MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 47564 bp
Accession: NZ_CP034781 Location: 1..47564 Organism: Pseudomonas sp. MPC6 Replicon: plasmid pMPC6-47K
Accession: NZ_CP034781 Location: 1..47564 Organism: Pseudomonas sp. MPC6 Replicon: plasmid pMPC6-47K
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ELQ88_RS00030 () | 555..872 | - | 318 | WP_138962766.1 | hypothetical protein | - |
| ELQ88_RS00035 () | 902..1858 | - | 957 | WP_138962768.1 | Type IV secretion system protein virB1 | VF |
| ELQ88_RS00040 () | 1842..2870 | - | 1029 | WP_130932305.1 | Type IV secretion system protein VirB11 | VF |
| ELQ88_RS00045 () | 2880..4154 | - | 1275 | WP_138962770.1 | Type IV secretion system protein PtlG | VF |
| ELQ88_RS00050 () | 4157..4936 | - | 780 | WP_016715823.1 | Type IV secretion system protein virB9 | VF |
| ELQ88_RS00055 () | 4962..5627 | - | 666 | WP_016715822.1 | type IV secretion system protein | - |
| ELQ88_RS00060 () | 5627..6487 | - | 861 | WP_138962772.1 | type IV secretion system protein | - |
| ELQ88_RS00065 () | 6475..6864 | - | 390 | WP_016715820.1 | hypothetical protein | - |
| ELQ88_RS00070 () | 6857..7069 | - | 213 | WP_016715819.1 | hypothetical protein | - |
| ELQ88_RS00075 () | 7099..7776 | - | 678 | WP_016715818.1 | hypothetical protein | - |
| ELQ88_RS00080 () | 7785..10469 | - | 2685 | WP_138962774.1 | Type IV secretion system protein virB4 | VF |
| ELQ88_RS00085 () | 10456..10755 | - | 300 | WP_029380362.1 | VirB3 family type IV secretion system protein | - |
| ELQ88_RS00090 () | 10752..11213 | - | 462 | WP_080578144.1 | TrbC/VirB2 family protein | - |
| ELQ88_RS00100 () | 12192..12959 | + | 768 | WP_016715814.1 | ParA family protein | - |
| ELQ88_RS00105 () | 12970..13893 | + | 924 | WP_138962776.1 | ParB/RepB/Spo0J family partition protein | - |
| ELQ88_RS00110 () | 13890..14240 | + | 351 | WP_130906392.1 | ParR | - |
| ELQ88_RS00115 () | 14436..14684 | + | 249 | WP_016715809.1 | hypothetical protein | - |
| ELQ88_RS00120 () | 14827..15459 | + | 633 | WP_138962778.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| ELQ88_RS00125 () | 15950..16501 | + | 552 | WP_134939437.1 | helix-turn-helix domain-containing protein | - |
| ELQ88_RS00130 () | 16970..19975 | + | 3006 | WP_138962780.1 | type I restriction endonuclease subunit R | - |
| ELQ88_RS00135 () | 19968..21281 | + | 1314 | WP_138962782.1 | restriction endonuclease subunit S | - |
| ELQ88_RS00140 () | 21278..22477 | + | 1200 | WP_138962784.1 | AAA family ATPase | - |
| ELQ88_RS00145 () | 22474..24096 | + | 1623 | WP_138962786.1 | type I restriction-modification system subunit M | - |
| ELQ88_RS00150 () | 24728..25561 | + | 834 | WP_106117669.1 | DUF945 domain-containing protein | - |
| ELQ88_RS00155 () | 25616..26074 | + | 459 | WP_138962788.1 | hypothetical protein | - |
| ELQ88_RS00160 () | 26127..26429 | + | 303 | WP_138962790.1 | hypothetical protein | - |
| ELQ88_RS00165 () | 26478..26771 | - | 294 | WP_016715864.1 | putative addiction module antidote protein | Antitoxin Detail |
| ELQ88_RS00170 () | 26768..27070 | - | 303 | WP_016715863.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| ELQ88_RS00175 () | 27248..27427 | + | 180 | WP_138962792.1 | hypothetical protein | - |
| ELQ88_RS00180 () | 27487..27939 | + | 453 | WP_138962794.1 | hypothetical protein | - |
| ELQ88_RS00190 () | 28796..29668 | - | 873 | WP_027618234.1 | oxaloacetate decarboxylase | - |
| ELQ88_RS00195 () | 29923..30531 | - | 609 | WP_027618235.1 | L(+)-tartrate dehydratase subunit beta | - |
| ELQ88_RS00200 () | 30528..31427 | - | 900 | WP_027618236.1 | L(+)-tartrate dehydratase subunit alpha | - |
| ELQ88_RS00205 () | 31958..32869 | + | 912 | WP_027618237.1 | HTH-type transcriptional regulator DmlR | VF |
| ELQ88_RS00210 () | 32931..34280 | - | 1350 | WP_027618238.1 | dicarboxylate/amino acid:cation symporter | - |
| ELQ88_RS00215 () | 34377..35435 | - | 1059 | WP_027618239.1 | tartrate dehydrogenase | - |
| ELQ88_RS00225 () | 36808..37050 | - | 243 | WP_138962800.1 | hypothetical protein | - |
| ELQ88_RS00230 () | 37109..37891 | - | 783 | WP_138962802.1 | SprT-like domain-containing protein | - |
| ELQ88_RS00235 () | 38024..38416 | - | 393 | WP_138962805.1 | hypothetical protein | - |
| ELQ88_RS00240 () | 38422..39144 | - | 723 | WP_138962807.1 | plasmid stabilization protein | - |
| ELQ88_RS00245 () | 39141..39587 | - | 447 | WP_138962809.1 | TraD protein | - |
| ELQ88_RS00250 () | 40017..40403 | + | 387 | WP_138962811.1 | hypothetical protein | - |
| ELQ88_RS00255 () | 40403..41953 | + | 1551 | WP_138962813.1 | type IV secretion system DNA-binding domain-containing protein | - |
| ELQ88_RS00260 () | 41965..44934 | + | 2970 | WP_138962815.1 | Multifunctional conjugation protein TraI | Relaxase |
| ELQ88_RS00265 () | 45346..46035 | + | 690 | WP_138962821.1 | DNA-binding protein | - |
| ELQ88_RS00270 () | 46320..46838 | + | 519 | WP_138962823.1 | hypothetical protein | - |
| ELQ88_RS00275 () | 46915..47544 | - | 630 | WP_138962817.1 | nuclease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|