MGE detailed information
MGE type: Prophage MGE length: 34402 bp
Accession: NZ_CP034002 Location: 1885771..1920172 Organism: Staphylococcus aureus strain P1D8C1 Replicon: chromosome
Accession: NZ_CP034002 Location: 1885771..1920172 Organism: Staphylococcus aureus strain P1D8C1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EFD71_RS09045 () | 1881584..1882330 | - | 747 | WP_001822900.1 | S9 family peptidase | - |
| EFD71_RS09050 () | 1882335..1882808 | - | 474 | WP_156668031.1 | nucleoside triphosphatase YtkD | - |
| EFD71_RS09055 () | 1882874..1883131 | + | 258 | WP_000718107.1 | membrane protein insertion efficiency factor YidD | - |
| EFD71_RS09060 () | 1883128..1884129 | - | 1002 | WP_000778528.1 | o-succinylbenzoate synthase | - |
| EFD71_RS09065 () | 1884134..1885612 | - | 1479 | WP_000348364.1 | o-succinylbenzoate--CoA ligase | - |
| EFD71_RS09070 () | 1885771..1886226 | - | 456 | WP_012840523.1 | DUF4909 domain-containing protein | - |
| EFD71_RS09075 () | 1886529..1887179 | + | 651 | WP_001795210.1 | excalibur calcium-binding domain-containing protein | - |
| EFD71_RS09080 () | 1887260..1888255 | + | 996 | WP_000070642.1 | DUF4352 domain-containing protein | - |
| EFD71_RS09085 () | 1888330..1888956 | + | 627 | WP_000669024.1 | hypothetical protein | - |
| EFD71_RS09090 () | 1888997..1889338 | + | 342 | WP_000627540.1 | DUF3969 family protein | - |
| EFD71_RS09095 () | 1889439..1890011 | + | 573 | WP_000414216.1 | hypothetical protein | - |
| EFD71_RS09100 () | 1890209..1891221 | - | 1013 | Protein_1774 | IS3 family transposase ISClsp1 | Transposase |
| EFD71_RS09105 () | 1891366..1891461 | + | 96 | WP_001801861.1 | type I toxin-antitoxin system Fst family toxin PepA1 | Toxin Detail |
| - () | 1891489..1891546 | - | 58 | - | - | Antitoxin Detail |
| EFD71_RS09110 () | 1891584..1891685 | + | 102 | WP_001792025.1 | hypothetical protein | - |
| EFD71_RS09115 () | 1891663..1891824 | - | 162 | Protein_1777 | transposase | - |
| EFD71_RS09120 () | 1891815..1892309 | - | 495 | Protein_1778 | IS21 family transposase IS232 | Transposase |
| EFD71_RS09125 () | 1892761..1893990 | - | 1230 | WP_000072627.1 | restriction endonuclease subunit S | - |
| EFD71_RS09130 () | 1893983..1895539 | - | 1557 | WP_064135920.1 | type I restriction-modification system subunit M | - |
| EFD71_RS09135 () | 1895703..1895837 | - | 135 | WP_001791797.1 | hypothetical protein | - |
| EFD71_RS09140 () | 1895900..1896619 | - | 720 | WP_001038702.1 | hypothetical protein | VF |
| EFD71_RS09145 () | 1896740..1897459 | - | 720 | WP_001038872.1 | hypothetical protein | VF |
| EFD71_RS09150 () | 1897517..1898239 | - | 723 | WP_001039454.1 | hypothetical protein | VF |
| EFD71_RS09155 () | 1898364..1899071 | - | 708 | WP_001039427.1 | hypothetical protein | VF |
| EFD71_RS09160 () | 1900035..1900616 | + | 582 | WP_001092780.1 | DUF4888 domain-containing protein | - |
| EFD71_RS09165 () | 1901089..1901377 | - | 289 | Protein_1787 | BsaG protein | - |
| EFD71_RS09170 () | 1901563..1902036 | + | 474 | WP_000550252.1 | hypothetical protein | - |
| EFD71_RS09175 () | 1902041..1902832 | + | 792 | WP_000543854.1 | DUF1828 domain-containing protein | - |
| EFD71_RS09180 () | 1903202..1904185 | - | 984 | WP_000782463.1 | hypothetical protein | VF |
| EFD71_RS09185 () | 1904187..1905122 | - | 936 | WP_156668032.1 | hypothetical protein | VF |
| EFD71_RS14040 () | 1906018..1906449 | + | 432 | Protein_1792 | hypothetical protein | - |
| EFD71_RS09190 () | 1906486..1907274 | + | 789 | WP_000206343.1 | DUF1828 domain-containing protein | - |
| EFD71_RS09195 () | 1908108..1908602 | + | 495 | WP_001253432.1 | hypothetical protein | - |
| EFD71_RS09200 () | 1908680..1908916 | + | 237 | WP_000617704.1 | hypothetical protein | - |
| EFD71_RS09205 () | 1908937..1909713 | + | 777 | WP_000848318.1 | DUF1828 domain-containing protein | - |
| EFD71_RS09210 () | 1910265..1911041 | - | 777 | WP_000736712.1 | hypothetical protein | VF |
| EFD71_RS09215 () | 1911324..1912079 | - | 756 | WP_001236362.1 | hypothetical protein | VF |
| EFD71_RS09220 () | 1912118..1912889 | - | 772 | Protein_1799 | hypothetical protein | VF |
| EFD71_RS09225 () | 1913043..1913771 | - | 729 | WP_000713847.1 | hypothetical protein | VF |
| EFD71_RS09230 () | 1913806..1914525 | - | 720 | WP_000821658.1 | hypothetical protein | VF |
| EFD71_RS09235 () | 1914806..1915588 | - | 783 | WP_010922839.1 | hypothetical protein | VF |
| EFD71_RS09280 () | 1916948..1917502 | - | 555 | WP_000132890.1 | alpha/beta hydrolase | - |
| EFD71_RS09285 () | 1917825..1919225 | - | 1401 | WP_000167542.1 | protoporphyrinogen oxidase | - |
| EFD71_RS09290 () | 1919249..1920172 | - | 924 | WP_000162881.1 | ferrochelatase | - |
| EFD71_RS09295 () | 1920230..1921267 | - | 1038 | WP_000233526.1 | uroporphyrinogen decarboxylase | - |
| EFD71_RS09300 () | 1921257..1921367 | - | 111 | WP_001790154.1 | hypothetical protein | - |
| EFD71_RS09305 () | 1921530..1922033 | + | 504 | WP_000737976.1 | signal transduction protein TRAP | - |
| EFD71_RS09310 () | 1922157..1923380 | - | 1224 | WP_000551836.1 | ABC transporter permease | - |
| EFD71_RS09315 () | 1923373..1924113 | - | 741 | WP_000216874.1 | ABC transporter ATP-binding protein | - |
| EFD71_RS09320 () | 1924247..1924669 | + | 423 | WP_000004981.1 | HIT family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Staphylococcus aureus subsp. aureus N315 | Prophage | TA20384 | NC_002745 | 1850940..1883547 | 0.003 |