MGE detailed information
MGE type: Prophage MGE length: 34056 bp
Accession: NZ_CP034658 Location: 1586560..1620615 Organism: Escherichia coli strain ATCC 98082 Replicon: chromosome
Accession: NZ_CP034658 Location: 1586560..1620615 Organism: Escherichia coli strain ATCC 98082 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EKH78_RS07615 (1582334) | 1582334..1583449 | + | 1116 | WP_000258599.1 | putative protein YneK | - |
| EKH78_RS07620 (1583599) | 1583599..1584789 | + | 1191 | WP_000210799.1 | L-arabinose MFS transporter | - |
| EKH78_RS07625 (1584814) | 1584814..1585479 | - | 666 | WP_000885033.1 | NAAT family transporter MarC | - |
| EKH78_RS07630 (1585691) | 1585691..1586125 | + | 435 | WP_000843414.1 | multiple antibiotic resistance transcriptional regulator MarR | - |
| EKH78_RS07635 (1586145) | 1586145..1586528 | + | 384 | WP_000091199.1 | MDR efflux pump AcrAB transcriptional activator MarA | - |
| EKH78_RS07640 (1586560) | 1586560..1586778 | + | 219 | WP_000803657.1 | multiple antibiotic resistance protein MarB | - |
| EKH78_RS07645 (1586809) | 1586809..1587708 | - | 900 | WP_000087187.1 | O-acetylserine/cysteine exporter | - |
| EKH78_RS07650 (1587903) | 1587903..1589090 | + | 1188 | WP_001054204.1 | efflux MFS transporter YdeE | - |
| EKH78_RS07655 (1589217) | 1589217..1589312 | + | 96 | WP_000901367.1 | protein MgtS | - |
| EKH78_RS24620 (1589312) | 1589312..1589416 | + | 105 | WP_211180496.1 | protein MgtT | - |
| EKH78_RS07660 (1589531) | 1589531..1590421 | - | 891 | WP_000592814.1 | diguanylate cyclase DgcZ | - |
| EKH78_RS07665 (1590676) | 1590676..1591068 | - | 393 | WP_000671737.1 | YdeI family stress tolerance OB fold protein | - |
| EKH78_RS07670 (1591344) | 1591344..1591862 | + | 519 | WP_001024746.1 | 2-oxo-tetronate isomerase | - |
| EKH78_RS07675 (1591906) | 1591906..1593951 | - | 2046 | WP_000210373.1 | peptidyl-dipeptidase Dcp | - |
| EKH78_RS07680 (1594088) | 1594088..1594834 | + | 747 | WP_000636571.1 | 3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase | VF |
| EKH78_RS07685 (1594923) | 1594923..1595609 | + | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| EKH78_RS07690 (1595786) | 1595786..1595989 | + | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| EKH78_RS07695 (1596024) | 1596024..1596215 | - | 192 | Protein_1524 | D-mannonate oxidoreductase | - |
| EKH78_RS07705 (1597546) | 1597546..1598820 | - | 1275 | Protein_1526 | mannitol dehydrogenase family protein | - |
| EKH78_RS07710 (1598909) | 1598909..1600276 | - | 1368 | Protein_1527 | MHS family MFS transporter | - |
| EKH78_RS07715 (1600797) | 1600797..1600910 | + | 114 | WP_120795384.1 | YnaM/YnfT family protein | - |
| EKH78_RS07720 (1600979) | 1600979..1601212 | + | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| EKH78_RS07725 (1601529) | 1601529..1602119 | + | 591 | WP_000078177.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| EKH78_RS07730 (1602217) | 1602217..1602792 | - | 576 | WP_000885611.1 | tail fiber assembly protein | - |
| EKH78_RS07735 (1602792) | 1602792..1603754 | - | 963 | WP_001027733.1 | phage tail protein | - |
| EKH78_RS07740 (1603705) | 1603705..1604274 | - | 570 | WP_000453612.1 | DNA-packaging protein | - |
| EKH78_RS07745 (1604663) | 1604663..1604896 | + | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| EKH78_RS07750 (1604954) | 1604954..1605364 | + | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| EKH78_RS07755 (1605516) | 1605516..1605689 | - | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| EKH78_RS07760 (1605861) | 1605861..1606016 | - | 156 | WP_001309517.1 | protein YnfN | - |
| EKH78_RS07765 (1606095) | 1606095..1606160 | - | 66 | WP_120795388.1 | small protein YnfR | - |
| EKH78_RS07770 (1606163) | 1606163..1606351 | - | 189 | WP_071524604.1 | cold-shock protein | - |
| EKH78_RS07775 (1606362) | 1606362..1606574 | - | 213 | WP_000066495.1 | cold shock protein CspI | - |
| EKH78_RS07780 (1606937) | 1606937..1607434 | - | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| EKH78_RS07785 (1607431) | 1607431..1607964 | - | 534 | WP_001092971.1 | lysozyme | - |
| EKH78_RS07790 (1607961) | 1607961..1608272 | - | 312 | WP_000189916.1 | YdfR family protein | - |
| EKH78_RS07795 (1608277) | 1608277..1608492 | - | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| EKH78_RS24625 (1608712) | 1608712..1608882 | + | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| EKH78_RS07800 (1609246) | 1609246..1609461 | - | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| EKH78_RS07805 (1609762) | 1609762..1609974 | + | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| EKH78_RS07810 (1610029) | 1610029..1610118 | + | 90 | WP_120795389.1 | hypothetical protein | - |
| EKH78_RS07815 (1610396) | 1610396..1611148 | - | 753 | WP_001047135.1 | antitermination protein | - |
| EKH78_RS07820 (1611162) | 1611162..1612211 | - | 1050 | WP_001265198.1 | DUF968 domain-containing protein | - |
| EKH78_RS07825 (1612213) | 1612213..1612491 | - | 279 | WP_012304870.1 | hypothetical protein | - |
| EKH78_RS07830 (1612558) | 1612558..1612809 | - | 252 | WP_000980994.1 | protein Rem | - |
| EKH78_RS07835 (1613026) | 1613026..1613181 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| EKH78_RS07840 (1613253) | 1613253..1613540 | - | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| EKH78_RS07845 (1613540) | 1613540..1613779 | - | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| EKH78_RS07850 (1613804) | 1613804..1614109 | + | 306 | WP_001326990.1 | protein YdfV | - |
| EKH78_RS07855 (1614312) | 1614312..1614644 | + | 333 | WP_001301033.1 | FlxA-like family protein | - |
| EKH78_RS07860 (1615081) | 1615081..1615230 | - | 150 | WP_011443592.1 | protein YdfW | - |
| EKH78_RS07865 (1615265) | 1615265..1615543 | - | 279 | Protein_1559 | protein YdfX | - |
| EKH78_RS07870 (1615527) | 1615527..1615757 | - | 231 | WP_000920568.1 | dicB transcriptional regulator DicC | - |
| EKH78_RS07875 (1615841) | 1615841..1616248 | + | 408 | WP_000448564.1 | DNA-binding transcriptional dual regulator DicA | - |
| EKH78_RS07880 (1616415) | 1616415..1616570 | + | 156 | WP_000379575.1 | DUF1391 family protein | - |
| EKH78_RS24910 (1616572) | 1616572..1616700 | + | 129 | WP_000344964.1 | protein YdfB | - |
| EKH78_RS07885 (1616730) | 1616730..1616948 | + | 219 | WP_001171942.1 | protein YdfC | - |
| EKH78_RS07890 (1617516) | 1617516..1617704 | + | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| EKH78_RS07895 (1617701) | 1617701..1617892 | + | 192 | WP_001083297.1 | lysis protein YdfD | - |
| EKH78_RS07900 (1617985) | 1617985..1618752 | + | 768 | Protein_1567 | exonuclease | - |
| EKH78_RS07905 (1618749) | 1618749..1619444 | + | 696 | Protein_1568 | IS3 family transposase IS2 | Transposase |
| EKH78_RS07910 (1619458) | 1619458..1620615 | + | 1158 | Protein_1569 | Tyrosine recombinase XerD ; Integrase | Integrase |
| EKH78_RS07920 (1620803) | 1620803..1621822 | - | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| EKH78_RS07925 (1621834) | 1621834..1623048 | - | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| EKH78_RS07930 (1623254) | 1623254..1623580 | - | 327 | WP_000598292.1 | YnfA family protein | - |
| EKH78_RS07935 (1623715) | 1623715..1624056 | + | 342 | WP_000705211.1 | DUF1283 family protein | - |
| EKH78_RS07940 (1624091) | 1624091..1624651 | + | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| EKH78_RS07945 (1624654) | 1624654..1625364 | - | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|