MGE detailed information
MGE type: Mobilizable plasmid MGE length: 93642 bp
Accession: NZ_CP034397 Location: 1..93642 Organism: Escherichia coli strain CRE1 Replicon: plasmid pCRE1.2
Accession: NZ_CP034397 Location: 1..93642 Organism: Escherichia coli strain CRE1 Replicon: plasmid pCRE1.2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EJC48_RS00910 () | 971..2836 | + | 1866 | WP_000178857.1 | conjugative transfer system coupling protein TraD | - |
| EJC48_RS00915 () | 3402..4016 | + | 615 | WP_015059624.1 | DUF4400 domain-containing protein | - |
| EJC48_RS00920 () | 4026..4472 | + | 447 | WP_000122507.1 | hypothetical protein | - |
| EJC48_RS00925 () | 4482..4859 | + | 378 | WP_000869297.1 | hypothetical protein | - |
| EJC48_RS00930 () | 4859..5521 | + | 663 | WP_001231464.1 | hypothetical protein | - |
| EJC48_RS26135 () | 5702..5845 | + | 144 | WP_001275801.1 | hypothetical protein | - |
| EJC48_RS00935 () | 5845..6222 | + | 378 | WP_001326174.1 | hypothetical protein | - |
| EJC48_RS00940 () | 6367..6647 | + | 281 | Protein_8 | type IV conjugative transfer system protein TraL | - |
| EJC48_RS00945 () | 6644..7270 | + | 627 | WP_001049717.1 | hypothetical protein | - |
| EJC48_RS00950 () | 7254..8171 | + | 918 | WP_000794249.1 | type-F conjugative transfer system secretin TraK | - |
| EJC48_RS00955 () | 8171..9484 | + | 1314 | WP_024131605.1 | conjugal transfer protein TraB | - |
| EJC48_RS00960 () | 9481..10059 | + | 579 | WP_000793435.1 | type IV conjugative transfer system lipoprotein TraV | - |
| EJC48_RS00965 () | 10063..10455 | + | 393 | WP_000479535.1 | hypothetical protein | - |
| EJC48_RS00970 () | 10656..13415 | + | 2760 | Protein_14 | DUF4165 domain-containing protein | - |
| EJC48_RS00975 () | 13467..14171 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| EJC48_RS00980 () | 14237..14386 | + | 150 | Protein_16 | anaerobic C4-dicarboxylate transporter DcuC | - |
| EJC48_RS00985 () | 15193..16329 | + | 1137 | WP_039060524.1 | UDP-N-acetylglucosamine 2-epimerase | VF |
| EJC48_RS00990 () | 16332..17600 | + | 1269 | WP_039060525.1 | UDP-N-acetyl-D-mannosamine dehydrogenase | VF |
| EJC48_RS00995 () | 17611..18384 | + | 774 | WP_129484000.1 | Lipid II flippase Amj | VF |
| EJC48_RS01000 () | 18413..19630 | + | 1218 | WP_039060527.1 | oligosaccharide repeat unit polymerase | - |
| EJC48_RS01005 () | 19925..20281 | + | 357 | WP_129498909.1 | hypothetical protein | - |
| EJC48_RS01010 () | 20290..20703 | + | 414 | WP_129498911.1 | glycosyltransferase | - |
| EJC48_RS01015 () | 20847..22163 | + | 1317 | WP_129498913.1 | alginate lyase family protein | - |
| EJC48_RS01020 () | 24480..24665 | + | 186 | Protein_24 | UTP--glucose-1-phosphate uridylyltransferase | VF |
| EJC48_RS01025 () | 26597..27151 | + | 555 | Protein_25 | IS6 family transposase IS15DI | Transposase |
| EJC48_RS01030 () | 27526..27978 | + | 453 | WP_000791469.1 | hypothetical protein | - |
| EJC48_RS01035 () | 27994..28596 | - | 603 | WP_000278322.1 | hypothetical protein | - |
| EJC48_RS01040 () | 28866..29147 | + | 282 | WP_000575657.1 | hypothetical protein | - |
| EJC48_RS01050 () | 29446..29982 | + | 537 | WP_000949433.1 | hypothetical protein | - |
| EJC48_RS01055 () | 29985..30995 | + | 1011 | WP_000543934.1 | IS91 family transposase ISWz1 | Transposase |
| EJC48_RS01060 () | 31000..31869 | + | 870 | WP_000997323.1 | 3'-5' exonuclease | - |
| EJC48_RS01065 () | 31866..32357 | + | 492 | WP_000139717.1 | hypothetical protein | - |
| EJC48_RS01070 () | 32674..33549 | + | 876 | WP_001097010.1 | DNA replication terminus site-binding protein | - |
| EJC48_RS01075 () | 33702..34742 | + | 1041 | WP_000101568.1 | DNA-binding protein | - |
| EJC48_RS01085 () | 35029..36540 | + | 1512 | WP_000811658.1 | ATP-dependent helicase | - |
| EJC48_RS01090 () | 36651..37691 | + | 1041 | WP_001326396.1 | conjugal transfer protein TraF | - |
| EJC48_RS01095 () | 37693..39126 | + | 1434 | WP_000256129.1 | conjugal transfer protein TraH | - |
| EJC48_RS01100 () | 39139..42753 | + | 3615 | WP_000534551.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| EJC48_RS01105 () | 42791..43153 | - | 363 | WP_000683483.1 | hypothetical protein | - |
| EJC48_RS01110 () | 43869..44141 | + | 273 | WP_000356489.1 | helix-turn-helix domain-containing protein | - |
| EJC48_RS01115 () | 44141..44674 | + | 534 | WP_000790610.1 | transglycosylase SLT domain-containing protein | - |
| EJC48_RS01120 () | 44685..45293 | + | 609 | WP_000891157.1 | hypothetical protein | - |
| EJC48_RS01125 () | 45290..45841 | + | 552 | WP_001348533.1 | hypothetical protein | - |
| EJC48_RS01130 () | 45901..46320 | - | 420 | WP_000651490.1 | H-NS histone family protein | - |
| EJC48_RS01135 () | 46322..46615 | - | 294 | WP_000919078.1 | hypothetical protein | - |
| EJC48_RS01140 () | 46632..47615 | - | 984 | WP_000077457.1 | ParM/StbA family protein | - |
| EJC48_RS01145 () | 48114..48653 | + | 540 | WP_001447712.1 | hypothetical protein | - |
| EJC48_RS01150 () | 48658..48945 | + | 288 | WP_000127321.1 | hypothetical protein | - |
| EJC48_RS01155 () | 48930..50030 | + | 1101 | WP_001348532.1 | hypothetical protein | - |
| EJC48_RS01170 () | 51067..51501 | - | 435 | WP_004201092.1 | hypothetical protein | - |
| EJC48_RS01175 () | 51519..52634 | - | 1116 | WP_000946104.1 | phosphoadenosine phosphosulfate reductase family protein | - |
| EJC48_RS01180 () | 52902..53510 | + | 609 | WP_000849069.1 | hypothetical protein | - |
| EJC48_RS01185 () | 53515..54036 | + | 522 | WP_000393783.1 | hypothetical protein | - |
| EJC48_RS01190 () | 54039..54560 | + | 522 | WP_000648873.1 | hypothetical protein | - |
| EJC48_RS01195 () | 54657..55130 | + | 474 | WP_000057876.1 | hypothetical protein | - |
| EJC48_RS01200 () | 55141..55434 | + | 294 | WP_001370730.1 | hypothetical protein | - |
| EJC48_RS01205 () | 55439..56293 | + | 855 | WP_129483998.1 | hypothetical protein | - |
| EJC48_RS01210 () | 56293..57252 | + | 960 | WP_000829617.1 | S49 family peptidase | - |
| EJC48_RS01215 () | 57268..58128 | + | 861 | WP_000139696.1 | DsbA family protein | - |
| EJC48_RS01220 () | 58162..58590 | + | 429 | WP_000591076.1 | hypothetical protein | - |
| EJC48_RS01225 () | 58648..59007 | + | 360 | WP_000422769.1 | hypothetical protein | - |
| EJC48_RS01230 () | 59096..59503 | + | 408 | WP_129498915.1 | Fe3+-siderophore ABC transporter permease | - |
| EJC48_RS01235 () | 59500..60018 | + | 519 | WP_000210757.1 | nitrite reductase | - |
| EJC48_RS01240 () | 60018..60248 | + | 231 | WP_000972665.1 | hypothetical protein | - |
| EJC48_RS01245 () | 60235..61092 | + | 858 | WP_001167036.1 | hypothetical protein | - |
| EJC48_RS26390 () | 61004..61309 | + | 306 | WP_171820680.1 | hypothetical protein | - |
| EJC48_RS01255 () | 61312..61839 | + | 528 | WP_001210659.1 | thermonuclease family protein | - |
| EJC48_RS01260 () | 61897..62169 | + | 273 | WP_001043046.1 | HU family DNA-binding protein | - |
| EJC48_RS01265 () | 62258..62551 | + | 294 | WP_001239998.1 | hypothetical protein | - |
| EJC48_RS01270 () | 62578..62880 | - | 303 | WP_000124640.1 | XRE family transcriptional regulator | Antitoxin Detail |
| EJC48_RS01275 () | 62885..63235 | - | 351 | WP_000270043.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| EJC48_RS01280 () | 63398..63946 | + | 549 | WP_001061573.1 | hypothetical protein | - |
| EJC48_RS01290 () | 64287..64481 | + | 195 | WP_000343597.1 | hypothetical protein | - |
| EJC48_RS01295 () | 64492..64863 | + | 372 | WP_000516918.1 | hypothetical protein | - |
| EJC48_RS01300 () | 64856..65326 | + | 471 | WP_001281821.1 | hypothetical protein | - |
| EJC48_RS01305 () | 65341..65676 | - | 336 | WP_000683477.1 | hypothetical protein | - |
| EJC48_RS01310 () | 65773..66261 | + | 489 | WP_001273096.1 | DUF1643 domain-containing protein | - |
| EJC48_RS01315 () | 66264..66761 | + | 498 | WP_000062185.1 | hypothetical protein | - |
| EJC48_RS01325 () | 67323..68255 | + | 933 | WP_000434070.1 | hypothetical protein | - |
| EJC48_RS01330 () | 68329..69792 | + | 1464 | WP_001280522.1 | AAA family ATPase | - |
| EJC48_RS26395 () | 69854..70246 | + | 393 | WP_000018404.1 | hypothetical protein | - |
| EJC48_RS26400 () | 70295..70489 | + | 195 | WP_000757530.1 | DUF2997 domain-containing protein | - |
| EJC48_RS26405 () | 70483..71667 | + | 1185 | WP_000245300.1 | hypothetical protein | - |
| EJC48_RS01350 () | 71679..72026 | + | 348 | WP_000039129.1 | hypothetical protein | - |
| EJC48_RS01355 () | 72023..72451 | + | 429 | WP_000988988.1 | hypothetical protein | - |
| EJC48_RS01360 () | 72444..73007 | + | 564 | WP_000004671.1 | hypothetical protein | - |
| EJC48_RS01365 () | 73019..73588 | + | 570 | WP_001256126.1 | hypothetical protein | - |
| EJC48_RS01370 () | 73591..74136 | + | 546 | WP_000435225.1 | hypothetical protein | - |
| EJC48_RS01375 () | 74253..75191 | + | 939 | WP_000268394.1 | chromosome partitioning protein ParB | - |
| EJC48_RS01380 () | 75191..75388 | + | 198 | WP_000532167.1 | hypothetical protein | - |
| EJC48_RS01390 () | 75626..75868 | + | 243 | WP_001096360.1 | hypothetical protein | - |
| EJC48_RS01395 () | 75871..76233 | + | 363 | WP_001258026.1 | hypothetical protein | - |
| EJC48_RS01400 () | 76226..77470 | + | 1245 | WP_000098294.1 | site-specific DNA-methyltransferase | - |
| EJC48_RS01405 () | 77484..77933 | + | 450 | WP_001053910.1 | hypothetical protein | - |
| EJC48_RS01410 () | 77915..78226 | + | 312 | WP_000380893.1 | hypothetical protein | - |
| EJC48_RS01415 () | 78400..79185 | + | 786 | WP_001151305.1 | Sporulation initiation inhibitor protein Soj | VF |
| EJC48_RS01420 () | 79189..80370 | + | 1182 | WP_001207227.1 | ParB/RepB/Spo0J family partition protein | - |
| EJC48_RS01425 () | 80419..80691 | + | 273 | WP_000703827.1 | helix-turn-helix domain-containing protein | - |
| EJC48_RS01430 () | 80744..81379 | - | 636 | WP_000074431.1 | N-6 DNA methylase | - |
| EJC48_RS26185 () | 81471..81614 | - | 144 | WP_000939033.1 | hypothetical protein | - |
| EJC48_RS01435 () | 81941..82318 | + | 378 | WP_001125904.1 | hypothetical protein | - |
| EJC48_RS26410 () | 82311..82592 | + | 282 | WP_000044823.1 | hypothetical protein | - |
| EJC48_RS01445 () | 82567..83241 | + | 675 | WP_000344149.1 | hypothetical protein | - |
| EJC48_RS01450 () | 83309..83740 | + | 432 | WP_001326170.1 | hypothetical protein | - |
| EJC48_RS01455 () | 83746..84057 | + | 312 | WP_002210541.1 | hypothetical protein | - |
| EJC48_RS01460 () | 84066..84566 | + | 501 | WP_000647188.1 | hypothetical protein | - |
| EJC48_RS01465 () | 84570..85997 | + | 1428 | WP_000936897.1 | DNA cytosine methyltransferase | - |
| EJC48_RS01470 () | 85997..86653 | + | 657 | WP_000268552.1 | hypothetical protein | - |
| EJC48_RS01475 () | 86708..87325 | + | 618 | WP_000464630.1 | hypothetical protein | - |
| EJC48_RS01485 () | 87537..87836 | + | 300 | WP_001326171.1 | hypothetical protein | - |
| EJC48_RS01490 () | 87927..88415 | - | 489 | WP_000467110.1 | hypothetical protein | - |
| EJC48_RS01495 () | 88430..90622 | - | 2193 | WP_000366823.1 | DNA topoisomerase 3 | - |
| EJC48_RS01500 () | 90622..90855 | - | 234 | WP_001191890.1 | hypothetical protein | - |
| EJC48_RS01505 () | 90837..91454 | - | 618 | WP_001249395.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|