MGE detailed information
MGE type: IScluster/Tn MGE length: 42970 bp
Accession: NZ_CP034659 Location: 74292..117261 Organism: Escherichia coli strain ATCC 98082 Replicon: plasmid unnamed
Accession: NZ_CP034659 Location: 74292..117261 Organism: Escherichia coli strain ATCC 98082 Replicon: plasmid unnamed
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EKH78_RS22575 (EKH78_22755) | 69669..69932 | - | 264 | WP_009310051.1 | hypothetical protein | - |
| EKH78_RS22580 (EKH78_22760) | 70246..70425 | + | 180 | WP_004118349.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| EKH78_RS24815 (EKH78_22770) | 70547..70709 | + | 163 | Protein_79 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| EKH78_RS22590 (EKH78_22775) | 70889..71323 | - | 435 | WP_000723072.1 | hypothetical protein | - |
| EKH78_RS22595 (EKH78_22780) | 71541..72449 | - | 909 | WP_285896656.1 | heavy metal sensor histidine kinase | - |
| EKH78_RS22600 (EKH78_22790) | 72459..73163 | - | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| EKH78_RS22605 (EKH78_22795) | 73227..73508 | + | 282 | Protein_83 | ddrB domain protein | - |
| EKH78_RS22610 (EKH78_22800) | 73498..73806 | + | 309 | WP_060615954.1 | hypothetical protein | - |
| EKH78_RS22615 (EKH78_22810) | 73964..74650 | + | 687 | Protein_85 | IS1 family transposase | - |
| EKH78_RS22625 (EKH78_22820) | 76252..77364 | + | 1113 | WP_112921217.1 | porin OmpC | - |
| EKH78_RS22630 (EKH78_22825) | 77626..78606 | + | 981 | WP_215424895.1 | IS5 family transposase IS5D | Transposase |
| EKH78_RS22635 (EKH78_22835) | 79095..79808 | - | 714 | WP_032177722.1 | SprT family zinc-dependent metalloprotease | - |
| EKH78_RS22640 (EKH78_22840) | 79808..82585 | - | 2778 | WP_202205987.1 | type I restriction endonuclease subunit R | - |
| EKH78_RS24820 | 82585..82671 | + | 87 | Protein_91 | hypothetical protein | - |
| EKH78_RS22645 (EKH78_22845) | 82668..83321 | + | 654 | Protein_92 | IS30 family transposase IS30D | Transposase |
| EKH78_RS22650 (EKH78_22850) | 83363..84898 | - | 1536 | WP_001000409.1 | IS66 family transposase ISSgsp1 | Transposase |
| EKH78_RS22655 (EKH78_22855) | 84948..85241 | - | 294 | WP_050542499.1 | IS66 family transposase ISCfr14 | Transposase |
| EKH78_RS22660 (EKH78_22860) | 85310..86014 | + | 705 | WP_009364894.1 | IS6 family transposase IS26 | Transposase |
| EKH78_RS22665 (EKH78_22870) | 86168..86344 | + | 177 | Protein_96 | DUF2254 domain-containing protein | - |
| EKH78_RS22670 (EKH78_22875) | 86408..87112 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| EKH78_RS22675 (EKH78_22880) | 87160..87351 | + | 192 | Protein_98 | helix-turn-helix domain-containing protein | - |
| EKH78_RS22680 (EKH78_22885) | 87449..87865 | - | 417 | WP_088765932.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| EKH78_RS22685 (EKH78_22890) | 87862..88092 | - | 231 | WP_001261282.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| EKH78_RS22690 (EKH78_22895) | 88049..88510 | + | 462 | WP_162535865.1 | hypothetical protein | - |
| EKH78_RS22695 (EKH78_22900) | 88654..89004 | + | 351 | WP_000493399.1 | hypothetical protein | - |
| EKH78_RS25000 | 89048..89170 | + | 123 | WP_257606738.1 | hypothetical protein | - |
| EKH78_RS22700 (EKH78_22905) | 89164..89961 | - | 798 | WP_000544830.1 | IS21 family transposase IS21 | Transposase |
| EKH78_RS22705 (EKH78_22910) | 89961..91133 | - | 1173 | WP_042111630.1 | IS21 family transposase IS21 | Transposase |
| EKH78_RS22710 (EKH78_22915) | 91219..91398 | + | 180 | Protein_106 | hypothetical protein | - |
| EKH78_RS22715 (EKH78_22925) | 91450..92161 | - | 712 | Protein_107 | IS6-like element IS26 family transposase | - |
| EKH78_RS22720 (EKH78_22935) | 92230..92670 | + | 441 | Protein_108 | ISNCY family transposase ISKpn21 | Transposase |
| EKH78_RS22725 (EKH78_22940) | 92913..93776 | - | 864 | WP_000902059.1 | toll/interleukin-1 receptor domain-containing protein | - |
| EKH78_RS22730 (EKH78_22945) | 93793..94218 | - | 426 | WP_024198578.1 | hypothetical protein | - |
| EKH78_RS22735 (EKH78_22950) | 94521..95045 | - | 525 | Protein_111 | IS5 family transposase ISKpn26 | Transposase |
| EKH78_RS22740 (EKH78_22955) | 95081..96520 | - | 1440 | Protein_112 | IS66 family transposase ISKox1 | Transposase |
| EKH78_RS22745 (EKH78_22960) | 96585..97289 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| EKH78_RS22750 (EKH78_22965) | 97361..97849 | + | 489 | Protein_114 | IS110 family transposase ISKpn2 | Transposase |
| EKH78_RS22755 (EKH78_22970) | 98075..98188 | - | 114 | Protein_115 | IS3 family transposase ISSen4 | Transposase |
| EKH78_RS22760 (EKH78_22980) | 98458..99411 | + | 954 | WP_001198018.1 | cation diffusion facilitator family transporter | - |
| EKH78_RS22765 (EKH78_22985) | 99636..100019 | + | 384 | WP_001201739.1 | IS66 family transposase IS682 | Transposase |
| EKH78_RS22770 (EKH78_22990) | 100016..100363 | + | 348 | WP_000609174.1 | IS66 family transposase ISCfr14 | Transposase |
| EKH78_RS22775 (EKH78_22995) | 100413..101948 | + | 1536 | WP_001000409.1 | IS66 family transposase ISSgsp1 | Transposase |
| EKH78_RS22780 (EKH78_23000) | 101991..102449 | + | 459 | Protein_120 | IS3 family transposase ISCfr6 | Transposase |
| EKH78_RS22785 (EKH78_23005) | 102645..103121 | - | 477 | WP_000043177.1 | hypothetical protein | VF |
| EKH78_RS24825 (EKH78_23010) | 103236..103586 | - | 351 | WP_023135766.1 | PaaI family thioesterase | - |
| EKH78_RS22795 (EKH78_23015) | 103834..104295 | - | 462 | WP_000626969.1 | NifB/NifX family molybdenum-iron cluster-binding protein | - |
| EKH78_RS22800 (EKH78_23020) | 104270..104590 | - | 321 | WP_001137910.1 | DUF134 domain-containing protein | - |
| EKH78_RS22805 (EKH78_23025) | 105050..106054 | - | 1005 | WP_000427614.1 | IS110 family transposase IS5075 | Transposase |
| EKH78_RS22810 (EKH78_23030) | 106242..106850 | + | 609 | WP_000379506.1 | TetR/AcrR family transcriptional regulator | - |
| EKH78_RS22815 (EKH78_23035) | 106847..107998 | + | 1152 | WP_016236501.1 | efflux RND transporter periplasmic adaptor subunit | - |
| EKH78_RS22820 (EKH78_23040) | 107995..109200 | + | 1206 | WP_000624215.1 | ABC transporter permease | - |
| EKH78_RS22825 (EKH78_23045) | 109202..109912 | + | 711 | WP_004393997.1 | Lipoprotein-releasing system ATP-binding protein LolD | VF |
| EKH78_RS22830 (EKH78_23050) | 109941..110414 | + | 474 | WP_016236502.1 | cytochrome c | - |
| EKH78_RS22835 (EKH78_23060) | 110629..111333 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| EKH78_RS22840 (EKH78_23065) | 111497..112518 | + | 1022 | Protein_132 | IS110 family transposase IS1618 | Transposase |
| EKH78_RS22845 (EKH78_23070) | 113564..113893 | + | 330 | WP_000493286.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| EKH78_RS22850 (EKH78_23075) | 113874..114155 | + | 282 | WP_000780222.1 | helix-turn-helix transcriptional regulator | - |
| EKH78_RS22855 (EKH78_23080) | 114499..115413 | + | 915 | WP_149022717.1 | IS5 family transposase ISKpn26 | Transposase |
| EKH78_RS22860 (EKH78_23085) | 115730..116230 | - | 501 | WP_001752509.1 | non-heme ferritin-like protein | - |
| EKH78_RS22865 (EKH78_23090) | 116557..117261 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| EKH78_RS22870 (EKH78_23095) | 117336..118247 | - | 912 | WP_000545589.1 | mechanosensitive ion channel family protein | - |
| EKH78_RS22875 (EKH78_23100) | 118430..119005 | - | 576 | Protein_139 | hypothetical protein | - |
| EKH78_RS22880 (EKH78_23105) | 119085..119696 | - | 612 | WP_021567660.1 | heat resistance membrane protein HdeD-GI | - |
| EKH78_RS22885 (EKH78_23110) | 119786..120673 | - | 888 | WP_044723187.1 | heat resistance protein YfdX2 | - |
| EKH78_RS22890 (EKH78_23115) | 120776..121684 | - | 909 | WP_021567662.1 | heat resistance protein YfdX1 | - |
| EKH78_RS22895 (EKH78_23120) | 121706..122164 | - | 459 | WP_023205562.1 | small heat shock protein sHSP20-GI | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|