MGE detailed information
MGE type: Genomic_island MGE length: 9352 bp
Accession: NZ_CP034794 Location: 4962650..4972001 Organism: Escherichia coli strain 06-3462 Replicon: chromosome
Accession: NZ_CP034794 Location: 4962650..4972001 Organism: Escherichia coli strain 06-3462 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A1D74_RS25490 () | 4959381..4960100 | - | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
| A1D74_RS25495 () | 4960097..4961728 | - | 1632 | WP_001216477.1 | sensor histidine kinase | - |
| A1D74_RS25500 () | 4961909..4962139 | + | 231 | WP_000371704.1 | (4Fe-4S)-binding protein | - |
| A1D74_RS25505 () | 4962151..4962423 | + | 273 | WP_000405647.1 | N-acetyltransferase | - |
| A1D74_RS25510 () | 4962650..4962946 | + | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| A1D74_RS25515 () | 4962974..4963147 | + | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| A1D74_RS25520 () | 4963266..4964783 | - | 1518 | WP_001295074.1 | lysine--tRNA ligase | - |
| A1D74_RS25525 () | 4965020..4966477 | - | 1458 | WP_000856824.1 | dipeptide/tripeptide permease DtpC | - |
| A1D74_RS25530 () | 4966536..4968683 | - | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| A1D74_RS25535 () | 4968763..4970097 | - | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| A1D74_RS25545 () | 4970463..4972001 | - | 1539 | WP_001187177.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| A1D74_RS25555 () | 4972800..4973375 | - | 576 | WP_001188520.1 | transcriptional regulator | - |
| A1D74_RS25560 () | 4973412..4975109 | - | 1698 | WP_000068986.1 | protein-disulfide reductase DsbD | - |
| A1D74_RS25565 () | 4975085..4975423 | - | 339 | WP_000883400.1 | divalent cation tolerance protein CutA | - |
| A1D74_RS25570 () | 4975539..4976840 | - | 1302 | WP_000961959.1 | anaerobic C4-dicarboxylate transporter DcuA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20087 | HG738867 | 4238430..4247780 | 0.006 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21458 | NC_007779 | 4357262..4366612 | 0.006 | |
| Escherichia coli BW2952 | Genomic island | TA23874 | NC_012759 | 4289342..4298692 | 0.006 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285032 | NZ_HG738867 | 4238430..4247780 | 0.006 |