MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 39003 bp
Accession: NZ_CP034081 Location: 1..39003 Organism: Pseudomonas syringae pv. pisi str. PP1 Replicon: plasmid pPP1-3
Accession: NZ_CP034081 Location: 1..39003 Organism: Pseudomonas syringae pv. pisi str. PP1 Replicon: plasmid pPP1-3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N032_RS28390 () | 87..245 | - | 159 | WP_155007603.1 | hypothetical protein | - |
| N032_RS28395 () | 293..463 | - | 171 | WP_164490407.1 | hypothetical protein | - |
| N032_RS27915 () | 625..924 | - | 300 | WP_124733766.1 | hypothetical protein | - |
| N032_RS27920 () | 1056..1370 | - | 315 | WP_124733767.1 | hypothetical protein | - |
| N032_RS27925 () | 1531..1755 | - | 225 | WP_124733768.1 | hypothetical protein | - |
| N032_RS27930 () | 1903..2262 | - | 360 | WP_024650438.1 | hypothetical protein | - |
| N032_RS27935 () | 2439..4478 | - | 2040 | WP_024650439.1 | type I DNA topoisomerase | - |
| N032_RS27940 () | 4571..5155 | - | 585 | WP_024650440.1 | hypothetical protein | - |
| N032_RS27945 () | 5148..5597 | - | 450 | WP_024650441.1 | hypothetical protein | - |
| N032_RS27950 () | 5597..6562 | - | 966 | WP_024650442.1 | ParB N-terminal domain-containing protein | - |
| N032_RS27955 () | 6562..7389 | - | 828 | WP_024650443.1 | ParA family protein | - |
| N032_RS27960 () | 7392..9548 | - | 2157 | WP_050585237.1 | TraM recognition domain-containing protein | - |
| N032_RS27965 () | 11127..11894 | + | 768 | WP_024650138.1 | hypothetical protein | - |
| N032_RS27970 () | 11891..12922 | + | 1032 | WP_024650139.1 | Putative conjugal transfer protein | VF |
| N032_RS27975 () | 13460..13699 | + | 240 | WP_024650140.1 | hypothetical protein | - |
| N032_RS27980 () | 14025..14279 | - | 255 | WP_024650141.1 | hypothetical protein | - |
| N032_RS27985 () | 14376..14747 | + | 372 | WP_024650142.1 | hypothetical protein | - |
| N032_RS27990 () | 14744..15058 | + | 315 | WP_024650143.1 | hypothetical protein | - |
| N032_RS27995 () | 15061..17649 | + | 2589 | WP_024650144.1 | hypothetical protein | - |
| N032_RS28000 () | 17654..18517 | + | 864 | WP_024650145.1 | hypothetical protein | - |
| N032_RS28005 () | 18528..19016 | + | 489 | WP_024650146.1 | hypothetical protein | - |
| N032_RS28010 () | 19016..20206 | + | 1191 | WP_024650147.1 | type IV secretion system protein | - |
| N032_RS28015 () | 20217..20990 | + | 774 | WP_024650148.1 | hypothetical protein | - |
| N032_RS28020 () | 20993..21832 | + | 840 | WP_024650149.1 | TrbG/VirB9 family P-type conjugative transfer protein | - |
| N032_RS28025 () | 21842..23257 | + | 1416 | WP_080271122.1 | TrbI/VirB10 family protein | - |
| N032_RS28030 () | 23238..23606 | + | 369 | WP_124733769.1 | hypothetical protein | - |
| N032_RS28035 () | 23991..24539 | + | 549 | WP_080271124.1 | lytic transglycosylase domain-containing protein | - |
| N032_RS28040 () | 24539..24859 | + | 321 | WP_024650153.1 | hypothetical protein | - |
| N032_RS28400 () | 24961..25251 | + | 291 | WP_024650154.1 | hypothetical protein | - |
| N032_RS28045 () | 25665..25928 | + | 264 | WP_024650155.1 | hypothetical protein | - |
| N032_RS28050 () | 26067..26315 | + | 249 | WP_024650156.1 | hypothetical protein | - |
| N032_RS28055 () | 26502..27938 | + | 1437 | WP_024650157.1 | replication initiation protein | - |
| N032_RS28060 () | 28176..28841 | + | 666 | WP_024650158.1 | hypothetical protein | - |
| N032_RS28070 () | 29405..30403 | + | 999 | WP_024650468.1 | DNA-binding protein | - |
| N032_RS28075 () | 30406..30621 | + | 216 | WP_032632253.1 | hypothetical protein | - |
| N032_RS28085 () | 31085..31372 | + | 288 | WP_024650466.1 | hypothetical protein | - |
| N032_RS28095 () | 31828..32247 | + | 420 | WP_024650465.1 | hypothetical protein | - |
| N032_RS28100 () | 32266..32505 | + | 240 | WP_024650464.1 | hypothetical protein | - |
| N032_RS28105 () | 33136..33675 | - | 540 | WP_024650461.1 | single-stranded DNA-binding protein | - |
| N032_RS28110 () | 33885..34139 | + | 255 | WP_124733773.1 | hypothetical protein | - |
| N032_RS28115 () | 34126..34497 | + | 372 | WP_024650460.1 | hypothetical protein | - |
| N032_RS28120 () | 34494..34838 | - | 345 | WP_024650459.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| N032_RS28125 () | 34831..35085 | - | 255 | WP_024650458.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| N032_RS28130 () | 35597..35902 | + | 306 | WP_024650456.1 | hypothetical protein | - |
| N032_RS28135 () | 35911..36309 | + | 399 | WP_024650455.1 | DUF1311 domain-containing protein | - |
| N032_RS28140 () | 36315..36599 | + | 285 | WP_024650454.1 | hypothetical protein | - |
| N032_RS28145 () | 36635..36931 | + | 297 | WP_024650453.1 | hypothetical protein | - |
| N032_RS28150 () | 37124..37750 | + | 627 | WP_024650451.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| N032_RS28155 () | 37858..38271 | + | 414 | WP_024650450.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|