MGE detailed information
MGE type: Conjugative plasmid MGE length: 62150 bp
Accession: NZ_CP034079 Location: 1..62150 Organism: Pseudomonas syringae pv. pisi str. PP1 Replicon: plasmid pPP1-1
Accession: NZ_CP034079 Location: 1..62150 Organism: Pseudomonas syringae pv. pisi str. PP1 Replicon: plasmid pPP1-1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N032_RS27230 () | 1..1314 | + | 1314 | WP_110768758.1 | replication initiation protein | - |
| N032_RS27235 () | 1453..1878 | + | 426 | WP_002556085.1 | S24 family peptidase | - |
| N032_RS27240 () | 1871..2119 | + | 249 | WP_024648051.1 | hypothetical protein | - |
| N032_RS27245 () | 2180..3190 | + | 1011 | WP_124733759.1 | site-specific integrase | - |
| N032_RS27250 () | 3214..5355 | + | 2142 | WP_024647850.1 | tyrosine-type recombinase/integrase | - |
| N032_RS27255 () | 5381..6211 | - | 831 | WP_005770909.1 | type III effector | - |
| N032_RS27260 () | 6358..7398 | + | 1041 | WP_080270893.1 | Y-family DNA polymerase | - |
| N032_RS27265 () | 7599..7793 | + | 195 | WP_054096784.1 | hypothetical protein | - |
| N032_RS27275 () | 8475..9704 | - | 1230 | WP_124733760.1 | IS91 family transposase | - |
| N032_RS27280 () | 9685..9966 | - | 282 | WP_024647929.1 | hypothetical protein | - |
| N032_RS27285 () | 10111..10395 | - | 285 | WP_003348777.1 | putative addiction module antidote protein | Antitoxin Detail |
| N032_RS27290 () | 10392..10691 | - | 300 | WP_011282511.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| N032_RS27295 () | 10863..11150 | + | 288 | WP_041924941.1 | hypothetical protein | - |
| N032_RS27300 () | 11202..11618 | + | 417 | WP_003348781.1 | hypothetical protein | - |
| N032_RS27310 () | 12013..12666 | + | 654 | WP_003348786.1 | AAA family ATPase | - |
| N032_RS27315 () | 12755..13006 | + | 252 | WP_003348789.1 | ribbon-helix-helix protein, CopG family | - |
| N032_RS27320 () | 13274..13915 | + | 642 | WP_058398749.1 | SOS response-associated peptidase family protein | - |
| N032_RS27325 () | 14196..14873 | + | 678 | WP_024647926.1 | site-specific integrase | - |
| N032_RS27330 () | 14952..15197 | + | 246 | WP_003348793.1 | hypothetical protein | - |
| N032_RS27335 () | 15490..15723 | + | 234 | WP_003348796.1 | hypothetical protein | - |
| N032_RS27340 () | 16077..16364 | + | 288 | WP_003319479.1 | hypothetical protein | - |
| N032_RS27345 () | 16463..16750 | + | 288 | WP_003319480.1 | hypothetical protein | - |
| N032_RS27350 () | 16923..17105 | + | 183 | WP_003348798.1 | hypothetical protein | - |
| N032_RS27355 () | 17214..17606 | + | 393 | WP_003348801.1 | DUF2513 domain-containing protein | - |
| N032_RS27360 () | 17630..17878 | + | 249 | WP_003348803.1 | hypothetical protein | - |
| N032_RS27365 () | 18467..18646 | - | 180 | Protein_25 | hypothetical protein | - |
| N032_RS27375 () | 18828..19889 | - | 1062 | Protein_26 | IS91 family transposase | - |
| N032_RS27385 () | 20247..20615 | - | 369 | WP_003348806.1 | hypothetical protein | - |
| N032_RS27390 () | 20724..21029 | - | 306 | WP_080270891.1 | recombinase family protein | - |
| N032_RS27400 () | 21252..29666 | - | 8415 | WP_124733761.1 | type III effector protein XopAD | - |
| N032_RS27405 () | 30199..30837 | - | 639 | WP_024647993.1 | recombinase family protein | - |
| N032_RS27410 () | 31128..31760 | + | 633 | WP_003381804.1 | ParA family protein | - |
| N032_RS27415 () | 31796..32050 | + | 255 | WP_003381801.1 | hypothetical protein | - |
| N032_RS27420 () | 32475..33140 | - | 666 | WP_024647998.1 | LexA family transcriptional regulator | - |
| N032_RS27425 () | 33228..33458 | + | 231 | WP_010215521.1 | helix-turn-helix domain-containing protein | - |
| N032_RS27430 () | 33810..34508 | + | 699 | WP_024650160.1 | lytic transglycosylase domain-containing protein | - |
| N032_RS27435 () | 34508..34843 | + | 336 | WP_024650161.1 | hypothetical protein | - |
| N032_RS27440 () | 34856..35256 | + | 401 | Protein_37 | VirB3 family type IV secretion system protein | - |
| N032_RS27445 () | 35192..37744 | + | 2553 | WP_024650163.1 | VirB4 family type IV secretion system protein | - |
| N032_RS27450 () | 37741..38427 | + | 687 | WP_024650164.1 | P-type DNA transfer protein VirB5 | - |
| N032_RS27455 () | 38460..38813 | + | 354 | WP_024650165.1 | hypothetical protein | - |
| N032_RS27460 () | 38824..39756 | + | 933 | WP_024650166.1 | type IV secretion system protein | - |
| N032_RS27465 () | 39824..40138 | + | 315 | WP_080271125.1 | conjugal transfer protein | - |
| N032_RS27470 () | 40176..40964 | + | 789 | WP_024650167.1 | type IV secretion system protein | - |
| N032_RS27475 () | 40954..41763 | + | 810 | WP_024650168.1 | P-type conjugative transfer protein VirB9 | - |
| N032_RS27480 () | 41750..43099 | + | 1350 | WP_024650169.1 | TrbI/VirB10 family protein | - |
| N032_RS27485 () | 43109..44164 | + | 1056 | WP_024650170.1 | P-type DNA transfer ATPase VirB11 | - |
| N032_RS27490 () | 44178..44564 | + | 387 | WP_003347401.1 | hypothetical protein | - |
| N032_RS27495 () | 44549..44905 | + | 357 | WP_024650171.1 | hypothetical protein | - |
| N032_RS27500 () | 45182..45805 | + | 624 | WP_003347396.1 | glycoside hydrolase family 25 protein | - |
| N032_RS27510 () | 46140..48191 | + | 2052 | Protein_50 | ATP-binding protein | - |
| N032_RS27515 () | 48301..48705 | + | 405 | WP_110783578.1 | hypothetical protein | - |
| N032_RS27520 () | 48817..49050 | + | 234 | WP_003347392.1 | hypothetical protein | - |
| N032_RS27525 () | 49050..50723 | + | 1674 | WP_024650172.1 | type IV secretory system conjugative DNA transfer family protein | - |
| N032_RS27530 () | 50764..51126 | + | 363 | WP_024650173.1 | Killer protein | - |
| N032_RS27535 () | 51154..53319 | + | 2166 | WP_124733762.1 | type IA DNA topoisomerase | - |
| N032_RS27540 () | 53346..53630 | + | 285 | WP_122287610.1 | hypothetical protein | - |
| N032_RS27545 () | 53658..54230 | + | 573 | WP_124733763.1 | single-stranded DNA-binding protein | - |
| N032_RS27550 () | 54571..55287 | + | 717 | WP_044422735.1 | hypothetical protein | - |
| N032_RS27555 () | 55287..55859 | + | 573 | WP_024647941.1 | hypothetical protein | - |
| N032_RS27560 () | 55907..56326 | - | 420 | WP_024647942.1 | hypothetical protein | - |
| N032_RS27565 () | 56682..57407 | + | 726 | WP_024647943.1 | relaxosome protein | - |
| N032_RS27570 () | 57397..61185 | + | 3789 | WP_124733764.1 | relaxase/mobilization nuclease domain-containing protein | - |
| N032_RS27575 () | 61313..61741 | + | 429 | WP_024648049.1 | GntR family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|