NZ_CP0341793586960..3773867

MGE detailed information

MGE type: Integrative_Conjugative_Elements        MGE length: 186908 bp
Accession: NZ_CP034179        Location: 3586960..3773867         Organism: Novosphingobium tardaugens NBRC 16725       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
EGO55_RS16850 () 3583157..3584536 - 1380 WP_021688202.1 phosphate ABC transporter permease subunit PstC -
EGO55_RS16855 () 3584551..3585606 - 1056 WP_021688201.1 substrate-binding domain-containing protein -
EGO55_RS16860 () 3585682..3586881 - 1200 WP_021688200.1 two-component sensor histidine kinase -
EGO55_RS16865 () 3587564..3587911 + 348 WP_021688199.1 hypothetical protein -
EGO55_RS16870 () 3588096..3589076 + 981 WP_021688198.1 toprim domain-containing protein -
EGO55_RS16875 () 3589113..3590273 + 1161 WP_210766560.1 PRTRC system ParB family protein -
EGO55_RS21025 () 3590225..3590749 + 525 WP_210766561.1 hypothetical protein -
EGO55_RS16880 () 3590787..3591224 + 438 WP_013846913.1 PRTRC system protein E -
EGO55_RS16885 () 3591274..3591480 + 207 WP_013846912.1 hypothetical protein -
EGO55_RS16890 () 3591700..3592647 + 948 WP_021688196.1 hypothetical protein -
EGO55_RS16895 () 3592656..3593486 + 831 WP_021688195.1 PRTRC system protein B -
EGO55_RS16900 () 3593483..3594142 + 660 WP_021688194.1 PRTRC system protein A -
EGO55_RS16905 () 3594132..3594890 + 759 WP_021688193.1 PRTRC system ThiF family protein -
EGO55_RS16910 () 3595003..3595278 + 276 WP_013846907.1 hypothetical protein -
EGO55_RS16915 () 3595275..3595559 + 285 WP_021688191.1 hypothetical protein -
EGO55_RS16920 () 3595620..3596111 + 492 WP_021688190.1 hypothetical protein -
EGO55_RS16925 () 3596108..3597346 + 1239 WP_021688189.1 hypothetical protein -
EGO55_RS16930 () 3597467..3602638 + 5172 WP_021688188.1 helicase -
EGO55_RS16935 () 3602866..3603144 + 279 WP_030090519.1 DUF1778 domain-containing protein Antitoxin Detail
EGO55_RS16940 () 3603141..3603668 + 528 WP_030090520.1 hypothetical protein Toxin Detail
EGO55_RS16945 () 3604004..3604345 + 342 WP_021688185.1 sigma-70 family RNA polymerase sigma factor -
EGO55_RS16950 () 3604773..3605993 + 1221 WP_021688184.1 hypothetical protein -
EGO55_RS16955 () 3606217..3606864 + 648 WP_021688183.1 hypothetical protein -
EGO55_RS16960 () 3606876..3607337 + 462 WP_021688182.1 hypothetical protein -
EGO55_RS16965 () 3607381..3608136 + 756 WP_021688181.1 hypothetical protein -
EGO55_RS16970 () 3608142..3608621 + 480 WP_021688180.1 hypothetical protein -
EGO55_RS16975 () 3608730..3609131 + 402 WP_021688179.1 hypothetical protein -
EGO55_RS16980 () 3609272..3609466 + 195 WP_021688178.1 hypothetical protein -
EGO55_RS16985 () 3609599..3611083 + 1485 WP_021688177.1 DUF3560 domain-containing protein -
EGO55_RS20760 () 3611080..3611586 + 507 WP_021688176.1 hypothetical protein -
EGO55_RS16995 () 3611589..3612029 + 441 WP_021688175.1 hypothetical protein -
EGO55_RS17000 () 3612177..3613877 + 1701 WP_021688174.1 ATP-binding protein -
EGO55_RS17005 () 3613950..3614540 + 591 WP_021688173.1 DUF1419 domain-containing protein -
EGO55_RS17010 () 3614585..3614944 + 360 WP_040714537.1 hypothetical protein -
EGO55_RS17015 () 3615210..3615749 + 540 WP_021688171.1 hypothetical protein -
EGO55_RS17020 () 3615746..3616111 + 366 WP_021688170.1 hypothetical protein -
EGO55_RS17025 () 3616195..3616617 + 423 WP_021688169.1 hypothetical protein -
EGO55_RS17030 () 3616614..3616814 + 201 WP_021688168.1 hypothetical protein -
EGO55_RS17035 () 3616879..3617067 + 189 WP_021688167.1 hypothetical protein -
EGO55_RS17040 () 3617096..3617290 + 195 WP_021688166.1 hypothetical protein -
EGO55_RS17045 () 3617287..3617835 + 549 WP_021688165.1 hypothetical protein -
EGO55_RS17050 () 3617911..3618426 + 516 WP_021688164.1 hypothetical protein -
EGO55_RS17055 () 3618505..3618906 + 402 WP_021688163.1 hypothetical protein -
EGO55_RS20765 () 3619192..3619629 + 438 WP_174391286.1 hypothetical protein -
EGO55_RS17065 () 3619747..3619998 + 252 WP_021688161.1 type II toxin-antitoxin system prevent-host-death family antitoxin -
EGO55_RS17070 () 3619988..3620410 + 423 WP_021688160.1 putative toxin-antitoxin system toxin component, PIN family -
EGO55_RS20715 () 3620437..3620586 - 150 WP_021688159.1 hypothetical protein -
EGO55_RS17075 () 3620879..3621274 - 396 WP_021688158.1 hypothetical protein -
EGO55_RS17080 () 3621361..3621615 + 255 WP_030090527.1 hypothetical protein -
EGO55_RS17085 () 3622190..3622669 + 480 WP_021688156.1 DUF736 domain-containing protein -
EGO55_RS17090 () 3622751..3623776 + 1026 WP_021688155.1 DUF2493 domain-containing protein -
EGO55_RS17095 () 3623941..3624264 - 324 WP_021688154.1 hypothetical protein -
EGO55_RS17100 () 3624730..3625029 + 300 WP_021688153.1 ribbon-helix-helix protein, CopG family -
EGO55_RS17105 () 3625202..3627352 + 2151 WP_021243122.1 type IV secretion system DNA-binding domain-containing protein -
EGO55_RS17110 () 3627349..3630342 + 2994 WP_021688152.1 relaxase domain-containing protein -
EGO55_RS17115 () 3630352..3630942 + 591 WP_021688151.1 restriction endonuclease -
EGO55_RS17120 () 3630939..3631496 + 558 WP_021688150.1 hypothetical protein VF
EGO55_RS21030 () 3631741..3632790 - 1050 WP_021688149.1 GTP-binding protein -
EGO55_RS20625 () 3632811..3632987 + 177 WP_021688148.1 hypothetical protein -
EGO55_RS17135 () 3633041..3633769 + 729 WP_021243116.1 LuxR family transcriptional regulator -
EGO55_RS21035 () 3635873..3637306 + 1434 WP_169534382.1 AAA family ATPase -
EGO55_RS17155 () 3637303..3638610 + 1308 WP_021243114.1 hypothetical protein -
EGO55_RS17160 () 3638891..3640147 - 1257 WP_021243113.1 IS701 family transposase ISNha2 Transposase
EGO55_RS17165 () 3640235..3641016 - 782 Protein_3400 IS5 family transposase -
EGO55_RS17170 () 3641133..3641360 + 228 WP_021692050.1 hypothetical protein -
EGO55_RS17175 () 3641485..3642741 - 1257 WP_021243113.1 IS701 family transposase ISNha2 Transposase
EGO55_RS17180 () 3642920..3644176 - 1257 WP_021243113.1 IS701 family transposase ISNha2 Transposase
EGO55_RS17185 () 3644355..3645611 - 1257 WP_021243113.1 IS701 family transposase ISNha2 Transposase
EGO55_RS17190 () 3645790..3647046 - 1257 WP_021243113.1 IS701 family transposase ISNha2 Transposase
EGO55_RS17195 () 3647595..3649976 + 2382 WP_021690818.1 phosphoenolpyruvate synthase -
EGO55_RS17200 () 3650273..3651286 + 1014 WP_021690817.1 universal stress protein -
EGO55_RS17205 () 3651290..3659701 + 8412 WP_021690816.1 hypothetical protein VF
EGO55_RS17210 () 3659813..3660049 + 237 WP_013846854.1 hypothetical protein -
EGO55_RS17215 () 3660104..3660430 + 327 WP_013846853.1 TraR/DksA family transcriptional regulator -
EGO55_RS17220 () 3660503..3661963 - 1461 WP_021243108.1 bifunctional aminoglycoside phosphotransferase/ATP-binding protein -
EGO55_RS17225 () 3662064..3662558 - 495 WP_021243107.1 hypothetical protein VF
EGO55_RS17230 () 3663426..3664925 + 1500 WP_210766753.1 PAS domain S-box protein -
EGO55_RS17235 () 3664915..3665529 + 615 WP_021243105.1 hypothetical protein VF
EGO55_RS17240 () 3665616..3666023 + 408 WP_021243104.1 hypothetical protein VF
EGO55_RS17245 () 3666071..3666481 + 411 WP_013846847.1 group II truncated hemoglobin -
EGO55_RS17250 () 3666522..3667364 + 843 WP_031290279.1 zinc-binding alcohol dehydrogenase family protein -
EGO55_RS17260 () 3668244..3669530 + 1287 WP_171905900.1 IS701 family transposase ISNha1 Transposase
EGO55_RS17270 () 3669909..3670742 + 834 WP_013846845.1 universal stress protein -
EGO55_RS17275 () 3670779..3671816 + 1038 WP_021246214.1 zinc-dependent alcohol dehydrogenase family protein -
EGO55_RS17280 () 3671867..3673384 + 1518 WP_031291850.1 thymidine phosphorylase family protein -
EGO55_RS17285 () 3673381..3674298 + 918 WP_021246216.1 ribose-phosphate diphosphokinase -
EGO55_RS17290 () 3674349..3675170 + 822 WP_021690811.1 universal stress protein -
EGO55_RS17295 () 3675291..3677996 + 2706 WP_031291852.1 HAD-IC family P-type ATPase -
EGO55_RS17300 () 3677993..3678904 + 912 WP_021246219.1 universal stress protein -
EGO55_RS17305 () 3678901..3679869 + 969 WP_021246220.1 calcium/sodium antiporter -
EGO55_RS17310 () 3680119..3681048 + 930 WP_021690810.1 1-phosphofructokinase family hexose kinase -
EGO55_RS17315 () 3681173..3681526 - 354 WP_021246222.1 carboxymuconolactone decarboxylase family protein -
EGO55_RS17320 () 3681544..3682809 - 1266 WP_021246223.1 TolC family outer membrane protein -
EGO55_RS17325 () 3682806..3683009 - 204 WP_021246224.1 DUF2892 domain-containing protein -
EGO55_RS17330 () 3683050..3684330 - 1281 WP_031291854.1 NAD(P)/FAD-dependent oxidoreductase -
EGO55_RS17335 () 3684414..3684752 + 339 WP_021246226.1 rhodanese-like domain-containing protein -
EGO55_RS17340 () 3684792..3685841 + 1050 WP_021246227.1 efflux RND transporter periplasmic adaptor subunit -
EGO55_RS17345 () 3685838..3689044 + 3207 WP_021246228.1 efflux RND transporter permease subunit -
EGO55_RS17350 () 3689044..3689364 + 321 WP_210766754.1 metalloregulator ArsR/SmtB family transcription factor -
EGO55_RS17355 () 3689537..3689941 + 405 WP_021246230.1 hypothetical protein -
EGO55_RS17360 () 3689956..3690357 - 402 WP_021246231.1 hypothetical protein -
EGO55_RS17365 () 3690516..3691578 - 1063 Protein_3439 IS630 family transposase -
EGO55_RS17370 () 3691752..3692168 - 417 WP_021246236.1 hypothetical protein -
EGO55_RS17375 () 3692254..3692748 - 495 WP_037446399.1 DNA starvation/stationary phase protection protein -
EGO55_RS17380 () 3692756..3693544 - 789 WP_021246238.1 TlpA family protein disulfide reductase -
EGO55_RS17385 () 3693557..3693667 - 111 WP_021246239.1 cytochrome bd-I oxidase subunit CydX -
EGO55_RS17390 () 3693680..3694828 - 1149 WP_021690809.1 cytochrome d ubiquinol oxidase subunit II -
EGO55_RS17395 () 3694841..3696427 - 1587 WP_021246241.1 cytochrome ubiquinol oxidase subunit I -
EGO55_RS17400 () 3696542..3698098 + 1557 WP_210766562.1 thiol reductant ABC exporter subunit CydD -
EGO55_RS17405 () 3698095..3699711 + 1617 WP_021690807.1 Vitamin B12 import ATP-binding protein BtuD VF
EGO55_RS17410 () 3699859..3701121 + 1263 WP_210766563.1 MgtC/SapB family protein -
EGO55_RS17415 () 3701284..3701526 - 243 WP_021690806.1 YdcH family protein -
EGO55_RS17420 () 3701618..3703219 - 1602 WP_021690805.1 MBL fold metallo-hydrolase -
EGO55_RS17425 () 3703436..3703663 + 228 WP_021246247.1 hypothetical protein -
EGO55_RS17430 () 3703641..3704012 - 372 WP_021246248.1 metalloregulator ArsR/SmtB family transcription factor -
EGO55_RS17435 () 3704012..3704632 - 621 WP_210766755.1 peroxiredoxin -
EGO55_RS17440 () 3704784..3705227 + 444 WP_021246250.1 thioredoxin TrxC -
EGO55_RS17445 () 3705437..3706081 + 645 WP_021690804.1 peroxiredoxin -
EGO55_RS17450 () 3706153..3707073 + 921 WP_021690803.1 MBL fold metallo-hydrolase -
EGO55_RS17455 () 3707078..3707866 + 789 WP_021246253.1 sulfite exporter TauE/SafE family protein -
EGO55_RS17460 () 3707895..3708755 + 861 WP_021246254.1 class I SAM-dependent methyltransferase -
EGO55_RS17465 () 3708781..3709032 + 252 WP_021246255.1 hypothetical protein -
EGO55_RS17470 () 3709026..3709742 - 717 WP_021690801.1 energy transducer TonB -
EGO55_RS17475 () 3709749..3711983 - 2235 WP_021246257.1 TonB-dependent receptor -
EGO55_RS17480 () 3712051..3712449 - 399 WP_021246258.1 hypothetical protein -
EGO55_RS17485 () 3712510..3713748 - 1239 WP_021246259.1 TolC family protein -
EGO55_RS17490 () 3713748..3714047 - 300 WP_021246260.1 DUF3240 family protein -
EGO55_RS17495 () 3714040..3717111 - 3072 WP_021690800.1 efflux RND transporter permease subunit -
EGO55_RS17500 () 3717121..3718233 - 1113 WP_021246262.1 efflux RND transporter periplasmic adaptor subunit -
EGO55_RS17505 () 3718291..3719307 - 1017 WP_021246263.1 two-component sensor histidine kinase -
EGO55_RS17510 () 3719304..3719981 - 678 WP_021246264.1 Sensor histidine kinase RcsC VF
EGO55_RS17515 () 3720060..3720749 - 690 WP_021246265.1 cytochrome b/b6 domain-containing protein -
EGO55_RS17520 () 3720822..3721523 - 702 WP_021246266.1 VIT family protein -
EGO55_RS17525 () 3721717..3721968 - 252 WP_021246267.1 hypothetical protein -
EGO55_RS17530 () 3722463..3723113 - 651 WP_021246268.1 hypothetical protein -
EGO55_RS17535 () 3723235..3724317 - 1083 WP_021246269.1 L,D-transpeptidase -
EGO55_RS17540 () 3724457..3725314 + 858 WP_021690797.1 universal stress protein -
EGO55_RS17545 () 3725359..3726861 + 1503 WP_021246271.1 Cardiolipin synthase C VF
EGO55_RS17550 () 3726946..3727530 - 585 WP_021246272.1 hypothetical protein -
EGO55_RS17555 () 3727612..3728022 - 411 WP_021246273.1 DUF2147 domain-containing protein -
EGO55_RS17560 () 3728073..3728645 - 573 WP_021246274.1 HdeD family acid-resistance protein -
EGO55_RS17565 () 3728786..3730009 - 1224 WP_021246275.1 phospholipase A -
EGO55_RS17570 () 3730006..3731199 - 1194 WP_021246276.1 acetate/propionate family kinase -
EGO55_RS17575 () 3731196..3732617 - 1422 WP_021690796.1 bifunctional enoyl-CoA hydratase/phosphate acetyltransferase -
EGO55_RS17580 () 3732621..3734375 - 1755 WP_021246278.1 alpha/beta fold hydrolase -
EGO55_RS17585 () 3734717..3735640 + 924 WP_062066091.1 hypothetical protein VF
EGO55_RS17590 () 3735630..3736454 - 825 WP_021690795.1 TetR/AcrR family transcriptional regulator -
EGO55_RS17595 () 3736495..3737964 + 1470 WP_210766564.1 hypothetical protein VF
EGO55_RS17600 () 3737961..3739034 + 1074 WP_021246282.1 hypothetical protein VF
EGO55_RS17605 () 3739031..3741781 + 2751 WP_021246283.1 hypothetical protein VF
EGO55_RS17610 () 3741783..3742907 + 1125 WP_021246284.1 ABC transporter permease -
EGO55_RS17615 () 3743202..3743993 + 792 WP_021246285.1 LuxR family transcriptional regulator -
EGO55_RS17620 () 3744187..3744972 + 786 WP_021690794.1 type IV toxin-antitoxin system AbiEi family antitoxin -
EGO55_RS17625 () 3744977..3745897 + 921 WP_021690793.1 nucleotidyl transferase AbiEii/AbiGii toxin family protein -
EGO55_RS17630 () 3746111..3746464 - 354 WP_013846840.1 hypothetical protein -
EGO55_RS17635 () 3747062..3747520 + 459 WP_021246288.1 hypothetical protein -
EGO55_RS17640 () 3747517..3751179 - 3663 WP_210766565.1 conjugal transfer protein TraG N-terminal domain-containing protein -
EGO55_RS17645 () 3751302..3752726 - 1425 WP_021246290.1 conjugal transfer protein TraH -
EGO55_RS17650 () 3752772..3753356 - 585 WP_021246291.1 hypothetical protein -
EGO55_RS17655 () 3753353..3754225 - 873 WP_021246292.1 conjugal transfer protein TraF -
EGO55_RS17660 () 3754222..3754833 - 612 WP_021246293.1 S26 family signal peptidase -
EGO55_RS17665 () 3754805..3755539 - 735 WP_210766566.1 type-F conjugative transfer system pilin assembly protein TrbC -
EGO55_RS17670 () 3755658..3756776 - 1119 WP_021246295.1 conjugal transfer protein TraN -
EGO55_RS17675 () 3756773..3758716 - 1944 WP_013846831.1 hypothetical protein -
EGO55_RS17680 () 3759036..3760034 - 999 WP_021690790.1 TraU family protein -
EGO55_RS17685 () 3760049..3760714 - 666 WP_021246297.1 conjugal transfer protein TraW -
EGO55_RS17690 () 3760704..3760940 - 237 WP_021246298.1 hypothetical protein -
EGO55_RS17695 () 3760937..3761446 - 510 WP_037484338.1 hypothetical protein -
EGO55_RS17700 () 3761443..3761856 - 414 WP_021246300.1 hypothetical protein -
EGO55_RS17705 () 3761853..3762179 - 327 WP_013846825.1 hypothetical protein -
EGO55_RS17710 () 3762176..3764692 - 2517 WP_021246302.1 TraC family protein -
EGO55_RS17715 () 3764689..3765276 - 588 WP_031291881.1 TraV family lipoprotein -
EGO55_RS17720 () 3765312..3766625 - 1314 WP_021246304.1 TraB/VirB10 family protein -
EGO55_RS17725 () 3766622..3767389 - 768 WP_021246305.1 type-F conjugative transfer system secretin TraK -
EGO55_RS17730 () 3767373..3768011 - 639 WP_021246306.1 sex pilus assembly and synthesis protein -
EGO55_RS17735 () 3768020..3768286 - 267 WP_013846819.1 membrane protein -
EGO55_RS17740 () 3768423..3768740 - 318 WP_013846818.1 hypothetical protein -
EGO55_RS17745 () 3768922..3769704 - 783 WP_021246307.1 DsbC family protein -
EGO55_RS17750 () 3769691..3769996 - 306 WP_037484342.1 hypothetical protein -
EGO55_RS17755 () 3770446..3770835 + 390 WP_021246309.1 helix-turn-helix domain-containing protein -
EGO55_RS17760 () 3770909..3771577 + 669 WP_021690788.1 MobA/MobL family protein -
EGO55_RS17765 () 3772334..3772537 + 204 WP_021246311.1 excisionase -
EGO55_RS17770 () 3772498..3773634 + 1137 WP_021246312.1 Tyrosine recombinase XerC ; Integrase Integrase
EGO55_RS17785 () 3774115..3775908 - 1794 WP_040716104.1 single-stranded-DNA-specific exonuclease RecJ -
EGO55_RS17790 () 3776188..3777255 + 1068 WP_021690785.1 hypothetical protein -
EGO55_RS17795 () 3777304..3777732 + 429 WP_021690784.1 NAD(P)H-dependent oxidoreductase -
EGO55_RS17800 () 3777922..3778596 + 675 WP_040716102.1 hypothetical protein -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance