MGE detailed information
MGE type: Prophage MGE length: 42404 bp
Accession: NZ_CP034213 Location: 415144..457547 Organism: Escherichia albertii strain NCTC 9362 Replicon: chromosome
Accession: NZ_CP034213 Location: 415144..457547 Organism: Escherichia albertii strain NCTC 9362 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DSB70_RS02105 () | 410797..411318 | + | 522 | WP_001295503.1 | crossover junction endodeoxyribonuclease RuvC | - |
| DSB70_RS02110 () | 411320..411733 | - | 414 | Protein_412 | YebB family permuted papain-like enzyme | - |
| DSB70_RS02120 () | 412344..412562 | + | 219 | WP_125059236.1 | hypothetical protein | - |
| DSB70_RS02125 () | 412584..413195 | + | 612 | WP_000580343.1 | Holliday junction branch migration protein RuvA | - |
| DSB70_RS02130 () | 413204..414214 | + | 1011 | WP_000568517.1 | Holliday junction branch migration DNA helicase RuvB | - |
| DSB70_RS02135 () | 414362..415147 | - | 786 | WP_000571487.1 | zinc ABC transporter permease subunit ZnuB | - |
| DSB70_RS02140 () | 415144..415899 | - | 756 | WP_000203005.1 | Zinc import ATP-binding protein ZnuC | VF |
| DSB70_RS02145 () | 415978..416910 | + | 933 | WP_125060726.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| DSB70_RS02150 () | 416926..418248 | + | 1323 | WP_001184057.1 | murein DD-endopeptidase MepM | - |
| DSB70_RS02155 () | 418366..419340 | + | 975 | WP_125059238.1 | Lipid A biosynthesis myristoyltransferase | VF |
| DSB70_RS02160 () | 419483..420925 | - | 1443 | WP_125059241.1 | pyruvate kinase | - |
| DSB70_RS02165 () | 421052..421921 | - | 870 | WP_001056700.1 | DNA-binding transcriptional regulator HexR | - |
| DSB70_RS02170 () | 422269..423744 | + | 1476 | WP_125059243.1 | glucose-6-phosphate dehydrogenase | - |
| DSB70_RS02175 () | 423979..425790 | + | 1812 | WP_001069473.1 | phosphogluconate dehydratase | - |
| DSB70_RS02180 () | 425829..426470 | + | 642 | WP_000800512.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| DSB70_RS02185 () | 426525..427703 | - | 1179 | WP_125059245.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| DSB70_RS02190 () | 427837..428127 | + | 291 | WP_000257734.1 | DNA damage-inducible protein YebG | - |
| DSB70_RS02195 () | 428194..428550 | + | 357 | WP_002462313.1 | protein YebF | - |
| DSB70_RS02200 () | 428864..429691 | + | 828 | Protein_430 | oligopeptidase B | - |
| DSB70_RS02210 () | 430994..432235 | + | 1242 | Protein_432 | prolyl oligopeptidase family serine peptidase | - |
| DSB70_RS02215 () | 432232..432894 | - | 663 | WP_025238865.1 | exodeoxyribonuclease X | - |
| DSB70_RS02220 () | 432918..433574 | - | 657 | WP_125059247.1 | carbon-nitrogen hydrolase family protein YobB | - |
| DSB70_RS02225 () | 433676..433906 | - | 231 | WP_000916758.1 | DNA polymerase III subunit theta | - |
| DSB70_RS02230 () | 434045..434422 | + | 378 | WP_000741562.1 | CopC domain-containing protein YobA | - |
| DSB70_RS02235 () | 434426..435298 | + | 873 | WP_059244199.1 | copper homeostasis membrane protein CopD | - |
| DSB70_RS02240 () | 435311..435652 | + | 342 | WP_000976487.1 | DUF2511 domain-containing protein | - |
| - | 435682..435914 | - | 233 | - | - | Antitoxin Detail |
| - | 435809..435912 | + | 104 | - | - | Toxin Detail |
| DSB70_RS02245 () | 436534..437112 | + | 579 | WP_164474073.1 | hypothetical protein | VF |
| DSB70_RS23655 () | 437569..437733 | + | 165 | WP_157944741.1 | hypothetical protein | - |
| DSB70_RS02255 () | 438699..439011 | + | 313 | Protein_441 | potassium transporter TrkG | - |
| DSB70_RS23660 () | 439623..439826 | + | 204 | WP_164474050.1 | hypothetical protein | - |
| DSB70_RS02265 () | 440418..440987 | + | 570 | WP_059218704.1 | Effector protein NleF | VF |
| DSB70_RS02270 () | 441081..441737 | + | 657 | WP_025238869.1 | protein-serine/threonine phosphatase | - |
| DSB70_RS02275 () | 441738..441929 | - | 192 | WP_025238870.1 | YebW family protein | - |
| DSB70_RS02280 () | 442035..442271 | - | 237 | WP_125059249.1 | DUF1480 family protein | - |
| DSB70_RS02285 () | 442389..443828 | - | 1440 | WP_125060728.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| DSB70_RS02290 () | 443908..446541 | - | 2634 | WP_125059251.1 | hypothetical protein | VF |
| DSB70_RS02295 () | 446510..447793 | - | 1284 | WP_059238746.1 | membrane integrity lipid transport subunit YebS | - |
| DSB70_RS02300 () | 447923..448420 | + | 498 | WP_001043892.1 | L-methionine (R)-S-oxide reductase | - |
| DSB70_RS02305 () | 448517..449215 | + | 699 | WP_000431383.1 | RNA chaperone ProQ | - |
| DSB70_RS02310 () | 449235..451283 | + | 2049 | WP_125059253.1 | carboxy terminal-processing peptidase | - |
| DSB70_RS02320 () | 451463..451921 | + | 459 | WP_000526135.1 | IS200-IS605 family transposase IS200C | Transposase |
| DSB70_RS02335 () | 452186..453067 | + | 882 | WP_000984517.1 | protease HtpX | - |
| DSB70_RS02340 () | 453112..454485 | - | 1374 | WP_059220018.1 | MFS transporter | - |
| DSB70_RS02345 () | 454663..455454 | + | 792 | WP_125059255.1 | DNA-binding transcriptional regulator KdgR | - |
| DSB70_RS02350 () | 455612..455851 | - | 240 | WP_001211014.1 | YobH family protein | - |
| DSB70_RS02355 () | 456010..456153 | + | 144 | WP_000714546.1 | PhoP/PhoQ regulator MgrB | - |
| DSB70_RS02360 () | 456228..456515 | + | 288 | WP_001006859.1 | YebO family protein | - |
| DSB70_RS02365 () | 457183..457325 | + | 143 | Protein_461 | DUF2627 domain-containing protein | - |
| DSB70_RS02370 () | 457338..457547 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| DSB70_RS02375 () | 457713..458522 | + | 810 | WP_125059257.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| DSB70_RS02380 () | 458519..459085 | - | 567 | WP_002462302.1 | manganese efflux pump MntP | - |
| DSB70_RS02385 () | 459502..459960 | - | 459 | WP_125059259.1 | DUF986 family protein | - |
| DSB70_RS02390 () | 460015..460866 | - | 852 | WP_001331209.1 | PTS mannose transporter subunit IID | - |
| DSB70_RS02395 () | 460879..461679 | - | 801 | WP_000406456.1 | PTS mannose transporter subunit IIC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|