MGE detailed information
MGE type: IScluster/Tn MGE length: 41304 bp
Accession: NZ_CP034059 Location: 154923..196226 Organism: Shigella flexneri strain FDAARGOS_535 Replicon: plasmid unnamed1
Accession: NZ_CP034059 Location: 154923..196226 Organism: Shigella flexneri strain FDAARGOS_535 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EGX88_RS01060 (EGX88_01060) | 150462..150698 | + | 237 | WP_000588813.1 | phosphopantetheine-binding protein | - |
| EGX88_RS01065 (EGX88_01065) | 150915..151844 | + | 930 | WP_000227976.1 | virulence regulon transcriptional activator VirB | - |
| EGX88_RS01070 (EGX88_01070) | 152791..153570 | - | 780 | WP_005059304.1 | type III secretion system effector cysteine protease IpaJ | - |
| EGX88_RS25900 | 153760..154576 | - | 817 | Protein_193 | IS110 family transposase | - |
| EGX88_RS01075 (EGX88_01080) | 154923..155927 | + | 1005 | WP_000255980.1 | IS21 family transposase IS100kyp | Transposase |
| EGX88_RS01080 (EGX88_01085) | 156119..157315 | + | 1197 | WP_134797091.1 | IS110 family transposase ISSfl4 | Transposase |
| EGX88_RS01085 (EGX88_01090) | 157365..158202 | - | 838 | Protein_196 | IS21 family transposase ISEc62 | Transposase |
| EGX88_RS25905 | 158185..158526 | - | 342 | Protein_197 | IS21 family transposase ISEc62 | Transposase |
| EGX88_RS01090 (EGX88_01095) | 158641..159444 | - | 804 | Protein_198 | IS3 family transposase ISKpn38 | Transposase |
| EGX88_RS01095 (EGX88_01100) | 159485..160549 | - | 1065 | Protein_199 | IS3 family transposase IS600 | Transposase |
| EGX88_RS01105 (EGX88_01110) | 160887..162341 | - | 1455 | WP_094169927.1 | hypothetical protein | VF |
| EGX88_RS01110 (EGX88_01115) | 162913..163587 | + | 675 | WP_001088287.1 | IS66 family transposase ISSfl3 | Transposase |
| EGX88_RS01115 (EGX88_01120) | 163584..163934 | + | 351 | WP_005048975.1 | IS66 family transposase ISSfl3 | Transposase |
| EGX88_RS01120 (EGX88_01125) | 163931..165532 | + | 1602 | WP_005063916.1 | IS66 family transposase ISSfl3 | Transposase |
| EGX88_RS25555 | 165786..165950 | - | 165 | WP_001346193.1 | hypothetical protein | - |
| EGX88_RS01145 (EGX88_01150) | 166852..167136 | + | 285 | WP_011114751.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| EGX88_RS01150 (EGX88_01155) | 167124..167609 | + | 486 | WP_000501974.1 | GNAT family N-acetyltransferase | Toxin Detail |
| EGX88_RS01155 (EGX88_01160) | 167782..168063 | - | 282 | Protein_207 | IS4 family transposase ISSfl1 | Transposase |
| EGX88_RS01160 (EGX88_01165) | 168130..169286 | + | 1157 | WP_134796931.1 | IS3 family transposase IS600 | Transposase |
| EGX88_RS01165 (EGX88_01170) | 169400..170628 | + | 1229 | WP_094081542.1 | IS3 family transposase IS2 | Transposase |
| EGX88_RS01170 (EGX88_01175) | 170666..170809 | + | 144 | Protein_210 | DUF3440 domain-containing protein | - |
| EGX88_RS01175 (EGX88_01180) | 170794..171432 | + | 639 | WP_000502862.1 | ParB N-terminal domain-containing protein | - |
| EGX88_RS01180 | 171660..172084 | + | 425 | Protein_212 | hypothetical protein | - |
| EGX88_RS01185 (EGX88_01185) | 172079..173275 | - | 1197 | WP_005063228.1 | IS110 family transposase ISSfl4 | Transposase |
| EGX88_RS01190 (EGX88_01190) | 173526..173999 | + | 474 | WP_005038443.1 | AraC family transcriptional regulator | - |
| EGX88_RS01195 (EGX88_01195) | 174088..174953 | + | 866 | WP_086020993.1 | IS5 family transposase ISSfl7 | Transposase |
| EGX88_RS01200 (EGX88_01200) | 175203..175396 | + | 194 | Protein_216 | HNH endonuclease | - |
| EGX88_RS01205 (EGX88_01205) | 175539..175760 | + | 222 | Protein_217 | IS66 family transposase ISCro1 | Transposase |
| EGX88_RS01210 (EGX88_01210) | 175781..175843 | - | 63 | Protein_218 | IS66 family transposase ISCro1 | Transposase |
| EGX88_RS01215 (EGX88_01215) | 176293..177705 | + | 1413 | WP_010921643.1 | hypothetical protein | VF |
| EGX88_RS01220 (EGX88_01220) | 177809..177958 | - | 150 | Protein_220 | IS1 family transposase | - |
| EGX88_RS01225 (EGX88_01225) | 178034..179731 | + | 1698 | WP_010921642.1 | hypothetical protein | VF |
| EGX88_RS01235 (EGX88_01230) | 179848..179967 | + | 120 | Protein_222 | IS66 family transposase ISCro1 | Transposase |
| EGX88_RS01245 (EGX88_01240) | 180134..180406 | + | 273 | WP_000019158.1 | hypothetical protein | - |
| EGX88_RS01250 (EGX88_01245) | 180387..181594 | + | 1208 | WP_094096874.1 | IS91 family transposase ISSbo1 | Transposase |
| EGX88_RS01255 (EGX88_01250) | 181970..182686 | - | 717 | Protein_225 | IS21 family transposase IS100kyp | Transposase |
| EGX88_RS01265 (EGX88_01260) | 182884..184092 | + | 1209 | Protein_226 | IS3 family transposase | - |
| EGX88_RS01275 (EGX88_01270) | 184195..184692 | + | 498 | Protein_227 | IS66 family transposase ISEc47 | Transposase |
| EGX88_RS01280 (EGX88_01275) | 184733..184924 | + | 192 | Protein_228 | IS21 family transposase IS100 | Transposase |
| EGX88_RS01285 (EGX88_01280) | 185018..185227 | - | 210 | Protein_229 | peptidoglycan-binding protein | - |
| EGX88_RS01290 (EGX88_01285) | 185277..186641 | - | 1365 | WP_000051932.1 | MFS transporter | - |
| EGX88_RS01295 (EGX88_01290) | 186839..187114 | - | 276 | WP_228355688.1 | S-type pyocin domain-containing protein | - |
| EGX88_RS25560 | 187389..187601 | + | 213 | Protein_232 | DDE-type integrase/transposase/recombinase | - |
| EGX88_RS01305 (EGX88_01300) | 187645..188853 | - | 1209 | Protein_233 | IS3 family transposase | - |
| EGX88_RS01310 (EGX88_01305) | 188905..190629 | - | 1725 | WP_010921638.1 | putative E3 ubiquitin-protein ligase ipaH4.5 | VF |
| EGX88_RS01315 (EGX88_01310) | 191057..192754 | - | 1698 | WP_010921637.1 | putative E3 ubiquitin-protein ligase ipaH7.8 | VF |
| EGX88_RS01320 (EGX88_01315) | 193083..193262 | + | 180 | Protein_236 | transposase | - |
| EGX88_RS01330 (EGX88_01325) | 194164..195195 | - | 1032 | WP_004998488.1 | IS630 family transposase IS630 | Transposase |
| EGX88_RS25440 | 195310..195438 | - | 129 | Protein_239 | IS5 family transposase ISSfl7 | Transposase |
| EGX88_RS01345 (EGX88_01340) | 196818..197006 | - | 189 | WP_000957853.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|