MGE detailed information
MGE type: Prophage MGE length: 63857 bp
Accession: NZ_CP034425 Location: 1755020..1818876 Organism: Pseudomonas libanensis strain DMSP-1 Replicon: chromosome
Accession: NZ_CP034425 Location: 1755020..1818876 Organism: Pseudomonas libanensis strain DMSP-1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EJJ21_RS08230 () | 1750767..1751006 | + | 240 | WP_032892981.1 | sulfurtransferase TusA family protein | - |
| EJJ21_RS08240 () | 1751693..1752166 | - | 474 | WP_125969671.1 | peroxiredoxin | - |
| EJJ21_RS08245 () | 1752181..1752741 | - | 561 | WP_003189463.1 | glycine cleavage system protein R | - |
| EJJ21_RS08250 () | 1753004..1753882 | + | 879 | WP_014717368.1 | 4-hydroxy-tetrahydrodipicolinate synthase | - |
| EJJ21_RS08255 () | 1753900..1755015 | + | 1116 | WP_044272801.1 | outer membrane protein assembly factor BamC | - |
| EJJ21_RS08260 () | 1755020..1755778 | + | 759 | WP_003189469.1 | MBL fold metallo-hydrolase | - |
| EJJ21_RS08265 () | 1755806..1756519 | + | 714 | WP_069558503.1 | phosphoribosylaminoimidazolesuccinocarboxamide synthase | - |
| EJJ21_RS08275 () | 1756804..1758021 | - | 1218 | WP_103451428.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| EJJ21_RS08280 () | 1758018..1758233 | - | 216 | WP_032892978.1 | excisionase family protein | - |
| EJJ21_RS08285 () | 1758418..1758681 | - | 264 | WP_103451427.1 | hypothetical protein | - |
| EJJ21_RS08290 () | 1758671..1759015 | - | 345 | WP_103451426.1 | hypothetical protein | - |
| EJJ21_RS08295 () | 1759012..1759293 | - | 282 | WP_103451425.1 | hypothetical protein | - |
| EJJ21_RS08300 () | 1759290..1760096 | - | 807 | WP_103451424.1 | DUF2786 domain-containing protein | - |
| EJJ21_RS08305 () | 1760093..1760638 | - | 546 | WP_103451423.1 | phosphohydrolase | - |
| EJJ21_RS08310 () | 1760635..1761093 | - | 459 | WP_103451422.1 | hypothetical protein | - |
| EJJ21_RS08315 () | 1761168..1761977 | - | 810 | WP_103451421.1 | DUF2303 family protein | - |
| EJJ21_RS08320 () | 1762022..1762372 | - | 351 | WP_103451420.1 | hypothetical protein | - |
| EJJ21_RS08325 () | 1762436..1762678 | - | 243 | WP_032892969.1 | pyocin activator PrtN family protein | - |
| EJJ21_RS08330 () | 1762675..1763049 | - | 375 | WP_103451419.1 | hypothetical protein | - |
| EJJ21_RS08335 () | 1763046..1763321 | - | 276 | WP_103451418.1 | hypothetical protein | - |
| EJJ21_RS08340 () | 1763333..1763914 | - | 582 | WP_103451417.1 | deoxynucleotide monophosphate kinase | - |
| EJJ21_RS08350 () | 1764260..1765057 | - | 798 | WP_103451416.1 | helix-turn-helix transcriptional regulator | - |
| EJJ21_RS08355 () | 1765176..1765385 | + | 210 | WP_032892964.1 | hypothetical protein | - |
| EJJ21_RS08360 () | 1765527..1766015 | + | 489 | WP_103451415.1 | hypothetical protein | - |
| EJJ21_RS08365 () | 1766008..1766214 | + | 207 | WP_103451414.1 | TraR/DksA C4-type zinc finger protein | - |
| EJJ21_RS08370 () | 1766234..1766557 | - | 324 | WP_103451413.1 | hypothetical protein | - |
| EJJ21_RS08375 () | 1766583..1766813 | + | 231 | WP_103451412.1 | hypothetical protein | - |
| EJJ21_RS08380 () | 1766839..1769529 | + | 2691 | WP_103451411.1 | bifunctional DNA primase/polymerase | - |
| EJJ21_RS08385 () | 1769867..1770355 | + | 489 | WP_103451410.1 | hypothetical protein | - |
| EJJ21_RS08390 () | 1770615..1770980 | + | 366 | WP_057023995.1 | hypothetical protein | - |
| EJJ21_RS08395 () | 1770973..1771263 | + | 291 | WP_103451409.1 | phage holin family protein | - |
| EJJ21_RS08400 () | 1771288..1772019 | + | 732 | WP_125969672.1 | hypothetical protein | - |
| EJJ21_RS08405 () | 1772227..1772721 | + | 495 | WP_103451407.1 | hypothetical protein | - |
| EJJ21_RS08410 () | 1772741..1774750 | + | 2010 | WP_103451438.1 | phage terminase large subunit family protein | - |
| EJJ21_RS08415 () | 1774753..1774974 | + | 222 | WP_032892955.1 | hypothetical protein | - |
| EJJ21_RS08420 () | 1774971..1776581 | + | 1611 | WP_103451406.1 | phage portal protein | - |
| EJJ21_RS08425 () | 1776584..1777933 | + | 1350 | WP_103451405.1 | S49 family peptidase | - |
| EJJ21_RS08430 () | 1777975..1778391 | + | 417 | WP_103451404.1 | cytoplasmic protein | - |
| EJJ21_RS08435 () | 1778447..1779394 | + | 948 | WP_103451403.1 | Mu-like prophage major head subunit gpT family protein | - |
| EJJ21_RS08440 () | 1779429..1779677 | + | 249 | WP_057012590.1 | hypothetical protein | - |
| EJJ21_RS08445 () | 1779667..1779867 | + | 201 | WP_057012589.1 | hypothetical protein | - |
| EJJ21_RS08450 () | 1779860..1780147 | + | 288 | WP_057012588.1 | hypothetical protein | - |
| EJJ21_RS08455 () | 1780151..1780603 | + | 453 | WP_103451402.1 | hypothetical protein | - |
| EJJ21_RS08460 () | 1780614..1781369 | + | 756 | WP_103451401.1 | hypothetical protein | - |
| EJJ21_RS08465 () | 1781366..1781713 | + | 348 | WP_200645509.1 | hypothetical protein | - |
| EJJ21_RS08470 () | 1781779..1781970 | + | 192 | WP_125969673.1 | hypothetical protein | - |
| EJJ21_RS08475 () | 1782029..1782352 | + | 324 | WP_103451399.1 | hypothetical protein | - |
| EJJ21_RS08480 () | 1782420..1785191 | + | 2772 | WP_103451398.1 | hypothetical protein | - |
| EJJ21_RS08485 () | 1785201..1785851 | + | 651 | WP_103451397.1 | DUF2460 domain-containing protein | - |
| EJJ21_RS08490 () | 1785848..1786708 | + | 861 | WP_103451396.1 | DUF2163 domain-containing protein | - |
| EJJ21_RS08495 () | 1786705..1787166 | + | 462 | WP_103451395.1 | C40 family peptidase | - |
| EJJ21_RS08500 () | 1787147..1789687 | + | 2541 | WP_103451394.1 | phage tail protein | - |
| EJJ21_RS08505 () | 1789763..1792069 | + | 2307 | WP_125969674.1 | hypothetical protein | - |
| EJJ21_RS08510 () | 1792226..1793887 | + | 1662 | WP_103451392.1 | hypothetical protein | - |
| EJJ21_RS08515 () | 1793962..1794495 | + | 534 | WP_103451391.1 | glycoside hydrolase family 19 protein | - |
| EJJ21_RS08520 () | 1794492..1795004 | + | 513 | WP_103451390.1 | lysis system i-spanin subunit Rz | - |
| EJJ21_RS08530 () | 1795373..1795945 | + | 573 | WP_103451389.1 | hypothetical protein | - |
| EJJ21_RS08535 () | 1796100..1796384 | + | 285 | WP_103451388.1 | hypothetical protein | - |
| EJJ21_RS08540 () | 1796369..1796632 | + | 264 | WP_125969675.1 | hypothetical protein | - |
| EJJ21_RS08545 () | 1796629..1796898 | + | 270 | WP_103451387.1 | hypothetical protein | - |
| EJJ21_RS08550 () | 1797273..1797566 | - | 294 | WP_047710304.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| EJJ21_RS08555 () | 1797556..1797795 | - | 240 | WP_020301039.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| EJJ21_RS08565 () | 1798449..1798703 | + | 255 | WP_003189534.1 | DUF3077 domain-containing protein | - |
| EJJ21_RS08570 () | 1798776..1800002 | - | 1227 | WP_003189535.1 | MFS transporter | - |
| EJJ21_RS08575 () | 1800246..1800533 | - | 288 | WP_003189536.1 | helix-turn-helix domain-containing protein | - |
| EJJ21_RS08580 () | 1800586..1801530 | - | 945 | WP_003189537.1 | LysR family transcriptional regulator | - |
| EJJ21_RS08585 () | 1801688..1803004 | + | 1317 | WP_047710306.1 | MHS family MFS transporter | - |
| EJJ21_RS08590 () | 1803016..1804248 | + | 1233 | WP_044272856.1 | Succinyl-diaminopimelate desuccinylase | VF |
| EJJ21_RS08595 () | 1804322..1805359 | + | 1038 | WP_044272857.1 | histone deacetylase family protein | - |
| EJJ21_RS08600 () | 1805559..1806461 | + | 903 | WP_044272880.1 | HTH-type transcriptional regulator ArgP | VF |
| EJJ21_RS08605 () | 1806453..1807211 | - | 759 | WP_044272858.1 | substrate-binding domain-containing protein | - |
| EJJ21_RS08610 () | 1807208..1808515 | - | 1308 | WP_044272859.1 | MFS transporter | - |
| EJJ21_RS29550 () | 1808713..1808856 | + | 144 | WP_003189552.1 | hypothetical protein | - |
| EJJ21_RS08615 () | 1809048..1809971 | + | 924 | WP_014717462.1 | LysR family transcriptional regulator | - |
| EJJ21_RS08620 () | 1810029..1810391 | + | 363 | WP_069558512.1 | 5-carboxymethyl-2-hydroxymuconate Delta-isomerase | - |
| EJJ21_RS08625 () | 1810500..1811435 | - | 936 | WP_069558513.1 | LysR family transcriptional regulator | - |
| EJJ21_RS08630 () | 1811573..1812760 | - | 1188 | WP_125969676.1 | cyanate transporter | - |
| EJJ21_RS08635 () | 1812975..1814597 | - | 1623 | WP_125969677.1 | 5-guanidino-2-oxopentanoate decarboxylase | - |
| EJJ21_RS08640 () | 1814709..1815581 | + | 873 | WP_125969678.1 | LysR family transcriptional regulator | - |
| EJJ21_RS08645 () | 1816078..1816692 | - | 615 | WP_078466646.1 | NAD(P)-dependent oxidoreductase | - |
| EJJ21_RS08650 () | 1816727..1817593 | - | 867 | WP_125969679.1 | MBL fold metallo-hydrolase | - |
| EJJ21_RS08655 () | 1817700..1818605 | + | 906 | WP_044273488.1 | HTH-type transcriptional regulator ArgP | VF |
| EJJ21_RS08660 () | 1818697..1818876 | + | 180 | WP_003189580.1 | hypothetical protein | - |
| EJJ21_RS08665 () | 1818869..1819744 | - | 876 | WP_044273489.1 | helix-turn-helix domain-containing protein | - |
| EJJ21_RS08670 () | 1819925..1821118 | + | 1194 | WP_125969680.1 | 4-hydroxybenzoate 3-monooxygenase | - |
| EJJ21_RS08675 () | 1821185..1822702 | + | 1518 | WP_047710314.1 | MFS transporter | - |
| EJJ21_RS08680 () | 1822862..1823701 | - | 840 | WP_044273492.1 | cache domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|