MGE detailed information
MGE type: IScluster/Tn MGE length: 21498 bp
Accession: NZ_CP034059 Location: 69111..90608 Organism: Shigella flexneri strain FDAARGOS_535 Replicon: plasmid unnamed1
Accession: NZ_CP034059 Location: 69111..90608 Organism: Shigella flexneri strain FDAARGOS_535 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EGX88_RS00475 (EGX88_00470) | 64196..65038 | - | 843 | WP_000931197.1 | polysaccharide deacetylase family protein | - |
| EGX88_RS00485 (EGX88_00480) | 65521..68433 | + | 2913 | WP_167697595.1 | ankyrin repeat domain-containing protein | - |
| EGX88_RS00490 (EGX88_00485) | 68463..68787 | - | 325 | Protein_86 | IS3 family transposase | - |
| EGX88_RS00495 (EGX88_00490) | 68785..68976 | + | 192 | Protein_87 | IS66 family insertion sequence element accessory protein TnpB | - |
| EGX88_RS25880 | 68990..69070 | - | 81 | Protein_88 | hypothetical protein | - |
| EGX88_RS00500 (EGX88_00495) | 69111..70320 | - | 1210 | Protein_89 | IS3 family transposase | - |
| EGX88_RS00505 (EGX88_00500) | 70377..71645 | - | 1269 | Protein_90 | IS4 family transposase IS4 | Transposase |
| EGX88_RS00510 (EGX88_00505) | 71708..71974 | - | 267 | Protein_91 | IS66 family transposase ISCro1 | Transposase |
| EGX88_RS00515 (EGX88_00515) | 72330..72920 | - | 591 | WP_000705601.1 | Protein kinase OspG | VF |
| EGX88_RS25885 | 73003..73172 | - | 170 | Protein_93 | type II toxin-antitoxin system toxin YacB | - |
| EGX88_RS00525 (EGX88_00525) | 73172..73441 | - | 270 | Protein_94 | type II toxin-antitoxin system antitoxin YacA | - |
| EGX88_RS00530 (EGX88_00530) | 73649..75286 | - | 1638 | WP_000936806.1 | E3 ubiquitin-protein ligase ipaH9.8 | VF |
| EGX88_RS00535 (EGX88_00535) | 75548..75655 | - | 108 | WP_023592908.1 | transposase domain-containing protein | - |
| EGX88_RS00540 (EGX88_00540) | 75679..75984 | - | 306 | WP_001159860.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| EGX88_RS00545 (EGX88_00545) | 75986..76204 | - | 219 | WP_000813626.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| EGX88_RS00550 (EGX88_00550) | 76740..77693 | - | 954 | Protein_99 | IS66 family transposase ISEc49 | Transposase |
| EGX88_RS00555 (EGX88_00555) | 77749..78446 | + | 698 | WP_223368647.1 | IS1 family transposase IS1X2 | Transposase |
| EGX88_RS00565 (EGX88_00565) | 78672..78947 | - | 276 | WP_000421262.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| EGX88_RS00570 (EGX88_00570) | 78947..79231 | - | 285 | WP_024260696.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| EGX88_RS00580 (EGX88_00580) | 79683..79934 | + | 252 | WP_001381727.1 | transporter | - |
| EGX88_RS00585 (EGX88_00585) | 79984..80193 | + | 210 | Protein_104 | peptidoglycan-binding protein | - |
| EGX88_RS00590 (EGX88_00590) | 80293..80478 | - | 186 | Protein_105 | IS21 family transposase IS100 | Transposase |
| EGX88_RS00595 (EGX88_00595) | 80667..82050 | - | 1384 | Protein_106 | IS66 family transposase ISSfl3 | Transposase |
| EGX88_RS00600 (EGX88_00600) | 82047..82397 | - | 351 | WP_005061851.1 | IS66 family transposase ISSfl3 | Transposase |
| EGX88_RS00605 (EGX88_00605) | 82394..83068 | - | 675 | WP_004967157.1 | IS66 family transposase ISSfl3 | Transposase |
| EGX88_RS00610 (EGX88_00610) | 83148..84186 | - | 1039 | Protein_109 | IS3 family transposase IS2 | Transposase |
| EGX88_RS00615 (EGX88_00615) | 84274..84543 | - | 270 | Protein_110 | IS3 family transposase ISEc48 | Transposase |
| EGX88_RS25540 | 84658..85296 | - | 639 | WP_000607008.1 | hypothetical protein | VF |
| EGX88_RS00625 (EGX88_00625) | 85455..85925 | - | 471 | Protein_112 | IS1 family transposase IS1N | Transposase |
| EGX88_RS00635 (EGX88_00635) | 86124..86798 | + | 675 | WP_004967157.1 | IS66 family transposase ISSfl3 | Transposase |
| EGX88_RS00640 (EGX88_00640) | 86795..87145 | + | 351 | WP_005048975.1 | IS66 family transposase ISSfl3 | Transposase |
| EGX88_RS00645 (EGX88_00645) | 87142..87693 | + | 552 | Protein_115 | IS66 family transposase ISSfl3 | Transposase |
| EGX88_RS00650 (EGX88_00650) | 87751..88907 | + | 1157 | WP_252997053.1 | IS3 family transposase IS600 | Transposase |
| EGX88_RS00660 (EGX88_00660) | 88951..89880 | + | 930 | Protein_117 | IS66 family transposase ISSfl3 | Transposase |
| EGX88_RS00665 (EGX88_00665) | 89889..90608 | + | 720 | Protein_118 | IS110 family transposase ISSfl8 | Transposase |
| EGX88_RS00675 (EGX88_00675) | 90947..91717 | - | 771 | WP_001006196.1 | hypothetical protein | - |
| EGX88_RS00680 (EGX88_00680) | 91762..92248 | - | 487 | Protein_120 | DUF1380 domain-containing protein | - |
| EGX88_RS00685 (EGX88_00685) | 92208..92429 | - | 222 | WP_001104887.1 | hypothetical protein | - |
| EGX88_RS00690 (EGX88_00690) | 92430..93113 | - | 684 | WP_000086135.1 | DNA methylase | - |
| EGX88_RS00695 (EGX88_00695) | 93177..93488 | - | 312 | WP_031942478.1 | hypothetical protein | - |
| EGX88_RS00700 (EGX88_00700) | 93485..94387 | - | 903 | WP_128567749.1 | DUF1281 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|