MGE detailed information
MGE type: Genomic_island MGE length: 30990 bp
Accession: NZ_CP034060 Location: 3068929..3099918 Organism: Shigella flexneri strain FDAARGOS_535 Replicon: chromosome
Accession: NZ_CP034060 Location: 3068929..3099918 Organism: Shigella flexneri strain FDAARGOS_535 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EGX88_RS17145 (3064049) | 3064049..3064582 | - | 534 | WP_000857408.1 | O-acetyl-ADP-ribose deacetylase | - |
| EGX88_RS17155 (3065887) | 3065887..3066021 | - | 135 | Protein_3000 | curli assembly protein CsgC | - |
| EGX88_RS17160 (3066080) | 3066080..3066445 | - | 366 | WP_001144017.1 | curli major subunit CsgA | - |
| EGX88_RS17165 (3066472) | 3066472..3067507 | - | 1036 | Protein_3002 | IS3 family transposase | - |
| EGX88_RS17170 (3067573) | 3067573..3067680 | - | 108 | Protein_3003 | curlin | - |
| EGX88_RS17175 (3067721) | 3067721..3068176 | - | 456 | WP_000791650.1 | curli minor subunit CsgB | - |
| EGX88_RS17180 (3068929) | 3068929..3069579 | + | 651 | WP_000481500.1 | CsgBAC operon transcriptional regulatory protein | VF |
| EGX88_RS17185 (3069584) | 3069584..3069973 | + | 390 | WP_000833287.1 | Curli production assembly/transport component CsgE | VF |
| EGX88_RS17190 (3069998) | 3069998..3070414 | + | 417 | WP_001264088.1 | Curli production assembly/transport component CsgF | VF |
| EGX88_RS17195 (3070441) | 3070441..3071216 | + | 776 | Protein_3008 | curli production assembly/transport protein CsgG | - |
| EGX88_RS17200 (3071280) | 3071280..3071771 | - | 492 | WP_001297187.1 | DUF1097 domain-containing protein | - |
| EGX88_RS17205 (3071873) | 3071873..3072427 | - | 555 | WP_001001917.1 | molecular chaperone YcdY | - |
| EGX88_RS17210 (3072451) | 3072451..3073188 | - | 738 | WP_000283673.1 | zinc-binding phosphatase | - |
| EGX88_RS17215 (3073243) | 3073243..3074181 | - | 939 | Protein_3012 | glyoxylate/hydroxypyruvate reductase GhrA | - |
| EGX88_RS17225 (3074653) | 3074653..3074934 | - | 282 | Protein_3013 | DUF4942 domain-containing protein | - |
| EGX88_RS17230 (3075216) | 3075216..3076220 | - | 1005 | WP_001179707.1 | IS110 family transposase ISSfl8 | Transposase |
| EGX88_RS17235 (3076292) | 3076292..3076852 | - | 561 | Protein_3015 | DUF4942 domain-containing protein | - |
| EGX88_RS17240 (3076937) | 3076937..3077134 | - | 198 | WP_000839282.1 | DUF957 domain-containing protein | - |
| EGX88_RS17245 (3077146) | 3077146..3077637 | - | 492 | WP_000976828.1 | DUF5983 family protein | - |
| EGX88_RS17250 (3077634) | 3077634..3078008 | - | 375 | WP_000854917.1 | TA system toxin CbtA family protein | Toxin Detail |
| EGX88_RS17255 (3078055) | 3078055..3078429 | - | 375 | WP_001280958.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| EGX88_RS17260 (3078592) | 3078592..3078813 | - | 222 | WP_001220314.1 | DUF987 domain-containing protein | - |
| EGX88_RS17265 (3078876) | 3078876..3079352 | - | 477 | WP_005011624.1 | RadC family protein | - |
| EGX88_RS17270 (3079368) | 3079368..3079841 | - | 474 | WP_005011597.1 | antirestriction protein | - |
| EGX88_RS17280 (3080183) | 3080183..3081004 | - | 822 | WP_001234584.1 | DUF932 domain-containing protein | - |
| EGX88_RS17285 (3081104) | 3081104..3081277 | - | 174 | WP_000088744.1 | DUF905 family protein | - |
| EGX88_RS26245 (3081397) | 3081397..3081660 | - | 264 | WP_000466628.1 | DNA polymerase III subunit gamma/tau | - |
| EGX88_RS17300 (3082755) | 3082755..3083824 | - | 1070 | Protein_3027 | patatin-like phospholipase family protein | - |
| EGX88_RS17305 (3083821) | 3083821..3084726 | - | 906 | WP_000203522.1 | diguanylate cyclase regulator RdcB family protein | - |
| EGX88_RS17310 (3084723) | 3084723..3087107 | - | 2385 | WP_000544701.1 | dynamin family protein | - |
| EGX88_RS17315 (3087325) | 3087325..3088197 | - | 873 | WP_005061994.1 | GTPase family protein | - |
| EGX88_RS17320 (3088282) | 3088282..3089199 | - | 918 | WP_000250228.1 | hypothetical protein | - |
| EGX88_RS17340 (3090399) | 3090399..3091001 | - | 603 | WP_000813445.1 | hypothetical protein | - |
| EGX88_RS17345 (3091096) | 3091096..3091302 | - | 207 | WP_000235221.1 | AlpA family transcriptional regulator | - |
| EGX88_RS17355 (3091443) | 3091443..3091709 | + | 267 | WP_000840364.1 | hypothetical protein | - |
| EGX88_RS17365 (3092061) | 3092061..3092186 | + | 126 | Protein_3035 | hemolysin activation protein | - |
| EGX88_RS26250 (3092532) | 3092532..3092732 | - | 201 | WP_001297219.1 | hypothetical protein | - |
| EGX88_RS17375 (3092931) | 3092931..3093500 | + | 570 | WP_000221544.1 | inovirus Gp2 family protein | - |
| EGX88_RS17380 (3093760) | 3093760..3094161 | + | 402 | WP_000270978.1 | putative zinc ribbon protein | - |
| EGX88_RS17385 (3094149) | 3094149..3094583 | + | 435 | WP_001221615.1 | zinc-ribbon domain-containing protein | - |
| EGX88_RS17395 (3094938) | 3094938..3095318 | + | 381 | WP_001171523.1 | IS66 family transposase ISEc8 | Transposase |
| EGX88_RS17400 (3095315) | 3095315..3095662 | + | 348 | WP_000612632.1 | IS66 family transposase ISEc8 | Transposase |
| EGX88_RS17405 (3095712) | 3095712..3097097 | + | 1386 | WP_000998091.1 | IS66 family transposase ISEc8 | Transposase |
| EGX88_RS26255 (3097137) | 3097137..3097214 | + | 78 | Protein_3043 | DUF6404 family protein | - |
| EGX88_RS17410 (3097336) | 3097336..3098694 | - | 1359 | WP_000823243.1 | esterase-like activity of phytase family protein | - |
| EGX88_RS17415 (3098976) | 3098976..3099107 | + | 132 | Protein_3045 | IS3 family transposase | - |
| EGX88_RS26260 (3099172) | 3099172..3099302 | + | 131 | Protein_3046 | IS5/IS1182 family transposase | - |
| EGX88_RS17425 (3099427) | 3099427..3099720 | - | 294 | WP_000239862.1 | biofilm development regulator YmgB/AriR family protein | - |
| EGX88_RS17430 (3100024) | 3100024..3100128 | - | 105 | Protein_3048 | IS3 family transposase | - |
| EGX88_RS26265 (3100397) | 3100397..3100465 | - | 69 | Protein_3049 | protein YkiE | - |
| EGX88_RS17440 (3100602) | 3100602..3101123 | + | 522 | WP_001283626.1 | RNA polymerase sigma factor FecI | - |
| EGX88_RS17445 (3101120) | 3101120..3102073 | + | 954 | WP_001068910.1 | ferric citrate uptake sigma factor regulator FecR | - |
| EGX88_RS17450 (3102160) | 3102160..3104484 | + | 2325 | WP_134797139.1 | TonB-dependent Fe(3+) dicitrate receptor FecA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|