MGE detailed information
MGE type: Prophage MGE length: 88922 bp
Accession: NZ_CP034486 Location: 1217168..1306089 Organism: Staphylococcus aureus strain PMB 64-1 Replicon: chromosome
Accession: NZ_CP034486 Location: 1217168..1306089 Organism: Staphylococcus aureus strain PMB 64-1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EJN87_RS06050 () | 1213450..1214952 | - | 1503 | WP_001261671.1 | FAD/NAD(P)-binding domain-containing protein | - |
| EJN87_RS06055 () | 1215475..1215789 | + | 315 | WP_000221179.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| EJN87_RS06060 () | 1215789..1217081 | + | 1293 | WP_000989116.1 | arsenite efflux transporter membrane subunit ArsB | - |
| EJN87_RS06065 () | 1217168..1218022 | - | 855 | WP_001032833.1 | N-acetylglucosaminidase | - |
| EJN87_RS06070 () | 1218298..1218522 | - | 225 | WP_000384171.1 | hypothetical protein | - |
| EJN87_RS06075 () | 1218721..1219191 | + | 471 | WP_000671052.1 | RNA polymerase sigma factor SigS | - |
| EJN87_RS06080 () | 1219304..1219747 | + | 444 | WP_001153742.1 | competence protein ComK | - |
| EJN87_RS06085 () | 1219734..1220177 | - | 444 | WP_001030469.1 | hypothetical protein | - |
| EJN87_RS06090 () | 1220473..1221108 | + | 636 | WP_001168907.1 | CPBP family intramembrane metalloprotease SdpA | - |
| EJN87_RS06095 () | 1221547..1222260 | - | 714 | WP_001096494.1 | transaldolase | - |
| EJN87_RS06100 () | 1222520..1222822 | + | 303 | WP_000091445.1 | hypothetical protein | - |
| EJN87_RS06105 () | 1223078..1223443 | + | 366 | WP_001200542.1 | fluoride efflux transporter CrcB | - |
| EJN87_RS06110 () | 1223440..1223793 | + | 354 | WP_000623476.1 | CrcB family protein | - |
| EJN87_RS06120 () | 1224176..1225009 | - | 834 | WP_000453314.1 | aldo/keto reductase | - |
| EJN87_RS06125 () | 1225221..1226129 | - | 909 | WP_000366158.1 | NERD domain-containing protein | - |
| EJN87_RS06130 () | 1226254..1227447 | - | 1194 | WP_000933822.1 | methionine adenosyltransferase | - |
| EJN87_RS06135 () | 1227819..1229411 | + | 1593 | WP_000109910.1 | phosphoenolpyruvate carboxykinase (ATP) | - |
| EJN87_RS06140 () | 1229789..1230535 | - | 747 | WP_016169057.1 | S9 family peptidase | - |
| EJN87_RS06145 () | 1230540..1231013 | - | 474 | WP_126133666.1 | nucleoside triphosphatase YtkD | - |
| EJN87_RS06150 () | 1231079..1231336 | + | 258 | WP_000718107.1 | membrane protein insertion efficiency factor YidD | - |
| EJN87_RS06155 () | 1231333..1232334 | - | 1002 | WP_063456333.1 | o-succinylbenzoate synthase | - |
| EJN87_RS06160 () | 1232339..1233817 | - | 1479 | WP_000348356.1 | o-succinylbenzoate--CoA ligase | - |
| EJN87_RS06165 () | 1233976..1234431 | - | 456 | WP_072419835.1 | DUF4909 domain-containing protein | - |
| EJN87_RS06170 () | 1234734..1235384 | + | 651 | WP_001793444.1 | excalibur calcium-binding domain-containing protein | - |
| EJN87_RS06175 () | 1235465..1236460 | + | 996 | WP_000070649.1 | DUF4352 domain-containing protein | - |
| EJN87_RS06180 () | 1236534..1237160 | + | 627 | WP_000669017.1 | hypothetical protein | - |
| EJN87_RS06185 () | 1237201..1237542 | + | 342 | WP_000627541.1 | DUF3969 family protein | - |
| EJN87_RS06190 () | 1237643..1238215 | + | 573 | WP_000414202.1 | hypothetical protein | - |
| EJN87_RS06195 () | 1238413..1238970 | - | 558 | Protein_1177 | ImmA/IrrE family metallo-endopeptidase | - |
| EJN87_RS06205 () | 1239344..1239520 | - | 177 | WP_000375477.1 | hypothetical protein | - |
| EJN87_RS06210 () | 1239531..1239914 | - | 384 | WP_000070811.1 | hypothetical protein | - |
| EJN87_RS06220 () | 1240518..1240661 | - | 144 | WP_001549059.1 | IS3 family transposase IS655 | Transposase |
| EJN87_RS06230 () | 1240864..1240959 | + | 96 | WP_001801861.1 | type I toxin-antitoxin system Fst family toxin PepA1 | Toxin Detail |
| EJN87_RS06235 () | 1241082..1241183 | + | 102 | WP_001791893.1 | hypothetical protein | - |
| EJN87_RS06240 () | 1241161..1241337 | - | 177 | Protein_1183 | transposase | - |
| EJN87_RS06245 () | 1241531..1241908 | - | 378 | WP_001037045.1 | DUF1433 domain-containing protein | - |
| EJN87_RS06250 () | 1242429..1246050 | - | 3622 | Protein_1185 | ATP-binding protein | - |
| EJN87_RS06255 () | 1246103..1247275 | - | 1173 | WP_000195429.1 | IS256 family transposase IS256 | Transposase |
| EJN87_RS06260 () | 1247374..1247889 | - | 516 | Protein_1187 | SMEK domain-containing protein | - |
| EJN87_RS06265 () | 1248739..1249938 | - | 1200 | WP_126133668.1 | restriction endonuclease subunit S | - |
| EJN87_RS06270 () | 1249931..1251487 | - | 1557 | WP_206435241.1 | type I restriction-modification system subunit M | - |
| EJN87_RS06275 () | 1251651..1251785 | - | 135 | WP_001791797.1 | hypothetical protein | - |
| EJN87_RS06280 () | 1251850..1252569 | - | 720 | WP_001038688.1 | hypothetical protein | VF |
| EJN87_RS06285 () | 1252720..1253436 | - | 717 | WP_001038759.1 | hypothetical protein | VF |
| EJN87_RS06290 () | 1253538..1253645 | + | 108 | WP_011447030.1 | hypothetical protein | - |
| EJN87_RS06295 () | 1253594..1254312 | - | 719 | Protein_1194 | hypothetical protein | VF |
| EJN87_RS06300 () | 1254433..1255152 | - | 720 | WP_001038865.1 | hypothetical protein | VF |
| EJN87_RS06305 () | 1255210..1255932 | - | 723 | WP_001039444.1 | hypothetical protein | VF |
| EJN87_RS06310 () | 1256057..1256764 | - | 708 | WP_001039435.1 | hypothetical protein | VF |
| EJN87_RS06320 () | 1257728..1258294 | + | 567 | WP_001092763.1 | DUF4888 domain-containing protein | - |
| EJN87_RS06325 () | 1258768..1259466 | - | 699 | WP_000586140.1 | hypothetical protein | - |
| EJN87_RS06330 () | 1259463..1260224 | - | 762 | WP_126133670.1 | lantibiotic immunity ABC transporter MutE/EpiE family permease subunit | - |
| EJN87_RS06335 () | 1260221..1260913 | - | 693 | WP_001096791.1 | hypothetical protein | VF |
| EJN87_RS06340 () | 1260936..1262309 | - | 1374 | WP_000691541.1 | S8 family serine peptidase | - |
| EJN87_RS06345 () | 1262319..1262837 | - | 519 | WP_000504439.1 | flavoprotein | - |
| EJN87_RS06350 () | 1262853..1264097 | - | 1245 | WP_000566596.1 | lanthionine synthetase C family protein | - |
| EJN87_RS06355 () | 1264090..1267083 | - | 2994 | WP_001092605.1 | lantibiotic dehydratase | - |
| EJN87_RS06360 () | 1267148..1267291 | - | 144 | WP_000416756.1 | gallidermin/nisin family lantibiotic | - |
| EJN87_RS06365 () | 1267691..1268863 | - | 1173 | WP_000195429.1 | IS256 family transposase IS256 | Transposase |
| EJN87_RS06375 () | 1269360..1269503 | - | 144 | WP_000416759.1 | gallidermin/nisin family lantibiotic | - |
| EJN87_RS06380 () | 1269745..1270728 | - | 984 | WP_000782464.1 | hypothetical protein | VF |
| EJN87_RS06385 () | 1270730..1271665 | - | 936 | WP_063456334.1 | hypothetical protein | VF |
| EJN87_RS06390 () | 1272562..1273017 | + | 456 | WP_001086056.1 | hypothetical protein | - |
| EJN87_RS06395 () | 1273030..1273287 | + | 258 | Protein_1212 | DUF1828 domain-containing protein | - |
| EJN87_RS06405 () | 1273385..1274557 | + | 1173 | WP_000195429.1 | IS256 family transposase IS256 | Transposase |
| EJN87_RS06410 () | 1274608..1275150 | + | 543 | Protein_1214 | DUF1829 domain-containing protein | - |
| EJN87_RS06465 () | 1277607..1278161 | - | 555 | WP_063456335.1 | alpha/beta hydrolase | - |
| EJN87_RS06475 () | 1278483..1279883 | - | 1401 | WP_000167542.1 | protoporphyrinogen oxidase | - |
| EJN87_RS06480 () | 1279907..1280830 | - | 924 | WP_000162881.1 | ferrochelatase | - |
| EJN87_RS06485 () | 1280888..1281925 | - | 1038 | WP_000233526.1 | uroporphyrinogen decarboxylase | - |
| EJN87_RS06490 () | 1281915..1282025 | - | 111 | WP_001790154.1 | hypothetical protein | - |
| EJN87_RS06495 () | 1282188..1282691 | + | 504 | WP_000737978.1 | signal transduction protein TRAP | - |
| EJN87_RS06500 () | 1282815..1284038 | - | 1224 | WP_000551840.1 | ABC transporter permease | - |
| EJN87_RS06505 () | 1284031..1284771 | - | 741 | WP_000216873.1 | hypothetical protein | VF |
| EJN87_RS06510 () | 1284905..1285327 | + | 423 | WP_000004981.1 | HIT family protein | - |
| EJN87_RS06515 () | 1285469..1285834 | + | 366 | WP_000648118.1 | YtxH domain-containing protein | - |
| EJN87_RS06525 () | 1286567..1287124 | + | 558 | WP_000477957.1 | DUF3267 domain-containing protein | - |
| EJN87_RS06530 () | 1287328..1288290 | + | 963 | WP_126133671.1 | hypothetical protein | VF |
| EJN87_RS06535 () | 1288411..1289352 | - | 942 | WP_001244179.1 | 3'-5' exoribonuclease YhaM | - |
| EJN87_RS06540 () | 1289349..1292285 | - | 2937 | WP_000584628.1 | AAA family ATPase | - |
| EJN87_RS06545 () | 1292275..1293471 | - | 1197 | WP_000238230.1 | exonuclease SbcCD subunit D | - |
| EJN87_RS06550 () | 1293762..1293860 | - | 99 | WP_001802255.1 | hypothetical protein | - |
| EJN87_RS06560 () | 1294353..1294697 | - | 345 | WP_000290301.1 | YlbF/YmcA family competence regulator | - |
| EJN87_RS06565 () | 1294766..1295890 | - | 1125 | WP_000992521.1 | DUF445 domain-containing protein | - |
| EJN87_RS06570 () | 1296069..1296533 | - | 465 | WP_000375864.1 | helix-turn-helix transcriptional regulator | - |
| EJN87_RS06575 () | 1296889..1297512 | - | 624 | WP_001045133.1 | hypothetical protein | VF |
| EJN87_RS06580 () | 1297534..1298646 | - | 1113 | WP_000437968.1 | GAF domain-containing sensor histidine kinase | - |
| EJN87_RS06585 () | 1298809..1299630 | + | 822 | WP_000669376.1 | RluA family pseudouridine synthase | - |
| EJN87_RS06590 () | 1300091..1301476 | - | 1386 | WP_000116229.1 | class II fumarate hydratase | - |
| EJN87_RS06595 () | 1301672..1302067 | - | 396 | WP_000901023.1 | hypothetical protein | - |
| EJN87_RS06605 () | 1302673..1302825 | - | 153 | WP_000031108.1 | hypothetical protein | Toxin Detail |
| EJN87_RS06610 () | 1302850..1303449 | - | 600 | WP_001251224.1 | glucosamine-6-phosphate isomerase | Antitoxin Detail |
| EJN87_RS06615 () | 1303608..1304078 | - | 471 | WP_000181394.1 | tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL | - |
| EJN87_RS06620 () | 1304083..1305210 | - | 1128 | WP_000379987.1 | tRNA epoxyqueuosine(34) reductase QueG | - |
| EJN87_RS06625 () | 1305361..1306083 | - | 723 | WP_000590809.1 | hypothetical protein | VF |
| EJN87_RS06630 () | 1306076..1307533 | - | 1458 | WP_000649907.1 | ABC transporter permease subunit | - |
| EJN87_RS06635 () | 1307791..1308852 | - | 1062 | WP_000063582.1 | PTS transporter subunit IIC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|