MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 95421 bp
Accession: NZ_CP034793 Location: 1..95421 Organism: Escherichia coli strain 2009C-3378 Replicon: plasmid p2009C-3378
Accession: NZ_CP034793 Location: 1..95421 Organism: Escherichia coli strain 2009C-3378 Replicon: plasmid p2009C-3378
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DR788_RS27555 () | 51..320 | - | 270 | WP_001241949.1 | RepB family plasmid replication initiator protein | - |
| DR788_RS27560 () | 377..1590 | + | 1214 | WP_162829240.1 | IS3 family transposase IS1203 | Transposase |
| DR788_RS27570 () | 2313..3119 | - | 807 | WP_000016989.1 | site-specific integrase | - |
| DR788_RS27575 () | 3120..3419 | - | 300 | WP_027868286.1 | type II toxin-antitoxin system toxin CcdB | - |
| DR788_RS27580 () | 3473..4686 | + | 1214 | WP_162829348.1 | IS3 family transposase IS629 | Transposase |
| DR788_RS27590 () | 4740..4958 | - | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | - |
| DR788_RS27595 () | 5417..6100 | + | 684 | WP_010891291.1 | DNA-binding protein | - |
| DR788_RS27600 () | 6097..6717 | + | 621 | WP_001248529.1 | hypothetical protein | - |
| DR788_RS27605 () | 6714..6914 | + | 201 | WP_000708307.1 | hypothetical protein | - |
| DR788_RS27615 () | 7322..8299 | + | 978 | WP_000361615.1 | RepB family plasmid replication initiator protein | - |
| DR788_RS27620 () | 8584..9324 | - | 741 | WP_001066920.1 | IS91 family transposase ISMno23 | Transposase |
| DR788_RS27625 () | 9445..9675 | - | 231 | WP_010891288.1 | hypothetical protein | - |
| DR788_RS28435 () | 9806..10298 | - | 493 | Protein_12 | Transcriptional repressor MprA | VF |
| DR788_RS27645 () | 10419..11858 | - | 1440 | WP_001213542.1 | Hemolysin secretion protein D, chromosomal | VF |
| DR788_RS27650 () | 11862..13982 | - | 2121 | WP_000987091.1 | Alpha-hemolysin translocation ATP-binding protein HlyB | VF |
| DR788_RS27655 () | 14032..17028 | - | 2997 | WP_000217733.1 | Hemolysin, chromosomal | VF |
| DR788_RS27660 () | 17030..17545 | - | 516 | WP_000839950.1 | Hemolysin-activating lysine-acyltransferase HlyC | VF |
| DR788_RS27670 () | 18086..19257 | - | 1172 | Protein_17 | IS3 family transposase ISLad1 | Transposase |
| DR788_RS27680 () | 19436..19837 | - | 402 | WP_000971918.1 | GspS family T2SS pilot lipoprotein variant EptO | - |
| DR788_RS27685 () | 19929..20762 | - | 834 | WP_000096786.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| DR788_RS27690 () | 20820..21332 | - | 513 | WP_001004187.1 | Type II secretion system protein M | VF |
| DR788_RS27695 () | 21319..22491 | - | 1173 | WP_071525076.1 | Type II secretion system protein L | VF |
| DR788_RS27700 () | 22530..23507 | - | 978 | WP_000776550.1 | Putative type II secretion system protein K | VF |
| DR788_RS27705 () | 23504..24103 | - | 600 | WP_000082782.1 | Type II secretion system protein J | VF |
| DR788_RS27710 () | 24100..24447 | - | 348 | WP_000173396.1 | Type II secretion system protein I | VF |
| DR788_RS27715 () | 24462..25016 | - | 555 | WP_000082929.1 | Putative type II secretion system protein H | VF |
| DR788_RS27720 () | 25013..25447 | - | 435 | WP_001231211.1 | Type II secretion system protein G | VF |
| DR788_RS27725 () | 25478..26701 | - | 1224 | WP_001173152.1 | Type II secretion system protein F | VF |
| DR788_RS27730 () | 26703..28208 | - | 1506 | WP_000092338.1 | Type II secretion system protein E | VF |
| DR788_RS27735 () | 28208..30175 | - | 1968 | WP_001302177.1 | Type II secretion system protein D | VF |
| DR788_RS27740 () | 30176..31051 | - | 876 | WP_001302175.1 | Type II secretion system protein C | VF |
| DR788_RS27745 () | 31138..33834 | - | 2697 | WP_001358886.1 | Metalloprotease StcE | VF |
| DR788_RS27760 () | 34291..34377 | + | 87 | Protein_32 | IS3 family transposase ISEhe3 | Transposase |
| DR788_RS27765 () | 34492..36030 | - | 1539 | WP_000998042.1 | IS66 family transposase ISEc8 | Transposase |
| DR788_RS27770 () | 36080..36427 | - | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| DR788_RS27775 () | 36424..36804 | - | 381 | WP_001171540.1 | IS66 family transposase ISEc8 | Transposase |
| DR788_RS27780 () | 36931..37119 | - | 189 | Protein_36 | hypothetical protein | - |
| DR788_RS27785 () | 37172..38170 | - | 999 | WP_001302181.1 | Lipid A biosynthesis myristoyltransferase | VF |
| DR788_RS27790 () | 38244..39965 | - | 1722 | WP_000550559.1 | phosphoethanolamine transferase CptA | - |
| DR788_RS27795 () | 40055..41161 | - | 1107 | WP_000975743.1 | glycosyltransferase family 4 protein | - |
| DR788_RS27800 () | 41161..41982 | - | 822 | WP_001302199.1 | polysaccharide deacetylase family protein | - |
| DR788_RS27810 () | 43424..43905 | + | 482 | Protein_41 | IS1 family transposase IS1N | Transposase |
| DR788_RS27820 () | 45474..49376 | - | 3903 | WP_001034100.1 | Serine protease EspP | VF |
| DR788_RS27830 () | 49557..50545 | - | 989 | Protein_44 | IS3 family transposase IS629 | Transposase |
| DR788_RS27835 () | 50602..50991 | - | 390 | WP_001172748.1 | cytochrome b562 family protein | - |
| DR788_RS27840 () | 51035..53245 | - | 2211 | WP_000592771.1 | Catalase-peroxidase | VF |
| DR788_RS27845 () | 53422..53607 | + | 186 | WP_001302179.1 | hypothetical protein | - |
| DR788_RS27850 () | 53607..54023 | + | 417 | Protein_48 | IS91 family transposase | - |
| DR788_RS27855 () | 54023..54589 | + | 567 | Protein_49 | IS3 family transposase ISSd1 | Transposase |
| DR788_RS27860 () | 54633..54848 | + | 216 | Protein_50 | transposase | - |
| DR788_RS27865 () | 54948..55154 | - | 207 | WP_001105064.1 | hypothetical protein | - |
| DR788_RS27870 () | 55249..55524 | - | 276 | WP_000421248.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| DR788_RS27875 () | 55524..55808 | - | 285 | WP_001178089.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| DR788_RS27890 () | 56721..57578 | - | 858 | WP_000130945.1 | incFII family plasmid replication initiator RepA | - |
| DR788_RS27895 () | 57571..57645 | - | 75 | WP_001370046.1 | RepA leader peptide Tap | - |
| DR788_RS27905 () | 57881..58135 | - | 255 | WP_000083831.1 | replication regulatory protein RepA | - |
| DR788_RS27910 () | 58375..58713 | - | 339 | WP_000766796.1 | hypothetical protein | - |
| DR788_RS27915 () | 58751..58960 | - | 210 | WP_001302200.1 | hemolysin expression modulator Hha | - |
| DR788_RS27920 () | 59006..59467 | - | 462 | WP_001233856.1 | thermonuclease family protein | - |
| DR788_RS27925 () | 59712..59924 | - | 213 | WP_001302189.1 | ANR family transcriptional regulator | - |
| DR788_RS27930 () | 60057..60617 | - | 561 | WP_000840472.1 | fertility inhibition protein FinO | - |
| DR788_RS27935 () | 60720..61580 | - | 861 | WP_000704522.1 | putative protein YcjY | VF |
| DR788_RS27940 () | 61639..62385 | - | 747 | WP_000205762.1 | conjugal transfer pilus acetylase TraX | - |
| DR788_RS27945 () | 62405..63793 | - | 1389 | Protein_64 | Multifunctional conjugation protein TraI | Relaxase |
| DR788_RS27950 () | 63850..64101 | + | 252 | Protein_65 | IS3 family transposase IS1203 | Transposase |
| DR788_RS27955 () | 64108..64278 | + | 171 | Protein_66 | IS3 family transposase IS1203 | Transposase |
| DR788_RS27960 () | 64346..64570 | - | 225 | Protein_67 | IS3 family transposase IS3H | Transposase |
| DR788_RS27965 () | 64644..74153 | - | 9510 | WP_000581721.1 | Toxin B | VF |
| DR788_RS27970 () | 74260..74412 | - | 153 | Protein_69 | IS1 family transposase | - |
| DR788_RS27975 () | 74409..74529 | - | 121 | Protein_70 | IS21 family transposase ISEc62 | Transposase |
| DR788_RS27980 () | 74569..74832 | - | 264 | Protein_71 | IS21 family transposase ISEc62 | Transposase |
| DR788_RS27985 () | 74926..75275 | + | 350 | Protein_72 | IS3 family transposase IS3H | Transposase |
| DR788_RS27995 () | 75940..76371 | - | 432 | WP_001453090.1 | hypothetical protein | - |
| DR788_RS28000 () | 76439..78460 | - | 2022 | Protein_74 | hypothetical protein | Relaxase |
| DR788_RS28005 () | 78594..78752 | - | 159 | WP_001302184.1 | type I toxin-antitoxin system Hok family toxin | - |
| - () | 78817..79015 | - | 199 | NuclAT_0 | - | - |
| - () | 78817..79015 | - | 199 | NuclAT_0 | - | - |
| - () | 78817..79015 | - | 199 | NuclAT_0 | - | - |
| - () | 78817..79015 | - | 199 | NuclAT_0 | - | - |
| DR788_RS28010 () | 78984..79745 | - | 762 | WP_001276250.1 | plasmid SOS inhibition protein A | - |
| DR788_RS28015 () | 79742..80176 | - | 435 | WP_000845908.1 | conjugation system SOS inhibitor PsiB | - |
| DR788_RS28020 () | 80231..82189 | - | 1959 | WP_000117168.1 | ParB/RepB/Spo0J family partition protein | - |
| DR788_RS28025 () | 82255..82488 | - | 234 | WP_000005995.1 | DUF905 family protein | - |
| DR788_RS28030 () | 82545..82997 | - | 453 | WP_000290823.1 | single-stranded DNA-binding protein | - |
| DR788_RS28440 () | 83023..83229 | - | 207 | WP_000547965.1 | hypothetical protein | - |
| DR788_RS28040 () | 83299..83754 | + | 456 | WP_001358896.1 | hypothetical protein | - |
| DR788_RS28045 () | 83840..84403 | - | 564 | WP_001302171.1 | class I SAM-dependent methyltransferase | - |
| DR788_RS28050 () | 84450..85811 | - | 1362 | WP_000199442.1 | DUF3560 domain-containing protein | - |
| DR788_RS28055 () | 85863..86093 | - | 231 | WP_000218642.1 | hypothetical protein | - |
| DR788_RS28445 () | 86610..87119 | + | 510 | WP_032245379.1 | hypothetical protein | - |
| DR788_RS28070 () | 87089..87280 | - | 192 | WP_001027495.1 | hypothetical protein | - |
| DR788_RS28075 () | 87277..87699 | - | 423 | WP_000271685.1 | DUF1380 family protein | - |
| DR788_RS28080 () | 87746..88048 | - | 303 | WP_010891293.1 | antirestriction protein | - |
| DR788_RS28450 () | 88589..89365 | - | 777 | WP_001005037.1 | hypothetical protein | - |
| DR788_RS28095 () | 89411..89965 | - | 555 | WP_001358893.1 | DUF1380 family protein | - |
| DR788_RS28100 () | 89859..90080 | - | 222 | WP_001104869.1 | hypothetical protein | - |
| DR788_RS28105 () | 90081..90764 | - | 684 | WP_000085945.1 | DNA methylase | - |
| DR788_RS28110 () | 90841..91146 | - | 306 | WP_010891292.1 | hypothetical protein | - |
| DR788_RS28115 () | 91150..92052 | - | 903 | WP_000273919.1 | DUF1281 domain-containing protein | - |
| DR788_RS28130 () | 92747..93718 | - | 972 | WP_000817031.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| DR788_RS28135 () | 93718..94884 | - | 1167 | WP_000772446.1 | Sporulation initiation inhibitor protein Soj | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|