MGE detailed information
MGE type: Mobilizable plasmid MGE length: 211326 bp
Accession: NZ_CP034471 Location: 1..211326 Organism: Pantoea agglomerans strain CFSAN047153 Replicon: plasmid pCFSAN047153_2
Accession: NZ_CP034471 Location: 1..211326 Organism: Pantoea agglomerans strain CFSAN047153 Replicon: plasmid pCFSAN047153_2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D1628_RS22095 () | 159..1163 | - | 1005 | WP_129063450.1 | LacI family DNA-binding transcriptional regulator | - |
| D1628_RS22100 () | 1193..2602 | - | 1410 | WP_052271891.1 | sucrose-6-phosphate hydrolase | - |
| D1628_RS22105 () | 2602..3972 | - | 1371 | WP_010256928.1 | sucrose-specific PTS transporter subunit IIBC | - |
| D1628_RS22110 () | 4040..5575 | - | 1536 | WP_129063449.1 | carbohydrate porin | - |
| D1628_RS22115 () | 5733..6659 | - | 927 | WP_033770161.1 | aminoimidazole riboside kinase | - |
| D1628_RS22120 () | 6879..7850 | - | 972 | WP_010671957.1 | ParB/RepB/Spo0J family partition protein | - |
| D1628_RS22125 () | 7847..9049 | - | 1203 | WP_010256940.1 | Plasmid partition protein A | VF |
| D1628_RS22130 () | 11102..12175 | + | 1074 | WP_010256943.1 | RepB family plasmid replication initiator protein | - |
| D1628_RS22135 () | 13539..14726 | - | 1188 | WP_129063448.1 | diguanylate phosphodiesterase | - |
| D1628_RS22140 () | 14978..15187 | - | 210 | WP_033759908.1 | DUF1471 domain-containing protein | - |
| D1628_RS22145 () | 15387..17171 | - | 1785 | WP_129063447.1 | GGDEF and EAL domain-containing protein | - |
| D1628_RS22150 () | 17692..17916 | - | 225 | WP_010256955.1 | DUF3606 domain-containing protein | - |
| D1628_RS22155 () | 18285..18524 | + | 240 | WP_022624236.1 | hypothetical protein | - |
| D1628_RS22160 () | 18700..19188 | + | 489 | WP_010256958.1 | Hsp20 family protein | - |
| D1628_RS22165 () | 19262..20026 | - | 765 | WP_010256962.1 | MerR family transcriptional regulator | - |
| D1628_RS22170 () | 20222..20431 | - | 210 | WP_129063446.1 | CsbD family protein | - |
| D1628_RS22175 () | 20603..21820 | - | 1218 | WP_010256973.1 | diguanylate phosphodiesterase | - |
| D1628_RS22185 () | 23089..23418 | - | 330 | WP_129063445.1 | hypothetical protein | - |
| D1628_RS22190 () | 24060..25718 | + | 1659 | WP_033774058.1 | Methyl-accepting chemotaxis protein I | VF |
| D1628_RS22195 () | 26321..28246 | + | 1926 | WP_050680262.1 | Methyl-accepting chemotaxis protein I | VF |
| D1628_RS22200 () | 28302..29102 | - | 801 | WP_010256989.1 | MBL fold metallo-hydrolase | - |
| D1628_RS22205 () | 29180..30295 | - | 1116 | WP_129063444.1 | metallophosphoesterase | - |
| D1628_RS22210 () | 30533..32860 | - | 2328 | WP_033770142.1 | FdhF/YdeP family oxidoreductase | - |
| D1628_RS22215 () | 33215..33658 | + | 444 | WP_129063460.1 | hypothetical protein | - |
| D1628_RS22220 () | 33832..34179 | - | 348 | WP_003850685.1 | HNH nuclease YajD | - |
| D1628_RS24560 () | 34514..34681 | - | 168 | WP_009093121.1 | hypothetical protein | - |
| D1628_RS22225 () | 34972..38076 | + | 3105 | WP_129063443.1 | Multidrug resistance protein MexB | VF |
| D1628_RS22230 () | 38136..39161 | - | 1026 | WP_010257012.1 | alpha/beta hydrolase | - |
| D1628_RS22235 () | 39230..40423 | - | 1194 | WP_164973036.1 | MFS transporter | - |
| D1628_RS22240 () | 40557..41453 | + | 897 | WP_129063441.1 | HTH-type transcriptional regulator PgrR | VF |
| D1628_RS22245 () | 41517..41693 | - | 177 | WP_010257023.1 | stress-induced protein | - |
| D1628_RS22250 () | 41893..42189 | + | 297 | WP_039387382.1 | hypothetical protein | - |
| D1628_RS22255 () | 42234..42521 | - | 288 | WP_033759930.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| D1628_RS22260 () | 42521..42760 | - | 240 | WP_010257033.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| D1628_RS22265 () | 43120..45093 | + | 1974 | WP_129063440.1 | Aerotaxis receptor | VF |
| D1628_RS22270 () | 45198..46214 | + | 1017 | WP_010257039.1 | NAD(P)-dependent alcohol dehydrogenase | - |
| D1628_RS22275 () | 46264..46932 | - | 669 | WP_033774070.1 | hypothetical protein | - |
| D1628_RS22280 () | 47283..48062 | + | 780 | WP_129063439.1 | MBL fold metallo-hydrolase | - |
| D1628_RS22285 () | 48138..49130 | + | 993 | WP_129063438.1 | HTH-type transcriptional regulator CdhR | VF |
| D1628_RS22290 () | 49222..49623 | - | 402 | WP_010671934.1 | H-NS histone family protein | - |
| D1628_RS22295 () | 49899..51461 | + | 1563 | WP_033774073.1 | Phytochrome-like protein cph2 | VF |
| D1628_RS22300 () | 51530..51976 | + | 447 | WP_033774074.1 | VOC family protein | - |
| D1628_RS22305 () | 52206..52607 | - | 402 | WP_010257055.1 | H-NS histone family protein | - |
| D1628_RS22310 () | 53480..53665 | + | 186 | WP_010671932.1 | DUF2256 domain-containing protein | - |
| D1628_RS22315 () | 53717..54019 | - | 303 | WP_029519489.1 | hypothetical protein | - |
| D1628_RS22320 () | 54125..54667 | - | 543 | WP_033770122.1 | porin | - |
| D1628_RS22325 () | 54731..54967 | - | 237 | WP_033774076.1 | YgdI/YgdR family lipoprotein | - |
| D1628_RS22330 () | 55939..56319 | + | 381 | WP_010671929.1 | YgiW/YdeI family stress tolerance OB fold protein | - |
| D1628_RS22335 () | 56800..57024 | + | 225 | WP_033774079.1 | FeoA domain-containing protein | - |
| D1628_RS22340 () | 57024..59351 | + | 2328 | WP_129063437.1 | Fe(2+) transporter FeoB | VF |
| D1628_RS22345 () | 59789..60826 | - | 1038 | WP_129063436.1 | tyrosine-type recombinase/integrase | - |
| D1628_RS22350 () | 61761..62231 | + | 471 | WP_033770116.1 | SgcJ/EcaC family oxidoreductase | - |
| D1628_RS22355 () | 62526..63743 | - | 1218 | WP_129063435.1 | monooxygenase | - |
| D1628_RS22360 () | 63736..65196 | - | 1461 | WP_033781082.1 | MFS transporter | - |
| D1628_RS22365 () | 65557..66966 | - | 1410 | WP_129063434.1 | LLM class flavin-dependent oxidoreductase | - |
| D1628_RS22370 () | 67035..68447 | - | 1413 | WP_129063433.1 | FAD/NAD(P)-binding protein | - |
| D1628_RS22375 () | 68467..69639 | - | 1173 | WP_129063432.1 | FMNH2-dependent alkanesulfonate monooxygenase | - |
| D1628_RS22380 () | 69914..71803 | + | 1890 | WP_033774090.1 | Transcriptional regulatory protein ZraR | VF |
| D1628_RS22385 () | 71899..72849 | + | 951 | WP_010671919.1 | sulfonate ABC transporter substrate-binding protein | - |
| D1628_RS22390 () | 73219..74352 | + | 1134 | WP_033774091.1 | glutathione-independent formaldehyde dehydrogenase | - |
| D1628_RS22395 () | 74653..74904 | + | 252 | WP_033774093.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| D1628_RS22400 () | 74901..75188 | + | 288 | WP_129063431.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| D1628_RS22405 () | 75551..75865 | + | 315 | WP_033759977.1 | hypothetical protein | - |
| D1628_RS22410 () | 75862..76680 | - | 819 | WP_089415112.1 | DUF4225 domain-containing protein | - |
| D1628_RS22415 () | 76939..77169 | + | 231 | Protein_65 | IS3 family transposase ISEhe4 | Transposase |
| D1628_RS22420 () | 77203..77828 | + | 626 | Protein_66 | transposase | - |
| D1628_RS22425 () | 78386..79981 | + | 1596 | WP_129063430.1 | GNAT family N-acetyltransferase | - |
| D1628_RS22430 () | 80043..81209 | + | 1167 | WP_129063429.1 | MFS transporter | - |
| D1628_RS22435 () | 81318..82055 | - | 738 | WP_033774098.1 | metallophosphoesterase | - |
| D1628_RS22445 () | 82771..83373 | + | 603 | WP_033774099.1 | DUF2913 family protein | - |
| D1628_RS22450 () | 83432..84350 | - | 919 | Protein_71 | Rpn family recombination-promoting nuclease/putative transposase | - |
| D1628_RS24565 () | 84645..84821 | - | 177 | WP_158132465.1 | hypothetical protein | - |
| D1628_RS22455 () | 85160..85444 | - | 285 | Protein_73 | general secretion pathway protein GspD | - |
| D1628_RS24570 () | 85380..85685 | + | 306 | WP_164973034.1 | hypothetical protein | - |
| D1628_RS22460 () | 85789..86046 | + | 258 | WP_033774102.1 | hypothetical protein | - |
| D1628_RS22465 () | 86118..86594 | + | 477 | WP_033774104.1 | hypothetical protein | - |
| D1628_RS22470 () | 86615..86914 | + | 300 | Protein_77 | hypothetical protein | - |
| D1628_RS22475 () | 87188..88220 | - | 1033 | Protein_78 | tyrosine-type recombinase/integrase | - |
| D1628_RS22480 () | 88824..89879 | - | 1056 | WP_033774106.1 | hypothetical protein | - |
| D1628_RS22485 () | 91142..91633 | - | 492 | WP_033774108.1 | DUF2165 family protein | - |
| D1628_RS22490 () | 91633..92703 | - | 1071 | WP_050499143.1 | hypothetical protein | - |
| D1628_RS22495 () | 92704..92931 | - | 228 | WP_033774111.1 | hypothetical protein | VF |
| D1628_RS22500 () | 92921..94402 | - | 1482 | WP_080717704.1 | AMP-binding protein | - |
| D1628_RS22505 () | 94473..95627 | - | 1155 | WP_050499144.1 | hypothetical protein | - |
| D1628_RS22510 () | 95620..96411 | - | 792 | WP_033774114.1 | SDR family oxidoreductase | - |
| D1628_RS22515 () | 96411..97847 | - | 1437 | WP_050499145.1 | MFS transporter | - |
| D1628_RS22520 () | 97871..98554 | - | 684 | WP_033774116.1 | methyltransferase domain-containing protein | - |
| D1628_RS22525 () | 98599..100020 | - | 1422 | WP_033774118.1 | aldehyde dehydrogenase family protein | - |
| D1628_RS22530 () | 100020..101120 | - | 1101 | WP_050499146.1 | AMP-binding protein | - |
| D1628_RS22535 () | 101101..101727 | - | 627 | WP_072008789.1 | Phenazine biosynthesis protein PhzG | VF |
| D1628_RS22540 () | 101765..102628 | - | 864 | WP_033774119.1 | Trans-2,3-dihydro-3-hydroxyanthranilate isomerase | VF |
| D1628_RS22545 () | 102628..104457 | - | 1830 | WP_050499147.1 | Anthranilate synthase component 1 | VF |
| D1628_RS22550 () | 104525..105154 | - | 630 | WP_033774121.1 | Phenazine biosynthesis protein PhzD | VF |
| D1628_RS22555 () | 105289..105765 | - | 477 | WP_033774122.1 | Phenazine biosynthesis protein PhzB 2 | VF |
| D1628_RS22560 () | 106184..106573 | + | 390 | WP_033774124.1 | VOC family protein | - |
| D1628_RS22565 () | 107187..108041 | + | 855 | Protein_96 | tyrosine-type recombinase/integrase | - |
| D1628_RS22570 () | 108331..108621 | - | 291 | WP_022624282.1 | helix-turn-helix domain-containing protein | - |
| D1628_RS22575 () | 108618..108950 | - | 333 | WP_031292300.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| D1628_RS22580 () | 109070..109249 | - | 180 | WP_050499148.1 | hypothetical protein | - |
| D1628_RS22585 () | 109502..109714 | + | 213 | Protein_100 | haloacid dehalogenase type II | - |
| D1628_RS22590 () | 109819..110184 | - | 366 | WP_022624285.1 | 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase subunit F | - |
| D1628_RS22595 () | 110181..110501 | - | 321 | WP_010257131.1 | EamA family transporter | - |
| D1628_RS22600 () | 110501..112168 | - | 1668 | WP_033774127.1 | lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase | - |
| D1628_RS22605 () | 112168..113070 | - | 903 | WP_033774128.1 | 4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase | - |
| D1628_RS22610 () | 113070..115049 | - | 1980 | WP_033774129.1 | Bifunctional polymyxin resistance protein ArnA | VF |
| D1628_RS22615 () | 115046..116029 | - | 984 | WP_010257142.1 | Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase | VF |
| D1628_RS22620 () | 116031..117167 | - | 1137 | WP_129063427.1 | UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase | VF |
| D1628_RS22625 () | 117866..118444 | + | 579 | WP_033774155.1 | YceI family protein | - |
| D1628_RS22630 () | 118467..119252 | - | 786 | WP_022624292.1 | membrane protein | - |
| D1628_RS22635 () | 119249..119749 | - | 501 | WP_080701328.1 | ECF RNA polymerase sigma factor EcfG | VF |
| D1628_RS22640 () | 119786..120321 | - | 536 | Protein_111 | tetratricopeptide repeat protein | - |
| D1628_RS22645 () | 120465..121478 | - | 1014 | WP_033774157.1 | Gfo/Idh/MocA family oxidoreductase | - |
| D1628_RS22650 () | 121587..122597 | + | 1011 | WP_033774131.1 | LacI family DNA-binding transcriptional regulator | - |
| D1628_RS22655 () | 123200..123643 | + | 444 | WP_033774132.1 | PACE efflux transporter | - |
| D1628_RS22660 () | 123878..124081 | + | 204 | WP_010257166.1 | hemolysin | - |
| D1628_RS22665 () | 124619..124855 | - | 237 | WP_072008792.1 | DUF333 domain-containing protein | - |
| D1628_RS22670 () | 125477..128326 | + | 2850 | WP_033774134.1 | autotransporter outer membrane beta-barrel domain-containing protein | - |
| D1628_RS22675 () | 128367..128684 | + | 318 | WP_033774135.1 | NirD/YgiW/YdeI family stress tolerance protein | - |
| D1628_RS22680 () | 128747..129991 | - | 1245 | WP_010257175.1 | HlyD family type I secretion periplasmic adaptor subunit | - |
| D1628_RS22685 () | 129988..132174 | - | 2187 | WP_050499151.1 | type I secretion system permease/ATPase | - |
| D1628_RS22690 () | 132353..133678 | - | 1326 | WP_129063426.1 | TolC family protein | - |
| D1628_RS22695 () | 133962..145562 | - | 11601 | WP_164973035.1 | hypothetical protein | - |
| D1628_RS22700 () | 145926..146645 | - | 720 | WP_033774000.1 | hypothetical protein | - |
| D1628_RS22705 () | 146786..147421 | - | 636 | WP_033774001.1 | LuxR family transcriptional regulator | - |
| D1628_RS22710 () | 147467..148057 | - | 591 | WP_033759834.1 | helix-turn-helix domain-containing protein | - |
| D1628_RS22715 () | 149083..149400 | + | 318 | WP_010256762.1 | hypothetical protein | - |
| D1628_RS22720 () | 149410..149631 | + | 222 | WP_010256766.1 | hypothetical protein | - |
| D1628_RS22725 () | 149726..150256 | + | 531 | WP_010256772.1 | Major fimbrial subunit SMF-1 | VF |
| D1628_RS22730 () | 150276..151055 | + | 780 | WP_108912517.1 | putative fimbrial chaperone YadV | VF |
| D1628_RS22735 () | 151081..153672 | + | 2592 | WP_050499139.1 | Outer membrane usher protein HtrE | VF |
| D1628_RS22740 () | 153685..154740 | + | 1056 | WP_033774002.1 | type 1 fimbrial protein | - |
| D1628_RS22745 () | 154800..155462 | + | 663 | WP_033774003.1 | Transcriptional regulatory protein RcsB | VF |
| D1628_RS22750 () | 155497..156819 | + | 1323 | WP_010256785.1 | TolC family outer membrane protein | - |
| D1628_RS22755 () | 156845..158104 | + | 1260 | WP_033774006.1 | HlyD family efflux transporter periplasmic adaptor subunit | - |
| D1628_RS22760 () | 158121..160304 | + | 2184 | WP_129063424.1 | peptidase domain-containing ABC transporter | - |
| D1628_RS22765 () | 160297..160731 | + | 435 | WP_129063423.1 | DUF1795 domain-containing protein | - |
| D1628_RS22770 () | 160844..161341 | - | 498 | WP_033774010.1 | hypothetical protein | - |
| D1628_RS22775 () | 161338..162171 | - | 834 | WP_033774011.1 | winged helix-turn-helix domain-containing protein | - |
| D1628_RS22780 () | 162372..163292 | - | 921 | WP_129063422.1 | substrate-binding domain-containing protein | - |
| D1628_RS22785 () | 163361..164140 | - | 780 | WP_010256807.1 | TIM barrel protein | - |
| D1628_RS22790 () | 164140..165153 | - | 1014 | WP_033774013.1 | Gfo/Idh/MocA family oxidoreductase | - |
| D1628_RS22795 () | 165150..166613 | - | 1464 | WP_010256816.1 | sugar porter family MFS transporter | - |
| D1628_RS22800 () | 166803..168761 | + | 1959 | WP_033774015.1 | Acetoin dehydrogenase operon transcriptional activator AcoR | VF |
| D1628_RS22805 () | 168906..169520 | + | 615 | WP_010671991.1 | HTH-type transcriptional regulator BetI | VF |
| D1628_RS22810 () | 169758..171041 | + | 1284 | WP_033759862.1 | beta-ketoacyl-ACP synthase II | - |
| D1628_RS22815 () | 171283..172161 | + | 879 | WP_010256830.1 | ROK family protein | - |
| D1628_RS22820 () | 172276..173226 | - | 951 | WP_029519683.1 | Recombination-promoting nuclease RpnD | VF |
| D1628_RS22825 () | 173688..174473 | - | 786 | WP_129063421.1 | MipA/OmpV family protein | - |
| D1628_RS22830 () | 174603..175301 | + | 699 | WP_010256840.1 | Response regulator ArlR | VF |
| D1628_RS22835 () | 175298..176467 | + | 1170 | WP_033770228.1 | HAMP domain-containing protein | - |
| D1628_RS22840 () | 176561..177694 | + | 1134 | WP_050680280.1 | efflux RND transporter periplasmic adaptor subunit | - |
| D1628_RS22845 () | 177691..180735 | + | 3045 | WP_129063420.1 | efflux RND transporter permease subunit | - |
| D1628_RS22850 () | 180786..181031 | - | 246 | WP_010256845.1 | hypothetical protein | - |
| D1628_RS22855 () | 181103..182008 | - | 906 | WP_033774024.1 | LysR family transcriptional regulator | - |
| D1628_RS22860 () | 182113..182895 | + | 783 | WP_033774026.1 | acetolactate decarboxylase | - |
| D1628_RS22865 () | 182910..184589 | + | 1680 | WP_010256852.1 | acetolactate synthase AlsS | - |
| D1628_RS22870 () | 184611..185384 | + | 774 | WP_033774028.1 | Diacetyl reductase [(S)-acetoin forming] | VF |
| D1628_RS22875 () | 185590..187041 | + | 1452 | WP_072008786.1 | Flagellin | VF |
| D1628_RS22880 () | 187383..188696 | + | 1314 | WP_010256858.1 | CitMHS family transporter | - |
| D1628_RS22885 () | 188864..189703 | + | 840 | WP_033774032.1 | MBL fold metallo-hydrolase | - |
| D1628_RS22890 () | 189755..190069 | - | 315 | WP_010671977.1 | HigA family addiction module antidote protein | - |
| D1628_RS22895 () | 190169..192706 | - | 2538 | WP_033774034.1 | UvrABC system protein A | VF |
| D1628_RS22900 () | 193371..193829 | + | 459 | WP_033774141.1 | hypothetical protein | - |
| D1628_RS22905 () | 193823..194116 | + | 294 | WP_033774036.1 | DUF1493 family protein | - |
| D1628_RS22915 () | 194216..195309 | + | 1094 | WP_129063419.1 | IS3 family transposase ISKpn34 | Transposase |
| D1628_RS22920 () | 195523..197001 | - | 1479 | WP_129063418.1 | YsnF/AvaK domain-containing protein | - |
| D1628_RS22925 () | 197288..197857 | - | 570 | WP_129063459.1 | pyridoxamine 5'-phosphate oxidase family protein | - |
| D1628_RS22930 () | 198118..198702 | + | 585 | WP_129063458.1 | GNAT family N-acetyltransferase | - |
| D1628_RS22935 () | 198758..200893 | - | 2136 | WP_129063457.1 | EAL domain-containing protein | - |
| D1628_RS22945 () | 201299..201538 | - | 240 | WP_010256895.1 | hypothetical protein | - |
| D1628_RS22955 () | 201900..203333 | - | 1434 | WP_129063456.1 | Methyl-accepting chemotaxis protein II | VF |
| D1628_RS22960 () | 203680..205461 | + | 1782 | WP_029519494.1 | GGDEF and EAL domain-containing protein | - |
| D1628_RS22965 () | 205486..207069 | - | 1584 | WP_129063455.1 | sensor domain-containing diguanylate cyclase | - |
| D1628_RS22970 () | 207468..207677 | - | 210 | WP_064703104.1 | hypothetical protein | - |
| D1628_RS22975 () | 208160..209071 | + | 912 | WP_129063454.1 | GNAT family N-acetyltransferase | - |
| D1628_RS22980 () | 209073..209318 | - | 246 | WP_129063453.1 | hypothetical protein | - |
| D1628_RS22985 () | 209701..210246 | + | 546 | WP_129063452.1 | chorismate mutase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|