MGE detailed information
MGE type: Prophage MGE length: 60917 bp
Accession: NZ_CP034213 Location: 1035555..1096471 Organism: Escherichia albertii strain NCTC 9362 Replicon: chromosome
Accession: NZ_CP034213 Location: 1035555..1096471 Organism: Escherichia albertii strain NCTC 9362 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DSB70_RS05280 () | 1030564..1031934 | + | 1371 | WP_000423734.1 | adenylosuccinate lyase | - |
| DSB70_RS05285 () | 1032102..1032773 | + | 672 | WP_001265484.1 | two-component system response regulator PhoP | - |
| DSB70_RS05290 () | 1032773..1034233 | + | 1461 | WP_125059620.1 | two-component system sensor histidine kinase PhoQ | - |
| DSB70_RS05295 () | 1034309..1035430 | + | 1122 | WP_125059622.1 | [50S ribosomal protein L16]-arginine 3-hydroxylase | - |
| DSB70_RS05300 () | 1035555..1036784 | - | 1230 | WP_000359426.1 | peptidase T | - |
| DSB70_RS05305 () | 1037034..1038170 | + | 1137 | WP_000531605.1 | Spermidine/putrescine import ATP-binding protein PotA | VF |
| DSB70_RS05310 () | 1038154..1039017 | + | 864 | WP_000799420.1 | spermidine/putrescine ABC transporter permease PotB | - |
| DSB70_RS05315 () | 1039380..1039691 | + | 312 | Protein_1054 | hypothetical protein | VF |
| DSB70_RS23705 () | 1040460..1041536 | + | 1077 | Protein_1056 | hypothetical protein | VF |
| DSB70_RS05340 () | 1042804..1043886 | - | 1083 | WP_277425017.1 | ISNCY family transposase KIS | Transposase |
| DSB70_RS05345 () | 1043951..1044550 | - | 600 | WP_125059626.1 | Outer membrane protein X | VF |
| DSB70_RS05350 () | 1044620..1048111 | - | 3492 | WP_125059627.1 | host specificity protein J | - |
| DSB70_RS05355 () | 1048454..1049035 | - | 582 | WP_241201516.1 | tail assembly protein | - |
| DSB70_RS05360 () | 1049032..1049775 | - | 744 | WP_001375575.1 | C40 family peptidase | - |
| DSB70_RS05365 () | 1049781..1050479 | - | 699 | WP_125059628.1 | phage minor tail protein L | - |
| DSB70_RS05370 () | 1050479..1050820 | - | 342 | WP_125059629.1 | phage tail protein | - |
| DSB70_RS05375 () | 1050813..1054055 | - | 3243 | WP_125059630.1 | phage tail tape measure protein | - |
| DSB70_RS05380 () | 1054103..1054312 | - | 210 | WP_125060744.1 | DUF4035 domain-containing protein | - |
| DSB70_RS05385 () | 1054408..1054782 | - | 375 | WP_001030043.1 | phage tail assembly chaperone | - |
| DSB70_RS05390 () | 1054788..1055504 | - | 717 | WP_001275508.1 | major tail subunit | - |
| DSB70_RS05395 () | 1055571..1055915 | - | 345 | WP_000133388.1 | DUF3168 domain-containing protein | - |
| DSB70_RS05400 () | 1055912..1056358 | - | 447 | WP_000573374.1 | HK97 gp10 family phage protein | - |
| DSB70_RS05405 () | 1056355..1056705 | - | 351 | WP_001007905.1 | phage head closure protein | - |
| DSB70_RS05410 () | 1056715..1057041 | - | 327 | WP_024228536.1 | head-tail connector protein | - |
| DSB70_RS05415 () | 1057038..1059459 | - | 2422 | Protein_1073 | phage portal protein | - |
| DSB70_RS05420 () | 1059405..1059626 | - | 222 | WP_001063107.1 | hypothetical protein | - |
| DSB70_RS05425 () | 1059671..1061596 | - | 1926 | WP_125059631.1 | phage major capsid protein | - |
| DSB70_RS05430 () | 1061660..1063321 | - | 1662 | WP_001365116.1 | terminase large subunit | - |
| DSB70_RS05435 () | 1063318..1063881 | - | 564 | WP_125059632.1 | terminase small subunit | - |
| DSB70_RS05445 () | 1064173..1064538 | - | 366 | WP_053884978.1 | HNH endonuclease | - |
| DSB70_RS05450 () | 1064580..1064780 | + | 201 | WP_000095746.1 | YlcI/YnfO family protein | - |
| DSB70_RS05455 () | 1065035..1065220 | - | 186 | WP_012816791.1 | Rz1 family lipoprotein | - |
| DSB70_RS05465 () | 1065443..1065574 | - | 132 | WP_001280922.1 | hypothetical protein | - |
| DSB70_RS05470 () | 1065669..1066364 | - | 696 | WP_000661712.1 | phage antirepressor protein | - |
| DSB70_RS05475 () | 1066638..1067171 | - | 534 | WP_125059633.1 | lysozyme | - |
| DSB70_RS05480 () | 1067222..1067566 | - | 345 | WP_000731192.1 | YdfR family protein | - |
| DSB70_RS05485 () | 1067571..1067786 | - | 216 | WP_000284518.1 | class II holin family protein | - |
| DSB70_RS05490 () | 1067936..1069789 | - | 1854 | WP_125059634.1 | SASA family carbohydrate esterase | - |
| DSB70_RS05495 () | 1070197..1070364 | - | 168 | WP_000216623.1 | DUF3927 family protein | - |
| DSB70_RS05500 () | 1070361..1070792 | - | 432 | WP_125059635.1 | tellurite resistance TerB family protein | - |
| DSB70_RS05505 () | 1071100..1071474 | - | 375 | WP_032258101.1 | helix-turn-helix transcriptional regulator | - |
| DSB70_RS05510 () | 1071535..1071795 | - | 261 | WP_000573777.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| DSB70_RS05515 () | 1071902..1072967 | - | 1066 | Protein_1091 | site-specific DNA-methyltransferase | - |
| DSB70_RS05520 () | 1073118..1073315 | - | 198 | WP_000917767.1 | hypothetical protein | - |
| DSB70_RS05525 () | 1073531..1073911 | - | 381 | WP_001204806.1 | antiterminator Q family protein | - |
| DSB70_RS05530 () | 1073929..1074978 | - | 1050 | WP_125059636.1 | DUF968 domain-containing protein | - |
| DSB70_RS05535 () | 1074980..1075258 | - | 279 | WP_001341388.1 | hypothetical protein | - |
| DSB70_RS05540 () | 1075426..1075581 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | Toxin Detail |
| - | 1075593..1075651 | + | 59 | - | - | Antitoxin Detail |
| DSB70_RS05545 () | 1075828..1075932 | - | 105 | WP_001278454.1 | hypothetical protein | - |
| DSB70_RS05550 () | 1076048..1076632 | - | 585 | WP_000206794.1 | DUF551 domain-containing protein | - |
| DSB70_RS05555 () | 1076689..1077084 | - | 396 | WP_001118161.1 | DUF977 family protein | - |
| DSB70_RS05560 () | 1077100..1077825 | - | 726 | WP_046122919.1 | DUF1627 domain-containing protein | - |
| DSB70_RS05565 () | 1077847..1078593 | - | 747 | WP_125059637.1 | IS21 family transposase ISAba8 | Transposase |
| DSB70_RS05570 () | 1078600..1079670 | - | 1071 | WP_001262374.1 | hypothetical protein | - |
| DSB70_RS05575 () | 1079742..1080167 | - | 426 | WP_000693883.1 | toxin YdaT family protein | - |
| DSB70_RS05580 () | 1080151..1080432 | - | 282 | WP_000391950.1 | YdaS family helix-turn-helix protein | - |
| DSB70_RS05585 () | 1080533..1080952 | + | 420 | WP_000362155.1 | hypothetical protein | - |
| DSB70_RS05590 () | 1081218..1081373 | + | 156 | WP_000379575.1 | DUF1391 family protein | - |
| DSB70_RS24495 () | 1081375..1081503 | + | 129 | WP_000344964.1 | protein YdfB | - |
| DSB70_RS05595 () | 1081533..1081751 | + | 219 | WP_001171946.1 | protein YdfC | - |
| DSB70_RS05605 () | 1082320..1082508 | + | 189 | WP_001358566.1 | cell division inhibition protein DicB | - |
| DSB70_RS05610 () | 1082505..1082696 | + | 192 | WP_016231063.1 | lysis protein YdfD | - |
| DSB70_RS05615 () | 1082789..1084456 | + | 1668 | Protein_1111 | exonuclease | - |
| DSB70_RS05625 () | 1085767..1086573 | + | 807 | Protein_1113 | 3'-5' exoribonuclease | - |
| DSB70_RS05630 () | 1086635..1086904 | + | 270 | WP_000003742.1 | excisionase | - |
| DSB70_RS05635 () | 1086873..1087991 | + | 1119 | WP_000074981.1 | hypothetical protein ; Integrase | Integrase |
| DSB70_RS05640 () | 1088158..1088952 | + | 795 | WP_000580318.1 | spermidine/putrescine ABC transporter permease PotC | - |
| DSB70_RS05645 () | 1088949..1089995 | + | 1047 | WP_000759312.1 | spermidine/putrescine ABC transporter substrate-binding protein PotD | - |
| DSB70_RS05650 () | 1090053..1090319 | + | 267 | Protein_1118 | DUF3592 domain-containing protein | - |
| DSB70_RS05655 () | 1090377..1091590 | + | 1214 | WP_164474079.1 | IS3 family transposase IS629 | Transposase |
| DSB70_RS05660 () | 1091633..1091827 | + | 195 | Protein_1120 | DUF3592 domain-containing protein | - |
| DSB70_RS05665 () | 1091824..1092612 | + | 789 | WP_000720231.1 | TPM domain-containing protein | - |
| DSB70_RS05670 () | 1092750..1093571 | - | 822 | WP_000952753.1 | NAD-dependent protein deacylase | - |
| DSB70_RS05675 () | 1093587..1094498 | - | 912 | WP_025237155.1 | N-acetylglucosamine kinase | - |
| DSB70_RS05680 () | 1094526..1095770 | - | 1245 | WP_001251383.1 | lipoprotein-releasing ABC transporter permease subunit LolE | - |
| DSB70_RS05685 () | 1095770..1096471 | - | 702 | WP_001059716.1 | Lipoprotein-releasing system ATP-binding protein LolD | VF |
| DSB70_RS05690 () | 1096464..1097663 | - | 1200 | WP_000284708.1 | lipoprotein-releasing ABC transporter permease subunit LolC | - |
| DSB70_RS05695 () | 1097987..1101433 | + | 3447 | WP_125059638.1 | transcription-repair coupling factor | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|