MGE detailed information
MGE type: Genomic_island MGE length: 10041 bp
Accession: NZ_CP034797 Location: 2246419..2256459 Organism: Escherichia coli strain 08-3918 Replicon: chromosome
Accession: NZ_CP034797 Location: 2246419..2256459 Organism: Escherichia coli strain 08-3918 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AYP37_RS12250 () | 2241617..2242825 | - | 1209 | WP_001301837.1 | propionate kinase | - |
| AYP37_RS12255 () | 2242851..2244182 | - | 1332 | WP_000107723.1 | threonine/serine transporter TdcC | - |
| AYP37_RS12260 () | 2244204..2245193 | - | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| AYP37_RS12265 () | 2245292..2246230 | - | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| AYP37_RS28745 () | 2246545..2246763 | + | 219 | WP_000033206.1 | transcriptional activator TdcR | - |
| AYP37_RS12275 () | 2247019..2247558 | + | 540 | WP_000675739.1 | hypothetical protein | - |
| AYP37_RS12280 () | 2247580..2248767 | + | 1188 | WP_000484640.1 | YhaC family protein | - |
| AYP37_RS12290 () | 2249283..2250428 | - | 1146 | WP_001301934.1 | glycerate 2-kinase | - |
| AYP37_RS12295 () | 2250525..2251415 | - | 891 | WP_001303675.1 | 2-hydroxy-3-oxopropionate reductase | - |
| AYP37_RS12300 () | 2251445..2252215 | - | 771 | WP_001058231.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| AYP37_RS12305 () | 2252231..2253565 | - | 1335 | WP_000599636.1 | galactarate/glucarate/glycerate transporter GarP | - |
| AYP37_RS12310 () | 2253940..2255511 | + | 1572 | WP_001273776.1 | galactarate dehydratase | - |
| AYP37_RS12315 () | 2255660..2255995 | + | 336 | WP_001302819.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| AYP37_RS12320 () | 2255995..2256459 | + | 465 | WP_000347273.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| AYP37_RS12325 () | 2256514..2257323 | - | 810 | WP_000072187.1 | aga operon transcriptional regulator AgaR | - |
| AYP37_RS12330 () | 2257572..2258852 | + | 1281 | WP_000681927.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| AYP37_RS12335 () | 2258875..2259348 | + | 474 | WP_001301475.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| AYP37_RS12340 () | 2259359..2260138 | + | 780 | WP_000406214.1 | PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC | - |
| AYP37_RS12345 () | 2260128..2261006 | + | 879 | WP_001295548.1 | PTS system mannose/fructose/sorbose family transporter subunit IID | - |
| AYP37_RS12350 () | 2261024..2261458 | + | 435 | WP_000948831.1 | PTS sugar transporter subunit IIA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. Sakai | Genomic island | TA20368 | NC_002695 | 4007011..4017164 | 0 |