| AYR10_RS28265 () | 41335..41751 | - | 417 | Protein_49 | IS91 family transposase | - |
| AYR10_RS28270 () | 41751..41936 | - | 186 | WP_001302179.1 | hypothetical protein | - |
| AYR10_RS28275 () | 42113..44323 | + | 2211 | WP_000592771.1 | catalase/peroxidase KatP | - |
| AYR10_RS28280 () | 44367..44756 | + | 390 | WP_001172748.1 | cytochrome b562 family protein | - |
| AYR10_RS28285 () | 44813..45801 | + | 989 | Protein_53 | IS3 family transposase | - |
| AYR10_RS28295 () | 45982..49884 | + | 3903 | WP_001034100.1 | serine protease autotransporter EspP | - |
| AYR10_RS28300 () | 50140..50621 | - | 482 | Protein_55 | IS1 family transposase | - |
| AYR10_RS28310 () | 52063..52884 | + | 822 | WP_001302199.1 | polysaccharide deacetylase family protein | - |
| AYR10_RS28315 () | 52884..53990 | + | 1107 | WP_000975743.1 | glycosyltransferase family 4 protein | - |
| AYR10_RS28320 () | 54080..55801 | + | 1722 | WP_000550559.1 | phosphoethanolamine transferase CptA | - |
| AYR10_RS28325 () | 55875..56873 | + | 999 | WP_001302181.1 | lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase | - |
| AYR10_RS28330 () | 56926..57114 | + | 189 | Protein_60 | hypothetical protein | - |
| AYR10_RS28335 () | 57241..57621 | + | 381 | WP_001171540.1 | IS66 family insertion sequence hypothetical protein | - |
| AYR10_RS28340 () | 57618..57965 | + | 348 | WP_000612591.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| AYR10_RS28345 () | 58015..59553 | + | 1539 | WP_000998042.1 | IS66-like element ISEc8 family transposase | - |
| AYR10_RS28350 () | 59668..59754 | - | 87 | Protein_64 | transposase | - |
| AYR10_RS28365 () | 60214..62910 | + | 2697 | WP_001358886.1 | metalloprotease StcE | - |
| AYR10_RS28370 () | 62997..63872 | + | 876 | WP_001302175.1 | type II secretion system protein GspC | - |
| AYR10_RS28375 () | 63873..65840 | + | 1968 | WP_001302177.1 | variant type II secretion system secretin EtpD | - |
| AYR10_RS28380 () | 65840..67345 | + | 1506 | WP_000092338.1 | type II secretion system ATPase GspE | - |
| AYR10_RS28385 () | 67347..68570 | + | 1224 | WP_001173152.1 | type II secretion system inner membrane protein GspF | - |
| AYR10_RS28390 () | 68601..69035 | + | 435 | WP_001231211.1 | type II secretion system major pseudopilin GspG | - |
| AYR10_RS28395 () | 69032..69586 | + | 555 | WP_000082929.1 | type II secretion system minor pseudopilin GspH | - |
| AYR10_RS28400 () | 69601..69948 | + | 348 | WP_000173396.1 | type II secretion system minor pseudopilin GspI | - |
| AYR10_RS28405 () | 69945..70544 | + | 600 | WP_000082782.1 | type II secretion system minor pseudopilin GspJ | - |
| AYR10_RS28410 () | 70541..71518 | + | 978 | WP_000776550.1 | type II secretion system minor pseudopilin GspK | - |
| AYR10_RS28415 () | 71557..72729 | + | 1173 | WP_071525076.1 | type II secretion system protein GspL | - |
| AYR10_RS28420 () | 72716..73228 | + | 513 | WP_001004187.1 | type II secretion system protein M | - |
| AYR10_RS28425 () | 73286..74119 | + | 834 | WP_000096786.1 | A24 family peptidase | - |
| AYR10_RS28430 () | 74211..74612 | + | 402 | WP_000971918.1 | GspS family T2SS pilot lipoprotein variant EptO | - |
| AYR10_RS28440 () | 74791..75962 | + | 1172 | Protein_79 | IS3 family transposase | - |
| AYR10_RS28450 () | 76503..77018 | + | 516 | WP_000839950.1 | enterohemolysin-activating lysine-acyltransferase EhxC | - |
| AYR10_RS28455 () | 77020..80016 | + | 2997 | WP_000217733.1 | enterohemolysin EhxA | - |
| AYR10_RS28460 () | 80066..82186 | + | 2121 | WP_000987091.1 | enterohemolysin T1SS ABC transporter permease/ATPase EhxB | - |
| AYR10_RS28465 () | 82190..83629 | + | 1440 | WP_001213542.1 | enterohemolysin T1SS ABC transporter subunit EhxD | - |
| AYR10_RS28870 () | 83750..84242 | + | 493 | Protein_84 | MarR family transcriptional regulator | - |
| AYR10_RS28485 () | 84373..84603 | + | 231 | WP_010891288.1 | hypothetical protein | - |
| AYR10_RS28490 () | 84724..85464 | + | 741 | WP_001066920.1 | tyrosine-type recombinase/integrase | - |
| AYR10_RS28495 () | 85749..86726 | - | 978 | WP_000361615.1 | RepB family plasmid replication initiator protein | - |
| AYR10_RS28505 () | 87134..87334 | - | 201 | WP_000708307.1 | hypothetical protein | - |
| AYR10_RS28510 () | 87331..87951 | - | 621 | WP_001248529.1 | hypothetical protein | - |
| AYR10_RS28515 () | 87948..88631 | - | 684 | WP_010891291.1 | DNA-binding protein | - |
| AYR10_RS28520 () | 89090..89308 | + | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | - |
| AYR10_RS28535 () | 90629..90928 | + | 300 | WP_027868286.1 | type II toxin-antitoxin system toxin CcdB | - |
| AYR10_RS28540 () | 90929..91735 | + | 807 | WP_000016989.1 | site-specific integrase | - |
| AYR10_RS28550 () | 92458..93670 | - | 1213 | Protein_95 | IS3 family transposase | - |
| AYR10_RS28555 () | 93746..94501 | + | 756 | WP_000852148.1 | replication initiation protein RepE | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|