MGE detailed information
MGE type: Genomic_island MGE length: 21215 bp
Accession: NZ_CP034801 Location: 1390169..1411383 Organism: Escherichia coli strain 2010C-3142 Replicon: chromosome
Accession: NZ_CP034801 Location: 1390169..1411383 Organism: Escherichia coli strain 2010C-3142 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AYR10_RS06655 () | 1385895..1386437 | + | 543 | WP_000934391.1 | hypothetical protein | - |
| AYR10_RS06660 () | 1386730..1388880 | + | 2151 | WP_001298933.1 | pyruvate/proton symporter BtsT | - |
| AYR10_RS06665 () | 1388930..1389133 | + | 204 | WP_000467859.1 | YbdD/YjiX family protein | - |
| AYR10_RS06670 () | 1389144..1390100 | + | 957 | WP_001297640.1 | GTPase | - |
| AYR10_RS06675 () | 1390169..1391527 | - | 1359 | WP_001304004.1 | DUF262 domain-containing protein | - |
| AYR10_RS06680 () | 1391536..1391820 | - | 285 | WP_001304005.1 | DUF262 domain-containing protein | - |
| AYR10_RS06685 () | 1392098..1394530 | + | 2433 | WP_000819018.1 | DEAD/DEAH box helicase family protein | - |
| AYR10_RS06690 () | 1394597..1396066 | + | 1470 | WP_001302468.1 | type I restriction-modification system subunit M | - |
| AYR10_RS06695 () | 1396066..1397820 | + | 1755 | WP_000110082.1 | restriction endonuclease subunit S | - |
| - () | 1397970..1398046 | - | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 1397970..1398046 | - | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 1397970..1398046 | - | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 1397970..1398046 | - | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 1397970..1398046 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 1397970..1398046 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 1397970..1398046 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 1397970..1398046 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| AYR10_RS06700 () | 1398041..1398382 | + | 342 | WP_000132630.1 | endoribonuclease SymE | Toxin Detail |
| AYR10_RS06705 () | 1398429..1399592 | - | 1164 | WP_001304006.1 | DUF1524 domain-containing protein | - |
| AYR10_RS06710 () | 1399640..1400521 | - | 882 | WP_001304007.1 | DUF262 domain-containing protein | - |
| AYR10_RS06715 () | 1400618..1400782 | - | 165 | WP_000394274.1 | DUF1127 domain-containing protein | - |
| AYR10_RS06720 () | 1400959..1402371 | + | 1413 | WP_000199295.1 | PLP-dependent aminotransferase family protein | - |
| AYR10_RS28595 () | 1402614..1402814 | - | 201 | WP_001310455.1 | hypothetical protein | - |
| AYR10_RS06725 () | 1402819..1403571 | - | 753 | Protein_1280 | hypothetical protein | VF |
| AYR10_RS06735 () | 1404038..1405270 | + | 1233 | WP_001136983.1 | multidrug efflux MFS transporter MdtM | - |
| AYR10_RS06740 () | 1405311..1406582 | + | 1272 | WP_001037406.1 | DUF445 domain-containing protein | - |
| AYR10_RS06745 () | 1406698..1407849 | + | 1152 | WP_001301805.1 | 2-hydroxyacyl-CoA dehydratase subunit D | - |
| AYR10_RS06750 () | 1407859..1408626 | + | 768 | WP_000222489.1 | hypothetical protein | - |
| AYR10_RS06755 () | 1408623..1408889 | + | 267 | WP_000657677.1 | DUF3343 domain-containing protein | - |
| AYR10_RS06760 () | 1409200..1411383 | + | 2184 | WP_000535062.1 | hypothetical protein | VF |
| AYR10_RS06770 () | 1411649..1412491 | + | 843 | WP_000746206.1 | YjiK family protein | - |
| AYR10_RS06775 () | 1412559..1413737 | + | 1179 | WP_001089435.1 | MFS transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. EDL933 | NC_002655 | 5456776..5475497 | 0.003 | |||
| Escherichia coli O157:H7 str. Sakai | NC_002695 | 5426911..5445631 | 0.003 |