MGE detailed information
MGE type: Genomic_island MGE length: 66569 bp
Accession: NZ_CP034482 Location: 4182832..4249400 Organism: Rahnella aquatilis strain KM12 Replicon: chromosome
Accession: NZ_CP034482 Location: 4182832..4249400 Organism: Rahnella aquatilis strain KM12 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EJP81_RS19235 () | 4178739..4179236 | + | 498 | WP_013577133.1 | OmpA family protein | - |
| EJP81_RS19240 () | 4179238..4180110 | - | 873 | WP_013577134.1 | LysR family transcriptional regulator | - |
| EJP81_RS19245 () | 4180215..4180997 | + | 783 | WP_013577135.1 | acetolactate decarboxylase | - |
| EJP81_RS19250 () | 4181025..4182701 | + | 1677 | WP_013577136.1 | acetolactate synthase AlsS | - |
| EJP81_RS19255 () | 4182832..4184403 | + | 1572 | WP_013577137.1 | DUF3578 domain-containing protein | - |
| EJP81_RS19260 () | 4184403..4185677 | + | 1275 | WP_126125188.1 | McrC family protein | - |
| EJP81_RS19265 () | 4186012..4186233 | + | 222 | WP_013577139.1 | hypothetical protein | - |
| EJP81_RS19270 () | 4186300..4187436 | - | 1137 | WP_013577140.1 | porin | - |
| EJP81_RS19275 () | 4188065..4188400 | + | 336 | WP_013577141.1 | hypothetical protein | - |
| EJP81_RS19280 () | 4188378..4189298 | - | 921 | WP_013577142.1 | alpha/beta hydrolase | - |
| EJP81_RS19285 () | 4189434..4190756 | - | 1323 | WP_126124962.1 | IS4 family transposase IS1271 | Transposase |
| EJP81_RS25025 () | 4192846..4193877 | + | 1032 | WP_205963699.1 | AAA family ATPase | - |
| EJP81_RS19295 () | 4193874..4195160 | + | 1287 | WP_126125190.1 | McrC family protein | - |
| EJP81_RS19300 () | 4195143..4196006 | - | 864 | Protein_3768 | DUF4942 domain-containing protein | - |
| EJP81_RS19305 () | 4196145..4197371 | - | 1227 | WP_126125191.1 | O-antigen ligase family protein | - |
| EJP81_RS19310 () | 4197368..4198543 | - | 1176 | WP_126125192.1 | putative lipopolysaccharide heptosyltransferase III | - |
| EJP81_RS19315 () | 4199080..4199463 | - | 384 | WP_126125193.1 | TA system toxin CbtA family protein | Toxin Detail |
| EJP81_RS19320 () | 4199539..4199907 | - | 369 | WP_126125194.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| EJP81_RS19325 () | 4199963..4200169 | - | 207 | WP_126125195.1 | hypothetical protein | - |
| EJP81_RS19330 () | 4200179..4200628 | - | 450 | WP_126125196.1 | DNA repair protein RadC | - |
| EJP81_RS19335 () | 4200721..4201542 | - | 822 | WP_126125197.1 | DUF945 domain-containing protein | - |
| EJP81_RS19340 () | 4201659..4202777 | - | 1119 | WP_126125198.1 | hypothetical protein | - |
| EJP81_RS19345 () | 4203215..4204099 | - | 885 | WP_126125199.1 | 50S ribosome-binding GTPase | - |
| EJP81_RS19350 () | 4204358..4205209 | - | 852 | WP_126125200.1 | hypothetical protein | - |
| EJP81_RS19355 () | 4205968..4206579 | + | 612 | WP_126125201.1 | inovirus Gp2 family protein | - |
| EJP81_RS19360 () | 4206706..4206924 | + | 219 | WP_126125202.1 | AlpA family transcriptional regulator | - |
| EJP81_RS19365 () | 4206938..4207345 | - | 408 | WP_168444243.1 | helix-turn-helix domain-containing protein | - |
| EJP81_RS19370 () | 4207543..4207656 | + | 114 | Protein_3782 | IS3 family transposase ISYen3 | Transposase |
| EJP81_RS19375 () | 4207876..4208055 | - | 180 | Protein_3783 | IS110 family transposase ISKpn2 | Transposase |
| EJP81_RS19380 () | 4208105..4208257 | - | 153 | WP_168444244.1 | hypothetical protein | - |
| EJP81_RS19385 () | 4208831..4210021 | + | 1191 | WP_126125204.1 | group II intron reverse transcriptase/maturase | - |
| EJP81_RS19390 () | 4209961..4210323 | + | 363 | WP_126125205.1 | hypothetical protein | - |
| EJP81_RS19395 () | 4210766..4211104 | + | 339 | WP_126125206.1 | hypothetical protein | VF |
| EJP81_RS19400 () | 4211265..4212176 | + | 912 | WP_126125207.1 | hypothetical protein | - |
| EJP81_RS19405 () | 4212477..4215143 | + | 2667 | WP_126125208.1 | hypothetical protein | - |
| EJP81_RS19410 () | 4215448..4216239 | + | 792 | WP_126125209.1 | hypothetical protein | - |
| EJP81_RS19415 () | 4216588..4216995 | + | 408 | WP_126125210.1 | IS66 family transposase ISCfr14 | Transposase |
| EJP81_RS19420 () | 4216992..4217210 | + | 219 | WP_126125211.1 | IS66 family transposase ISEc8 | Transposase |
| EJP81_RS19425 () | 4217826..4218146 | + | 321 | WP_126125212.1 | hypothetical protein | - |
| EJP81_RS19430 () | 4218491..4218762 | + | 272 | Protein_3794 | hypothetical protein | VF |
| EJP81_RS19435 () | 4218887..4219138 | + | 252 | Protein_3795 | DUF1294 domain-containing protein | - |
| EJP81_RS19440 () | 4219353..4223054 | + | 3702 | WP_205963702.1 | SIR2 family protein | - |
| EJP81_RS19445 () | 4223177..4226002 | + | 2826 | WP_126125214.1 | hypothetical protein | - |
| EJP81_RS19450 () | 4225999..4228629 | + | 2631 | WP_126125215.1 | adenosine deaminase | - |
| EJP81_RS19455 () | 4229107..4230543 | + | 1437 | WP_168444245.1 | UvrD-helicase domain-containing protein | - |
| EJP81_RS19460 () | 4230540..4231190 | + | 651 | WP_126125217.1 | DUF4433 domain-containing protein | - |
| EJP81_RS19465 () | 4231180..4232520 | + | 1341 | Protein_3801 | ADP-ribosylglycohydrolase family protein | - |
| EJP81_RS19470 () | 4233078..4234334 | - | 1257 | WP_126125218.1 | Prophage integrase IntS ; Integrase | Integrase |
| EJP81_RS19480 () | 4234824..4235963 | + | 1140 | WP_013577143.1 | D-alanyl-D-alanine- carboxypeptidase/endopeptidase AmpH | - |
| EJP81_RS19485 () | 4236057..4237127 | - | 1071 | WP_013577144.1 | LPS export ABC transporter permease LptG | - |
| EJP81_RS19490 () | 4237127..4238221 | - | 1095 | WP_013577145.1 | LPS export ABC transporter permease LptF | - |
| EJP81_RS19495 () | 4238500..4240011 | + | 1512 | WP_013577146.1 | leucyl aminopeptidase | - |
| EJP81_RS19500 () | 4240127..4240612 | + | 486 | WP_013577147.1 | DNA polymerase III subunit chi | - |
| EJP81_RS19505 () | 4240605..4243460 | + | 2856 | WP_126125219.1 | valine--tRNA ligase | - |
| EJP81_RS19510 () | 4243550..4244581 | - | 1032 | WP_205569701.1 | LysR family transcriptional regulator | - |
| EJP81_RS19515 () | 4245076..4246032 | - | 957 | WP_168444246.1 | fimbrial protein | - |
| EJP81_RS19520 () | 4246047..4248662 | - | 2616 | WP_013577151.1 | Outer membrane usher protein FimD | VF |
| EJP81_RS19525 () | 4248710..4249400 | - | 691 | Protein_3812 | putative fimbrial chaperone LpfB | VF |
| EJP81_RS19530 () | 4249463..4249972 | - | 510 | WP_013577153.1 | type 1 fimbrial protein | - |
| EJP81_RS19535 () | 4250027..4250542 | - | 516 | WP_015690498.1 | type 1 fimbrial protein | - |
| EJP81_RS19540 () | 4251297..4252322 | - | 1026 | WP_112151032.1 | M48 family metallopeptidase | - |
| EJP81_RS19545 () | 4252326..4253516 | - | 1191 | WP_126125221.1 | DUF898 domain-containing protein | - |
| EJP81_RS19550 () | 4253777..4254280 | + | 504 | WP_112151033.1 | GNAT family N-acetyltransferase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|