MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 94189 bp
Accession: NZ_CP034796 Location: 1..94189 Organism: Escherichia coli strain 08-3918 Replicon: plasmid p08-3918-1
Accession: NZ_CP034796 Location: 1..94189 Organism: Escherichia coli strain 08-3918 Replicon: plasmid p08-3918-1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AYP37_RS00010 () | 7509..7661 | - | 153 | Protein_1 | IS1 family transposase | - |
| AYP37_RS00015 () | 7658..7778 | - | 121 | Protein_2 | IS21 family transposase ISEc62 | Transposase |
| AYP37_RS00020 () | 7818..8081 | - | 264 | Protein_3 | IS21 family transposase ISEc62 | Transposase |
| AYP37_RS00025 () | 8175..8524 | + | 350 | Protein_4 | IS3 family transposase IS3H | Transposase |
| AYP37_RS00035 () | 9047..10260 | + | 1214 | WP_162829202.1 | IS3 family transposase IS1203 | Transposase |
| AYP37_RS00040 () | 10488..10919 | - | 432 | WP_001453090.1 | hypothetical protein | - |
| AYP37_RS00045 () | 10987..13008 | - | 2022 | Protein_7 | hypothetical protein | Relaxase |
| AYP37_RS00050 () | 13142..13300 | - | 159 | WP_001302184.1 | type I toxin-antitoxin system Hok family toxin | - |
| - () | 13365..13563 | - | 199 | NuclAT_0 | - | - |
| - () | 13365..13563 | - | 199 | NuclAT_0 | - | - |
| - () | 13365..13563 | - | 199 | NuclAT_0 | - | - |
| - () | 13365..13563 | - | 199 | NuclAT_0 | - | - |
| AYP37_RS00055 () | 13532..14293 | - | 762 | WP_001276250.1 | plasmid SOS inhibition protein A | - |
| AYP37_RS00060 () | 14290..14724 | - | 435 | WP_000845908.1 | conjugation system SOS inhibitor PsiB | - |
| AYP37_RS00065 () | 14779..16737 | - | 1959 | WP_000117168.1 | ParB/RepB/Spo0J family partition protein | - |
| AYP37_RS00070 () | 16803..17036 | - | 234 | WP_000005995.1 | DUF905 family protein | - |
| AYP37_RS00075 () | 17093..17545 | - | 453 | WP_000290823.1 | single-stranded DNA-binding protein | - |
| AYP37_RS28530 () | 17571..17777 | - | 207 | WP_000547965.1 | hypothetical protein | - |
| AYP37_RS00085 () | 17847..18308 | + | 462 | WP_001304227.1 | hypothetical protein | - |
| AYP37_RS00090 () | 18394..18957 | - | 564 | WP_001302171.1 | class I SAM-dependent methyltransferase | - |
| AYP37_RS00095 () | 19004..20365 | - | 1362 | WP_000199442.1 | DUF3560 domain-containing protein | - |
| AYP37_RS00100 () | 20417..20647 | - | 231 | WP_000218642.1 | hypothetical protein | - |
| AYP37_RS28365 () | 21164..21673 | + | 510 | WP_032245379.1 | hypothetical protein | - |
| AYP37_RS00115 () | 21643..21834 | - | 192 | WP_001027495.1 | hypothetical protein | - |
| AYP37_RS00120 () | 21831..22253 | - | 423 | WP_000271685.1 | DUF1380 family protein | - |
| AYP37_RS00125 () | 22300..22602 | - | 303 | WP_010891293.1 | antirestriction protein | - |
| AYP37_RS28535 () | 23143..23919 | - | 777 | WP_001005037.1 | hypothetical protein | - |
| AYP37_RS00140 () | 23965..24519 | - | 555 | WP_001358893.1 | DUF1380 family protein | - |
| AYP37_RS00145 () | 24413..24634 | - | 222 | WP_001104869.1 | hypothetical protein | - |
| AYP37_RS00150 () | 24635..25318 | - | 684 | WP_000085945.1 | DNA methylase | - |
| AYP37_RS00155 () | 25395..25700 | - | 306 | WP_010891292.1 | hypothetical protein | - |
| AYP37_RS00160 () | 25704..26606 | - | 903 | WP_000273919.1 | DUF1281 domain-containing protein | - |
| AYP37_RS00175 () | 27301..28272 | - | 972 | WP_000817031.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| AYP37_RS00180 () | 28272..29438 | - | 1167 | WP_000772446.1 | Sporulation initiation inhibitor protein Soj | VF |
| AYP37_RS00185 () | 30026..30388 | - | 363 | Protein_31 | RepB family plasmid replication initiator protein | - |
| AYP37_RS00190 () | 30442..31655 | + | 1214 | WP_162829202.1 | IS3 family transposase IS1203 | Transposase |
| AYP37_RS00200 () | 32378..33184 | - | 807 | WP_000016989.1 | site-specific integrase | - |
| AYP37_RS00205 () | 33185..33490 | - | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| AYP37_RS00210 () | 33492..33710 | - | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| AYP37_RS00215 () | 34169..34852 | + | 684 | WP_010891291.1 | DNA-binding protein | - |
| AYP37_RS00220 () | 34849..35469 | + | 621 | WP_001248529.1 | hypothetical protein | - |
| AYP37_RS00225 () | 35466..35666 | + | 201 | WP_000708307.1 | hypothetical protein | - |
| AYP37_RS00235 () | 36074..37051 | + | 978 | WP_000361615.1 | RepB family plasmid replication initiator protein | - |
| AYP37_RS00240 () | 37336..38076 | - | 741 | WP_001066920.1 | IS91 family transposase ISMno23 | Transposase |
| AYP37_RS00245 () | 38197..38427 | - | 231 | WP_010891288.1 | hypothetical protein | - |
| AYP37_RS28540 () | 38558..39050 | - | 493 | Protein_42 | Transcriptional repressor MprA | VF |
| AYP37_RS00265 () | 39171..40610 | - | 1440 | WP_001213545.1 | Hemolysin secretion protein D, chromosomal | VF |
| AYP37_RS00270 () | 40614..42734 | - | 2121 | WP_000987091.1 | Alpha-hemolysin translocation ATP-binding protein HlyB | VF |
| AYP37_RS00275 () | 42784..45780 | - | 2997 | WP_000217733.1 | Hemolysin, chromosomal | VF |
| AYP37_RS00280 () | 45782..46297 | - | 516 | WP_000839950.1 | Hemolysin-activating lysine-acyltransferase HlyC | VF |
| AYP37_RS00290 () | 46838..48009 | - | 1172 | Protein_47 | IS3 family transposase ISLad1 | Transposase |
| AYP37_RS00300 () | 48188..48589 | - | 402 | WP_000971918.1 | GspS family T2SS pilot lipoprotein variant EptO | - |
| AYP37_RS00305 () | 48681..49514 | - | 834 | WP_000096786.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| AYP37_RS00310 () | 49572..50084 | - | 513 | WP_001004187.1 | Type II secretion system protein M | VF |
| AYP37_RS00315 () | 50071..51243 | - | 1173 | WP_071525076.1 | Type II secretion system protein L | VF |
| AYP37_RS00320 () | 51282..52259 | - | 978 | WP_000776550.1 | Putative type II secretion system protein K | VF |
| AYP37_RS00325 () | 52256..52855 | - | 600 | WP_000082782.1 | Type II secretion system protein J | VF |
| AYP37_RS00330 () | 52852..53199 | - | 348 | WP_000173396.1 | Type II secretion system protein I | VF |
| AYP37_RS00335 () | 53214..53768 | - | 555 | WP_000082929.1 | Putative type II secretion system protein H | VF |
| AYP37_RS00340 () | 53765..54199 | - | 435 | WP_001231211.1 | Type II secretion system protein G | VF |
| AYP37_RS00345 () | 54230..55453 | - | 1224 | WP_001173152.1 | Type II secretion system protein F | VF |
| AYP37_RS00350 () | 55455..56960 | - | 1506 | WP_000092338.1 | Type II secretion system protein E | VF |
| AYP37_RS00355 () | 56960..58927 | - | 1968 | WP_001302177.1 | Type II secretion system protein D | VF |
| AYP37_RS00360 () | 58928..59803 | - | 876 | WP_001302175.1 | Type II secretion system protein C | VF |
| AYP37_RS00365 () | 59890..62586 | - | 2697 | WP_001358886.1 | Metalloprotease StcE | VF |
| AYP37_RS00375 () | 63045..63131 | + | 87 | Protein_62 | IS3 family transposase ISEhe3 | Transposase |
| AYP37_RS00380 () | 63246..64784 | - | 1539 | WP_000998048.1 | IS66 family transposase ISEc8 | Transposase |
| AYP37_RS00385 () | 64834..65181 | - | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| AYP37_RS00390 () | 65178..65558 | - | 381 | WP_001171554.1 | IS66 family transposase ISEc8 | Transposase |
| AYP37_RS00395 () | 65685..65873 | - | 189 | Protein_66 | hypothetical protein | - |
| AYP37_RS00400 () | 65926..66924 | - | 999 | WP_001302181.1 | Lipid A biosynthesis myristoyltransferase | VF |
| AYP37_RS00405 () | 66998..68719 | - | 1722 | WP_000550559.1 | phosphoethanolamine transferase CptA | - |
| AYP37_RS00410 () | 68809..69915 | - | 1107 | WP_000975743.1 | glycosyltransferase family 4 protein | - |
| AYP37_RS00415 () | 69915..70736 | - | 822 | WP_001302199.1 | polysaccharide deacetylase family protein | - |
| AYP37_RS00425 () | 72177..72658 | + | 482 | Protein_71 | IS1 family transposase IS1N | Transposase |
| AYP37_RS00430 () | 72914..76816 | - | 3903 | WP_001034100.1 | Serine protease EspP | VF |
| AYP37_RS00440 () | 76997..77985 | - | 989 | Protein_73 | IS3 family transposase IS629 | Transposase |
| AYP37_RS00445 () | 78042..78431 | - | 390 | WP_001172748.1 | cytochrome b562 family protein | - |
| AYP37_RS00450 () | 78475..80685 | - | 2211 | WP_000592771.1 | Catalase-peroxidase | VF |
| AYP37_RS00455 () | 80862..81047 | + | 186 | WP_001302179.1 | hypothetical protein | - |
| AYP37_RS00460 () | 81047..81463 | + | 417 | Protein_77 | IS91 family transposase | - |
| AYP37_RS00465 () | 81463..82029 | + | 567 | Protein_78 | IS3 family transposase ISSd1 | Transposase |
| AYP37_RS00470 () | 82073..82288 | + | 216 | Protein_79 | transposase | - |
| AYP37_RS00475 () | 82388..82594 | - | 207 | WP_001105064.1 | hypothetical protein | - |
| AYP37_RS00480 () | 82689..82964 | - | 276 | WP_000421248.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| AYP37_RS00485 () | 82964..83248 | - | 285 | WP_001178089.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| AYP37_RS00500 () | 84159..85016 | - | 858 | WP_000130945.1 | incFII family plasmid replication initiator RepA | - |
| AYP37_RS00505 () | 85009..85083 | - | 75 | WP_001370046.1 | RepA leader peptide Tap | - |
| AYP37_RS00515 () | 85319..85573 | - | 255 | WP_000083831.1 | replication regulatory protein RepA | - |
| AYP37_RS00520 () | 85813..86151 | - | 339 | WP_000766796.1 | hypothetical protein | - |
| AYP37_RS00525 () | 86189..86398 | - | 210 | WP_001302200.1 | hemolysin expression modulator Hha | - |
| AYP37_RS00530 () | 86444..86905 | - | 462 | WP_001233856.1 | thermonuclease family protein | - |
| AYP37_RS00535 () | 87150..87362 | - | 213 | WP_001302189.1 | ANR family transcriptional regulator | - |
| AYP37_RS00540 () | 87495..88055 | - | 561 | WP_000840472.1 | fertility inhibition protein FinO | - |
| AYP37_RS00545 () | 88158..89018 | - | 861 | WP_000704522.1 | putative protein YcjY | VF |
| AYP37_RS00550 () | 89077..89823 | - | 747 | WP_000205762.1 | conjugal transfer pilus acetylase TraX | - |
| AYP37_RS00555 () | 89843..91231 | - | 1389 | Protein_93 | Multifunctional conjugation protein TraI | Relaxase |
| AYP37_RS00560 () | 91288..91539 | + | 252 | Protein_94 | IS3 family transposase IS1203 | Transposase |
| AYP37_RS00565 () | 91546..91716 | + | 171 | Protein_95 | IS3 family transposase IS1203 | Transposase |
| AYP37_RS00570 () | 91784..92008 | - | 225 | Protein_96 | IS3 family transposase IS3H | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|