MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 42137 bp
Accession: NZ_CP034798 Location: 1..42137 Organism: Escherichia coli strain 08-3918 Replicon: plasmid p08-3918-2
Accession: NZ_CP034798 Location: 1..42137 Organism: Escherichia coli strain 08-3918 Replicon: plasmid p08-3918-2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AYP37_RS28045 () | 1..366 | + | 366 | WP_127835401.1 | zinc transporter | - |
| AYP37_RS28050 () | 384..1136 | + | 753 | WP_127835402.1 | conjugal transfer protein TraL | - |
| AYP37_RS28055 () | 1138..1845 | + | 708 | WP_000108795.1 | hypothetical protein | - |
| AYP37_RS28060 () | 1865..2311 | + | 447 | WP_021580490.1 | hypothetical protein | - |
| AYP37_RS28065 () | 2314..2805 | + | 492 | WP_021529587.1 | hypothetical protein | - |
| AYP37_RS28070 () | 2807..3070 | + | 264 | WP_000224227.1 | hypothetical protein | - |
| AYP37_RS28075 () | 3081..3401 | + | 321 | WP_000206710.1 | hypothetical protein | - |
| AYP37_RS28080 () | 3532..3969 | - | 438 | WP_000466318.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| AYP37_RS28085 () | 3994..4176 | - | 183 | WP_000833470.1 | type II toxin-antitoxin system HicA family toxin | - |
| AYP37_RS28090 () | 4734..4916 | + | 183 | WP_001401700.1 | hypothetical protein | - |
| AYP37_RS28095 () | 5304..5582 | - | 279 | WP_000545938.1 | hypothetical protein | - |
| AYP37_RS28110 () | 6132..6383 | - | 252 | WP_001132407.1 | transcriptional regulator | Antitoxin Detail |
| AYP37_RS28115 () | 6373..6633 | - | 261 | WP_000702245.1 | hypothetical protein | Toxin Detail |
| AYP37_RS28120 () | 6685..6909 | - | 225 | WP_000814384.1 | hypothetical protein | - |
| AYP37_RS28125 () | 7007..7216 | - | 210 | WP_000866037.1 | hypothetical protein | - |
| AYP37_RS28130 () | 7257..7580 | - | 324 | WP_000432876.1 | hypothetical protein | - |
| AYP37_RS28140 () | 8161..8490 | - | 330 | WP_000855121.1 | hypothetical protein | - |
| AYP37_RS28150 () | 9088..9753 | + | 666 | WP_000532148.1 | P-loop NTPase | - |
| AYP37_RS28675 () | 9827..10111 | + | 285 | WP_001162371.1 | hypothetical protein | - |
| AYP37_RS28160 () | 10129..10725 | - | 597 | WP_000125164.1 | hypothetical protein | - |
| AYP37_RS28165 () | 10875..11036 | - | 162 | WP_001434039.1 | type I toxin-antitoxin system Hok family toxin | - |
| AYP37_RS28515 () | 11230..11391 | - | 162 | WP_001128311.1 | hypothetical protein | - |
| AYP37_RS28180 () | 12125..12343 | + | 219 | WP_001428466.1 | hypothetical protein | - |
| AYP37_RS28185 () | 12441..13469 | - | 1029 | WP_001175214.1 | replication initiation protein | - |
| AYP37_RS28190 () | 14549..15055 | + | 507 | WP_001358485.1 | CaiF/GrlA family transcriptional regulator | - |
| AYP37_RS28195 () | 15048..15263 | + | 216 | WP_000049866.1 | DUF1187 family protein | - |
| AYP37_RS28520 () | 15256..15432 | + | 177 | WP_000753050.1 | hypothetical protein | - |
| AYP37_RS28200 () | 15459..16412 | + | 954 | WP_072130394.1 | SPFH/Band 7/PHB domain protein | - |
| AYP37_RS28205 () | 16474..16917 | + | 444 | WP_001687695.1 | NfeD family protein | - |
| AYP37_RS28525 () | 16921..17091 | + | 171 | WP_000550720.1 | hypothetical protein | - |
| AYP37_RS28210 () | 17320..17547 | + | 228 | WP_206614668.1 | hypothetical protein | - |
| AYP37_RS28215 () | 17580..17837 | + | 258 | WP_001542015.1 | hypothetical protein | - |
| AYP37_RS28220 () | 17818..18120 | + | 303 | WP_001360345.1 | hypothetical protein | - |
| AYP37_RS28225 () | 18117..18374 | + | 258 | WP_000739144.1 | hypothetical protein | - |
| AYP37_RS28230 () | 18378..19373 | + | 996 | WP_001028543.1 | type IV secretion system protein | - |
| AYP37_RS28235 () | 19379..20020 | + | 642 | WP_001463086.1 | hypothetical protein | VF |
| AYP37_RS28240 () | 20022..20276 | + | 255 | WP_001043555.1 | EexN family lipoprotein | - |
| AYP37_RS28245 () | 20429..21064 | + | 636 | WP_000835771.1 | hypothetical protein | - |
| AYP37_RS28250 () | 21131..21430 | + | 300 | WP_000835763.1 | IncN plasmid KikA protein | - |
| AYP37_RS28255 () | 21433..22668 | + | 1236 | WP_000733393.1 | hypothetical protein | VF |
| AYP37_RS28260 () | 22674..23111 | + | 438 | WP_000539665.1 | type IV pilus biogenesis protein PilM | - |
| AYP37_RS28265 () | 23230..23628 | + | 399 | WP_001153669.1 | hypothetical protein | - |
| AYP37_RS28270 () | 23649..24233 | + | 585 | WP_001177114.1 | Type IV secretion system protein virB1 | VF |
| AYP37_RS28680 () | 24233..24523 | + | 291 | WP_000865478.1 | hypothetical protein | - |
| AYP37_RS28280 () | 24594..24914 | + | 321 | WP_000362081.1 | VirB3 family type IV secretion system protein | - |
| AYP37_RS28285 () | 24920..27277 | + | 2358 | WP_000548953.1 | VirB4 family type IV secretion system protein | - |
| AYP37_RS28295 () | 27443..28177 | + | 735 | WP_023155253.1 | Type IV secretion system protein virB8 | VF |
| AYP37_RS28300 () | 28243..28944 | + | 702 | WP_000274524.1 | Type IV secretion system protein PtlF | VF |
| AYP37_RS28305 () | 28934..30073 | + | 1140 | WP_000790640.1 | Type IV secretion system protein virB10 | VF |
| AYP37_RS28310 () | 30092..31147 | + | 1056 | WP_001059977.1 | Type IV secretion system protein VirB11 | VF |
| AYP37_RS28315 () | 31163..33121 | + | 1959 | WP_127835403.1 | type IV secretory system conjugative DNA transfer family protein | - |
| AYP37_RS28320 () | 33172..34815 | + | 1644 | WP_001035589.1 | Outer membrane lipoprotein BfpB | VF |
| AYP37_RS28325 () | 34854..36176 | + | 1323 | WP_010895889.1 | type 4b pilus protein PilO2 | - |
| AYP37_RS28330 () | 36160..36654 | + | 495 | WP_000912553.1 | hypothetical protein | VF |
| AYP37_RS28335 () | 36679..38217 | + | 1539 | WP_000466227.1 | Type II secretion system protein E | VF |
| AYP37_RS28340 () | 38208..39317 | + | 1110 | WP_000974903.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| AYP37_RS28345 () | 39362..39919 | + | 558 | WP_000095049.1 | hypothetical protein | - |
| AYP37_RS28350 () | 39986..40468 | + | 483 | WP_023226007.1 | hypothetical protein | VF |
| AYP37_RS28355 () | 40472..41107 | + | 636 | WP_000934978.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| AYP37_RS28360 () | 41120..42137 | + | 1018 | WP_099356641.1 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|