MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 185779 bp
Accession: NZ_CP034147 Location: 1177511..1363289 Organism: Helicobacter pylori strain HP14039 Replicon: chromosome
Accession: NZ_CP034147 Location: 1177511..1363289 Organism: Helicobacter pylori strain HP14039 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EAL91_RS05825 () | 1172975..1173958 | - | 984 | WP_121053595.1 | RluA family pseudouridine synthase | - |
| EAL91_RS08225 () | 1174092..1175277 | + | 1186 | Protein_1084 | 50S ribosome-binding GTPase | - |
| EAL91_RS05840 () | 1175300..1176445 | + | 1146 | WP_080120996.1 | rod shape-determining protein RodA | - |
| EAL91_RS05850 () | 1176507..1177436 | - | 930 | WP_002205701.1 | ribose-phosphate pyrophosphokinase | - |
| EAL91_RS05855 () | 1177528..1178013 | - | 486 | WP_121053597.1 | HIT domain-containing protein | - |
| EAL91_RS05860 () | 1178023..1179504 | - | 1482 | WP_121053599.1 | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase | - |
| EAL91_RS05865 () | 1179491..1180216 | - | 726 | WP_121053601.1 | lipase EstV | - |
| EAL91_RS05870 () | 1180217..1181260 | - | 1044 | WP_121053603.1 | D-alanine--D-alanine ligase | - |
| EAL91_RS05875 () | 1181337..1181813 | - | 477 | WP_121053605.1 | phosphatidylglycerophosphatase A | - |
| EAL91_RS05880 () | 1181962..1183071 | + | 1110 | WP_121053607.1 | alanine--glyoxylate aminotransferase family protein | - |
| EAL91_RS05885 () | 1183080..1183541 | + | 462 | WP_121053609.1 | phosphoribosyltransferase | - |
| EAL91_RS05890 () | 1183543..1184862 | + | 1320 | WP_121053611.1 | 30S ribosomal protein S12 methylthiotransferase RimO | - |
| EAL91_RS05895 () | 1184973..1186843 | + | 1871 | Protein_1095 | 50S ribosome-binding GTPase | - |
| EAL91_RS05900 () | 1186833..1188515 | + | 1683 | WP_121053613.1 | 50S ribosome-binding GTPase | - |
| EAL91_RS05905 () | 1188641..1188946 | + | 306 | WP_000491659.1 | hypothetical protein | - |
| EAL91_RS05910 () | 1188955..1190022 | + | 1068 | WP_121053615.1 | ATP-binding protein | - |
| EAL91_RS05915 () | 1190058..1191074 | + | 1017 | WP_121053617.1 | tRNA lysidine(34) synthetase TilS | - |
| EAL91_RS05920 () | 1191162..1192148 | + | 987 | WP_121053619.1 | tRNA-dihydrouridine synthase | - |
| EAL91_RS05925 () | 1192118..1193047 | + | 930 | WP_121053621.1 | outer membrane beta-barrel protein | - |
| EAL91_RS05930 () | 1193269..1195233 | + | 1965 | WP_121053623.1 | hypothetical protein | VF |
| EAL91_RS05935 () | 1195304..1196632 | - | 1329 | WP_121053625.1 | anaerobic C4-dicarboxylate transporter | - |
| EAL91_RS05940 () | 1196720..1197712 | + | 993 | WP_121053628.1 | type II asparaginase | - |
| EAL91_RS05945 () | 1197758..1198201 | - | 444 | WP_121053629.1 | hypothetical protein | - |
| EAL91_RS05950 () | 1198384..1198836 | - | 453 | WP_121053631.1 | DUF1104 domain-containing protein | - |
| EAL91_RS05955 () | 1198865..1199287 | - | 423 | WP_029650946.1 | DUF1104 domain-containing protein | - |
| EAL91_RS05960 () | 1199551..1200183 | + | 633 | WP_121053633.1 | LysE/ArgO family amino acid transporter | - |
| EAL91_RS05965 () | 1200252..1201982 | + | 1731 | WP_121053636.1 | DNA polymerase III subunit gamma/tau | - |
| EAL91_RS05970 () | 1201979..1202380 | + | 402 | WP_001200913.1 | tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE | - |
| EAL91_RS05975 () | 1202393..1203115 | + | 723 | WP_000353246.1 | Lipopolysaccharide export system ATP-binding protein LptB | VF |
| EAL91_RS05980 () | 1203118..1204362 | + | 1245 | WP_121053638.1 | RNA polymerase sigma-54 factor | VF |
| EAL91_RS05985 () | 1204374..1205078 | - | 705 | WP_129484926.1 | Fic family protein | - |
| EAL91_RS05990 () | 1205078..1206298 | - | 1221 | WP_121053642.1 | HD family hydrolase | - |
| EAL91_RS05995 () | 1206505..1208601 | - | 2097 | WP_121053644.1 | hypothetical protein | VF |
| EAL91_RS06000 () | 1208755..1209099 | - | 345 | WP_001022679.1 | hypothetical protein | - |
| EAL91_RS06005 () | 1209120..1210046 | - | 927 | WP_121053646.1 | 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH | - |
| EAL91_RS06010 () | 1210218..1211039 | - | 822 | WP_164997412.1 | hypothetical protein | VF |
| EAL91_RS06015 () | 1211204..1214029 | + | 2826 | WP_207208527.1 | UvrABC system protein A | VF |
| EAL91_RS08230 () | 1214189..1214485 | + | 297 | WP_164997369.1 | hypothetical protein | - |
| EAL91_RS08285 () | 1214707..1214913 | - | 207 | Protein_1121 | hypothetical protein | - |
| EAL91_RS08290 () | 1214979..1215165 | - | 187 | Protein_1122 | hypothetical protein | - |
| EAL91_RS08295 () | 1215369..1215521 | - | 153 | WP_207208528.1 | hypothetical protein | - |
| EAL91_RS06030 () | 1215693..1216838 | - | 1146 | WP_121053650.1 | Regulatory protein AtoC | VF |
| EAL91_RS06035 () | 1216835..1217308 | - | 474 | WP_164997440.1 | hypothetical protein | - |
| EAL91_RS06040 () | 1217308..1219791 | - | 2484 | WP_121053654.1 | DNA topoisomerase (ATP-hydrolyzing) subunit A | - |
| EAL91_RS06045 () | 1219807..1220193 | - | 387 | WP_078303956.1 | diacylglycerol kinase | - |
| EAL91_RS06050 () | 1220186..1221214 | - | 1029 | WP_121053657.1 | hypothetical protein | - |
| EAL91_RS06055 () | 1221224..1221415 | - | 192 | WP_079305299.1 | DUF262 domain-containing protein | - |
| EAL91_RS06060 () | 1221606..1222106 | - | 501 | WP_025275921.1 | acetone carboxylase subunit gamma | - |
| EAL91_RS06065 () | 1222123..1224420 | - | 2298 | WP_121053660.1 | hydantoinase B/oxoprolinase family protein | - |
| EAL91_RS06070 () | 1224432..1226573 | - | 2142 | WP_121053662.1 | hydantoinase/oxoprolinase family protein | - |
| EAL91_RS06075 () | 1226804..1227814 | - | 1011 | WP_121053664.1 | lipid A deacylase LpxR family protein | - |
| EAL91_RS06080 () | 1227942..1229306 | - | 1365 | WP_121053666.1 | TIGR00366 family protein | - |
| EAL91_RS06085 () | 1229326..1229949 | - | 624 | WP_121053668.1 | CoA transferase subunit B | - |
| EAL91_RS06090 () | 1229946..1230644 | - | 699 | WP_121053670.1 | CoA transferase subunit A | - |
| EAL91_RS06095 () | 1230655..1231830 | - | 1176 | WP_121053672.1 | acetyl-CoA C-acetyltransferase | - |
| EAL91_RS06100 () | 1232209..1233021 | - | 813 | WP_025448769.1 | 3'-5' exonuclease | - |
| EAL91_RS06105 () | 1233164..1235092 | + | 1929 | WP_121053703.1 | ferrous iron transport protein B | - |
| EAL91_RS06110 () | 1235344..1237647 | + | 2304 | WP_121053674.1 | Fe(3+) dicitrate transport protein FecA | VF |
| EAL91_RS06115 () | 1237686..1238432 | - | 747 | WP_001210287.1 | Flagellar biosynthetic protein FliP | VF |
| EAL91_RS06120 () | 1238465..1238563 | - | 99 | WP_121053676.1 | flagellar biosynthesis protein flip | - |
| EAL91_RS06125 () | 1238520..1239821 | + | 1302 | WP_121053678.1 | Bifunctional protein GlmU | VF |
| EAL91_RS06130 () | 1240133..1240513 | + | 381 | WP_164997413.1 | pantothenate kinase | - |
| EAL91_RS06135 () | 1240553..1241047 | + | 495 | WP_121053682.1 | hypothetical protein | - |
| EAL91_RS06140 () | 1241213..1243579 | + | 2367 | WP_121053684.1 | ribonucleoside-diphosphate reductase subunit alpha | - |
| EAL91_RS06145 () | 1243640..1244587 | + | 948 | WP_121053687.1 | UDP-N-acetyl-2-amino-2-deoxy-D-glucuronate oxidase | VF |
| EAL91_RS06150 () | 1244700..1245467 | + | 768 | WP_121053690.1 | sulfite exporter TauE/SafE family protein | - |
| EAL91_RS06155 () | 1245471..1245977 | + | 507 | WP_121053691.1 | methylated-DNA--[protein]-cysteine S-methyltransferase | - |
| EAL91_RS06160 () | 1246037..1247104 | - | 1068 | WP_121053693.1 | Tyrosine recombinase XerH ; Integrase | Integrase |
| EAL91_RS06165 () | 1247125..1247334 | - | 210 | Protein_1151 | hypothetical protein | - |
| EAL91_RS06170 () | 1247545..1248717 | - | 1173 | WP_121053695.1 | pyridoxal phosphate-dependent aminotransferase | - |
| EAL91_RS06175 () | 1248876..1249688 | - | 813 | WP_000714998.1 | hypothetical protein | VF |
| EAL91_RS06180 () | 1249810..1251159 | - | 1350 | WP_129484909.1 | hypothetical protein | - |
| EAL91_RS06185 () | 1251156..1255968 | - | 4813 | Protein_1155 | DEAD/DEAH box helicase | - |
| EAL91_RS06190 () | 1256046..1257347 | - | 1302 | WP_121054675.1 | (Fe-S)-binding protein | - |
| EAL91_RS06195 () | 1257344..1258717 | - | 1374 | WP_121054674.1 | oxygen-independent coproporphyrinogen III oxidase | - |
| EAL91_RS06200 () | 1258717..1259232 | - | 516 | WP_097700581.1 | DUF2603 domain-containing protein | - |
| EAL91_RS06205 () | 1259269..1260366 | - | 1098 | WP_121054673.1 | chorismate synthase | - |
| EAL91_RS06210 () | 1260363..1261082 | - | 720 | WP_164997414.1 | ribonuclease III | - |
| EAL91_RS06215 () | 1261093..1261524 | - | 432 | WP_121054671.1 | ribonuclease HI | - |
| EAL91_RS06220 () | 1261525..1262535 | - | 1011 | WP_121054670.1 | hypothetical protein | - |
| EAL91_RS06225 () | 1262546..1263808 | - | 1263 | WP_121054669.1 | SurA protein | - |
| EAL91_RS06230 () | 1263808..1265232 | - | 1425 | WP_164997415.1 | Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB | - |
| EAL91_RS06235 () | 1265232..1266533 | - | 1302 | WP_121054667.1 | insulinase family protein | - |
| EAL91_RS06240 () | 1266539..1267600 | - | 1062 | WP_001873862.1 | dehypoxanthine futalosine cyclase | - |
| EAL91_RS06245 () | 1267602..1270361 | - | 2760 | WP_164997416.1 | outer membrane protein assembly factor BamA | - |
| EAL91_RS06250 () | 1270399..1271481 | - | 1083 | WP_121054678.1 | aminofutalosine synthase MqnE | - |
| EAL91_RS06255 () | 1271783..1272286 | + | 504 | WP_121054666.1 | ferritin | - |
| EAL91_RS06260 () | 1272301..1272924 | + | 624 | WP_108321239.1 | phosphoserine phosphatase SerB | - |
| EAL91_RS06265 () | 1272962..1274350 | + | 1389 | WP_129484911.1 | Alpha-(1,3)-fucosyltransferase FucT | VF |
| EAL91_RS06270 () | 1274359..1274949 | - | 591 | WP_121054677.1 | uracil-DNA glycosylase family protein | - |
| EAL91_RS06275 () | 1274994..1276400 | - | 1407 | WP_001217501.1 | aspartate ammonia-lyase | - |
| EAL91_RS06280 () | 1276458..1277726 | - | 1269 | WP_121054664.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| EAL91_RS06285 () | 1277729..1278136 | - | 408 | WP_121054663.1 | hypothetical protein | - |
| EAL91_RS06290 () | 1278148..1278969 | - | 822 | WP_121054662.1 | UTP--glucose-1-phosphate uridylyltransferase | VF |
| EAL91_RS06295 () | 1278966..1280648 | - | 1683 | WP_121054661.1 | lytic transglycosylase domain-containing protein | - |
| EAL91_RS06300 () | 1280657..1280950 | - | 294 | WP_121054660.1 | YggT family protein | - |
| EAL91_RS06305 () | 1280947..1282266 | - | 1320 | WP_121054659.1 | glutamate--tRNA ligase | - |
| EAL91_RS06310 () | 1282431..1282925 | - | 495 | Protein_1180 | nitroreductase family protein | - |
| EAL91_RS06315 () | 1282979..1283743 | + | 765 | WP_033756322.1 | hypothetical protein | - |
| EAL91_RS06320 () | 1283755..1285671 | + | 1917 | WP_129484913.1 | hypothetical protein | - |
| EAL91_RS06325 () | 1285661..1285963 | + | 303 | WP_120914043.1 | TrbC/VirB2 family protein | - |
| EAL91_RS06330 () | 1285964..1286224 | + | 261 | WP_000602757.1 | hypothetical protein | - |
| EAL91_RS06335 () | 1286237..1288735 | + | 2499 | WP_129484915.1 | Type IV secretion system protein PtlC | VF |
| EAL91_RS06340 () | 1288728..1290662 | + | 1935 | WP_033756459.1 | type IA DNA topoisomerase | - |
| EAL91_RS06345 () | 1290792..1291778 | + | 987 | WP_033756316.1 | hypothetical protein | VF |
| EAL91_RS06350 () | 1291778..1293319 | + | 1542 | WP_033758579.1 | hypothetical protein | VF |
| EAL91_RS06355 () | 1293316..1294551 | + | 1236 | WP_033756314.1 | Type IV secretion system protein virB10 | VF |
| EAL91_RS06360 () | 1294621..1294917 | + | 297 | WP_000773935.1 | hypothetical protein | - |
| EAL91_RS06365 () | 1294907..1295170 | + | 264 | WP_033756313.1 | hypothetical protein | - |
| EAL91_RS06370 () | 1295167..1295466 | + | 300 | WP_000660142.1 | hypothetical protein | - |
| EAL91_RS06375 () | 1295466..1296407 | + | 942 | WP_033756312.1 | Type IV secretion system protein VirB11 | VF |
| EAL91_RS06380 () | 1296404..1296859 | + | 456 | WP_033756311.1 | hypothetical protein | - |
| EAL91_RS06385 () | 1296856..1297146 | + | 291 | WP_033756309.1 | hypothetical protein | - |
| EAL91_RS06390 () | 1297147..1297704 | + | 558 | WP_033756307.1 | hypothetical protein | - |
| EAL91_RS06395 () | 1297705..1299450 | + | 1746 | WP_033756306.1 | Protein VirD4 | VF |
| EAL91_RS06400 () | 1299688..1299969 | - | 282 | WP_033756305.1 | type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family | Toxin Detail |
| EAL91_RS06405 () | 1299962..1300276 | - | 315 | WP_033756304.1 | hypothetical protein | Antitoxin Detail |
| EAL91_RS06410 () | 1300566..1302479 | + | 1914 | WP_033756303.1 | relaxase/mobilization nuclease domain-containing protein | - |
| EAL91_RS06415 () | 1302504..1303682 | - | 1179 | WP_033756301.1 | hypothetical protein | - |
| EAL91_RS06420 () | 1303726..1304010 | - | 285 | WP_000394655.1 | hypothetical protein ; Integrase | Integrase |
| EAL91_RS06425 () | 1304092..1304748 | - | 657 | WP_108363218.1 | ParA family protein | - |
| EAL91_RS06430 () | 1305015..1313438 | - | 8424 | WP_129484917.1 | DEAD/DEAH box helicase family protein | - |
| EAL91_RS06435 () | 1313592..1314629 | + | 1038 | WP_033757650.1 | hypothetical protein | - |
| EAL91_RS06440 () | 1314630..1315952 | + | 1323 | WP_033763607.1 | hypothetical protein | - |
| EAL91_RS06445 () | 1316013..1318223 | + | 2211 | WP_121054774.1 | competence protein | - |
| EAL91_RS06450 () | 1318227..1319612 | + | 1386 | WP_033757644.1 | hypothetical protein | - |
| EAL91_RS08300 () | 1319612..1320283 | + | 672 | WP_207208529.1 | hypothetical protein | - |
| EAL91_RS08305 () | 1320196..1320810 | + | 615 | WP_195742770.1 | hypothetical protein | - |
| EAL91_RS06460 () | 1320875..1321951 | - | 1077 | WP_000749462.1 | Tyrosine recombinase XerH ; Integrase | Integrase |
| EAL91_RS06465 () | 1322243..1322409 | - | 167 | Protein_1212 | nitroreductase family protein | - |
| EAL91_RS06470 () | 1322411..1323268 | - | 858 | WP_121054414.1 | NAD(P)-dependent oxidoreductase | - |
| EAL91_RS06475 () | 1323285..1325010 | - | 1726 | Protein_1214 | polynucleotide adenylyltransferase | - |
| EAL91_RS06480 () | 1325073..1325750 | + | 678 | WP_121054413.1 | 7-cyano-7-deazaguanine synthase QueC | - |
| EAL91_RS06485 () | 1325786..1326685 | - | 900 | Protein_1216 | hypothetical protein | VF |
| EAL91_RS06490 () | 1326894..1327340 | + | 447 | WP_121054412.1 | hypothetical protein | - |
| EAL91_RS06495 () | 1327456..1327887 | + | 432 | WP_121054411.1 | hypothetical protein | - |
| EAL91_RS06500 () | 1327892..1329430 | - | 1539 | WP_121054410.1 | protein hydE | - |
| EAL91_RS06505 () | 1329432..1329968 | - | 537 | WP_121054409.1 | hydrogenase biosynthesis protein HydD | - |
| EAL91_RS06510 () | 1329965..1330639 | - | 675 | WP_121054408.1 | Ni/Fe-hydrogenase, b-type cytochrome subunit | - |
| EAL91_RS06515 () | 1330652..1332388 | - | 1737 | WP_121054407.1 | nickel-dependent hydrogenase large subunit | - |
| EAL91_RS06520 () | 1332398..1333552 | - | 1155 | WP_108374693.1 | hydrogenase 1 small subunit | - |
| EAL91_RS06525 () | 1333712..1334296 | + | 585 | WP_121054406.1 | NAD(P)H-dependent oxidoreductase | - |
| EAL91_RS06530 () | 1334341..1336383 | - | 2043 | WP_121054405.1 | DUF262 domain-containing protein | - |
| EAL91_RS06535 () | 1336618..1337676 | - | 1059 | WP_121054404.1 | Putative beta-lactamase HcpD | VF |
| EAL91_RS06540 () | 1337688..1338893 | - | 1206 | WP_121054403.1 | 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase | - |
| EAL91_RS06545 () | 1338896..1339975 | - | 1080 | WP_121054402.1 | flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase | - |
| EAL91_RS06550 () | 1340128..1341255 | + | 1128 | WP_121054401.1 | succinyldiaminopimelate transaminase | - |
| EAL91_RS06555 () | 1341248..1342597 | + | 1350 | WP_121054400.1 | UDP-N-acetylmuramate--L-alanine ligase | - |
| EAL91_RS06560 () | 1342597..1342965 | + | 369 | WP_121054399.1 | hypothetical protein | - |
| EAL91_RS06565 () | 1342980..1345226 | + | 2247 | WP_121054398.1 | endonuclease MutS2 | - |
| EAL91_RS06575 () | 1345367..1345888 | - | 522 | WP_001047008.1 | inorganic diphosphatase | - |
| EAL91_RS06580 () | 1345944..1346738 | - | 795 | WP_121054396.1 | hypothetical protein | VF |
| EAL91_RS06585 () | 1346680..1347237 | - | 558 | WP_121054395.1 | glycosyltransferase family 25 protein | - |
| EAL91_RS06590 () | 1347285..1348283 | - | 999 | WP_121054394.1 | hypothetical protein | VF |
| EAL91_RS06595 () | 1348308..1348883 | - | 576 | WP_121054393.1 | adenylate kinase | - |
| EAL91_RS06600 () | 1348900..1350633 | - | 1734 | WP_121054392.1 | aspartate--tRNA ligase | - |
| EAL91_RS06605 () | 1350668..1351609 | - | 942 | WP_033583847.1 | Chemotaxis protein CheV | VF |
| EAL91_RS06610 () | 1351687..1353657 | + | 1971 | WP_121054391.1 | NAD-dependent DNA ligase LigA | - |
| EAL91_RS06615 () | 1353764..1354096 | + | 333 | WP_033762686.1 | hypothetical protein | - |
| EAL91_RS06620 () | 1354392..1355093 | + | 702 | WP_000625011.1 | ABC transporter ATP-binding protein | - |
| EAL91_RS06625 () | 1355093..1355848 | + | 756 | WP_121054390.1 | ABC transporter permease | - |
| EAL91_RS06630 () | 1355911..1365468 | - | 9558 | WP_121054389.1 | vacuolating cytotoxin domain-containing protein | - |
| EAL91_RS06635 () | 1365631..1366200 | - | 570 | WP_121054388.1 | outer membrane beta-barrel protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|