MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 94987 bp
Accession: NZ_CP034795 Location: 1..94987 Organism: Escherichia coli strain 06-3462 Replicon: plasmid p06-3462
Accession: NZ_CP034795 Location: 1..94987 Organism: Escherichia coli strain 06-3462 Replicon: plasmid p06-3462
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A1D74_RS27695 () | 814..1116 | + | 303 | WP_077695738.1 | antirestriction protein | - |
| A1D74_RS27700 () | 1163..1585 | + | 423 | WP_000271685.1 | DUF1380 family protein | - |
| A1D74_RS27705 () | 1582..1773 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| A1D74_RS28535 () | 1743..2252 | - | 510 | WP_032245379.1 | hypothetical protein | - |
| A1D74_RS27720 () | 2769..2999 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| A1D74_RS27725 () | 3051..4412 | + | 1362 | WP_000199442.1 | DUF3560 domain-containing protein | - |
| A1D74_RS27730 () | 4459..5022 | + | 564 | WP_001302171.1 | class I SAM-dependent methyltransferase | - |
| A1D74_RS27735 () | 5108..5569 | - | 462 | WP_001304227.1 | hypothetical protein | - |
| A1D74_RS28540 () | 5639..5845 | + | 207 | WP_000547965.1 | hypothetical protein | - |
| A1D74_RS27745 () | 5871..6323 | + | 453 | WP_000290823.1 | single-stranded DNA-binding protein | - |
| A1D74_RS27750 () | 6380..6613 | + | 234 | WP_000005995.1 | DUF905 family protein | - |
| A1D74_RS27755 () | 6679..8637 | + | 1959 | WP_000117168.1 | ParB/RepB/Spo0J family partition protein | - |
| A1D74_RS27760 () | 8692..9126 | + | 435 | WP_000845908.1 | conjugation system SOS inhibitor PsiB | - |
| A1D74_RS27765 () | 9123..9884 | + | 762 | WP_001276250.1 | plasmid SOS inhibition protein A | - |
| - () | 9853..10051 | + | 199 | NuclAT_0 | - | - |
| - () | 9853..10051 | + | 199 | NuclAT_0 | - | - |
| - () | 9853..10051 | + | 199 | NuclAT_0 | - | - |
| - () | 9853..10051 | + | 199 | NuclAT_0 | - | - |
| A1D74_RS27770 () | 10116..10274 | + | 159 | WP_001302184.1 | type I toxin-antitoxin system Hok family toxin | - |
| A1D74_RS27775 () | 10408..12429 | + | 2022 | Protein_16 | relaxase/mobilization nuclease domain-containing protein | - |
| A1D74_RS27780 () | 12497..12928 | + | 432 | WP_001453090.1 | hypothetical protein | - |
| A1D74_RS27800 () | 14892..15241 | - | 350 | Protein_19 | IS3 family transposase | - |
| A1D74_RS27805 () | 15335..15598 | + | 264 | Protein_20 | IS21 family transposase | - |
| A1D74_RS27810 () | 15638..15758 | + | 121 | Protein_21 | ATP-binding protein | - |
| A1D74_RS27815 () | 15755..15907 | + | 153 | Protein_22 | IS1 family transposase | - |
| A1D74_RS27820 () | 16014..25523 | + | 9510 | WP_000581721.1 | toxin B | - |
| A1D74_RS27825 () | 25597..25821 | + | 225 | Protein_24 | IS3 family transposase | - |
| A1D74_RS27830 () | 25889..26059 | - | 171 | Protein_25 | ATP-binding protein | - |
| A1D74_RS27835 () | 26066..26317 | - | 252 | Protein_26 | transposase | - |
| A1D74_RS27840 () | 26374..27762 | + | 1389 | Protein_27 | conjugative transfer relaxase/helicase TraI | - |
| A1D74_RS27845 () | 27782..28528 | + | 747 | WP_000205762.1 | conjugal transfer pilus acetylase TraX | - |
| A1D74_RS27850 () | 28587..29447 | + | 861 | WP_000704522.1 | alpha/beta hydrolase | - |
| A1D74_RS27855 () | 29550..30110 | + | 561 | WP_000840472.1 | fertility inhibition protein FinO | - |
| A1D74_RS27860 () | 30243..30455 | + | 213 | WP_001302189.1 | ANR family transcriptional regulator | - |
| A1D74_RS27865 () | 30700..31161 | + | 462 | WP_001233856.1 | thermonuclease family protein | - |
| A1D74_RS27870 () | 31207..31416 | + | 210 | WP_001302200.1 | hemolysin expression modulator Hha | - |
| A1D74_RS27875 () | 31454..31792 | + | 339 | WP_000766796.1 | hypothetical protein | - |
| A1D74_RS27880 () | 32032..32286 | + | 255 | WP_000083831.1 | replication regulatory protein RepA | - |
| A1D74_RS27890 () | 32522..32596 | + | 75 | WP_001370046.1 | RepA leader peptide Tap | - |
| A1D74_RS27895 () | 32589..33446 | + | 858 | WP_000130945.1 | incFII family plasmid replication initiator RepA | - |
| A1D74_RS27910 () | 34358..34642 | + | 285 | WP_001178089.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| A1D74_RS27915 () | 34642..34917 | + | 276 | WP_000421248.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| A1D74_RS27920 () | 35012..35218 | + | 207 | WP_001105064.1 | hypothetical protein | - |
| A1D74_RS27925 () | 35318..35533 | - | 216 | Protein_41 | transposase | - |
| A1D74_RS27930 () | 35577..36143 | - | 567 | Protein_42 | IS3-like element IS600 family transposase | - |
| A1D74_RS27935 () | 36143..36559 | - | 417 | Protein_43 | IS91 family transposase | - |
| A1D74_RS27940 () | 36559..36744 | - | 186 | WP_001302179.1 | hypothetical protein | - |
| A1D74_RS27945 () | 36921..39131 | + | 2211 | WP_000592771.1 | catalase/peroxidase KatP | - |
| A1D74_RS27950 () | 39175..39564 | + | 390 | WP_001172748.1 | cytochrome b562 family protein | - |
| A1D74_RS27955 () | 39621..40609 | + | 989 | Protein_47 | IS3 family transposase | - |
| A1D74_RS27965 () | 40790..44692 | + | 3903 | WP_001034100.1 | serine protease autotransporter EspP | - |
| A1D74_RS27970 () | 44883..46096 | + | 1214 | WP_162829242.1 | IS3 family transposase | - |
| A1D74_RS27980 () | 46261..46742 | - | 482 | Protein_50 | IS1 family transposase | - |
| A1D74_RS27990 () | 48183..49004 | + | 822 | WP_001302199.1 | polysaccharide deacetylase family protein | - |
| A1D74_RS27995 () | 49004..50110 | + | 1107 | WP_000975743.1 | glycosyltransferase family 4 protein | - |
| A1D74_RS28000 () | 50200..51921 | + | 1722 | WP_000550559.1 | phosphoethanolamine transferase CptA | - |
| A1D74_RS28005 () | 51995..52993 | + | 999 | WP_001302181.1 | lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase | - |
| A1D74_RS28010 () | 53046..53234 | + | 189 | Protein_55 | hypothetical protein | - |
| A1D74_RS28015 () | 53361..53741 | + | 381 | WP_001171540.1 | IS66 family insertion sequence hypothetical protein | - |
| A1D74_RS28020 () | 53738..54085 | + | 348 | WP_000612591.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| A1D74_RS28025 () | 54135..55673 | + | 1539 | WP_000998048.1 | IS66-like element ISEc8 family transposase | - |
| A1D74_RS28030 () | 55788..55874 | - | 87 | Protein_59 | transposase | - |
| A1D74_RS28040 () | 56314..59010 | + | 2697 | WP_001358886.1 | metalloprotease StcE | - |
| A1D74_RS28045 () | 59097..59972 | + | 876 | WP_001302175.1 | type II secretion system protein GspC | - |
| A1D74_RS28050 () | 59973..61940 | + | 1968 | WP_001302177.1 | variant type II secretion system secretin EtpD | - |
| A1D74_RS28055 () | 61940..63445 | + | 1506 | WP_000092338.1 | type II secretion system ATPase GspE | - |
| A1D74_RS28060 () | 63447..64670 | + | 1224 | WP_001173152.1 | type II secretion system inner membrane protein GspF | - |
| A1D74_RS28065 () | 64701..65135 | + | 435 | WP_001231211.1 | type II secretion system major pseudopilin GspG | - |
| A1D74_RS28070 () | 65132..65686 | + | 555 | WP_000082929.1 | type II secretion system minor pseudopilin GspH | - |
| A1D74_RS28075 () | 65701..66048 | + | 348 | WP_000173396.1 | type II secretion system minor pseudopilin GspI | - |
| A1D74_RS28080 () | 66045..66644 | + | 600 | WP_000082782.1 | type II secretion system minor pseudopilin GspJ | - |
| A1D74_RS28085 () | 66641..67618 | + | 978 | WP_000776550.1 | type II secretion system minor pseudopilin GspK | - |
| A1D74_RS28090 () | 67657..68829 | + | 1173 | WP_071525076.1 | type II secretion system protein GspL | - |
| A1D74_RS28095 () | 68816..69328 | + | 513 | WP_001004187.1 | type II secretion system protein M | - |
| A1D74_RS28100 () | 69386..70219 | + | 834 | WP_000096786.1 | A24 family peptidase | - |
| A1D74_RS28105 () | 70311..70712 | + | 402 | WP_000971918.1 | GspS family T2SS pilot lipoprotein variant EptO | - |
| A1D74_RS28115 () | 70891..72062 | + | 1172 | Protein_74 | IS3 family transposase | - |
| A1D74_RS28125 () | 72603..73118 | + | 516 | WP_000839950.1 | enterohemolysin-activating lysine-acyltransferase EhxC | - |
| A1D74_RS28130 () | 73120..76116 | + | 2997 | WP_000217733.1 | enterohemolysin EhxA | - |
| A1D74_RS28135 () | 76166..78286 | + | 2121 | WP_000987091.1 | enterohemolysin T1SS ABC transporter permease/ATPase EhxB | - |
| A1D74_RS28140 () | 78290..79729 | + | 1440 | WP_001213545.1 | enterohemolysin T1SS ABC transporter subunit EhxD | - |
| A1D74_RS28545 () | 79850..80342 | + | 493 | Protein_79 | MarR family transcriptional regulator | - |
| A1D74_RS28160 () | 80473..80703 | + | 231 | WP_010891288.1 | hypothetical protein | - |
| A1D74_RS28165 () | 80824..81564 | + | 741 | WP_001066920.1 | tyrosine-type recombinase/integrase | - |
| A1D74_RS28170 () | 81849..82826 | - | 978 | WP_000361615.1 | RepB family plasmid replication initiator protein | - |
| A1D74_RS28180 () | 83234..83434 | - | 201 | WP_000708307.1 | hypothetical protein | - |
| A1D74_RS28185 () | 83431..84051 | - | 621 | WP_001248529.1 | hypothetical protein | - |
| A1D74_RS28190 () | 84048..84731 | - | 684 | WP_010891291.1 | DNA-binding protein | - |
| A1D74_RS28195 () | 85190..85408 | + | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| A1D74_RS28200 () | 85410..85715 | + | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| A1D74_RS28205 () | 85716..86522 | + | 807 | WP_000016989.1 | site-specific integrase | - |
| A1D74_RS28220 () | 89198..90364 | + | 1167 | WP_000772446.1 | plasmid-partitioning protein SopA | - |
| A1D74_RS28225 () | 90364..91335 | + | 972 | WP_000817031.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| A1D74_RS28240 () | 92030..92932 | + | 903 | WP_000273919.1 | DUF1281 domain-containing protein | - |
| A1D74_RS28245 () | 92936..93241 | + | 306 | WP_010891292.1 | hypothetical protein | - |
| A1D74_RS28250 () | 93318..94001 | + | 684 | WP_000085945.1 | DNA methylase | - |
| A1D74_RS28255 () | 94002..94223 | + | 222 | WP_001104869.1 | hypothetical protein | - |
| A1D74_RS28260 () | 94117..94671 | + | 555 | WP_001358893.1 | DUF1380 family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|