MGE detailed information
MGE type: Prophage MGE length: 71075 bp
Accession: NZ_CP034002 Location: 1508987..1580061 Organism: Staphylococcus aureus strain P1D8C1 Replicon: chromosome
Accession: NZ_CP034002 Location: 1508987..1580061 Organism: Staphylococcus aureus strain P1D8C1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EFD71_RS07095 () | 1505325..1505516 | - | 192 | WP_001800578.1 | hypothetical protein | - |
| EFD71_RS07100 () | 1505597..1505749 | - | 153 | WP_001795818.1 | hypothetical protein | - |
| EFD71_RS07105 () | 1505780..1506439 | - | 660 | WP_000644391.1 | (d)CMP kinase | - |
| EFD71_RS07110 () | 1506516..1507484 | + | 969 | WP_000681757.1 | asparaginase | - |
| EFD71_RS07115 () | 1507599..1508585 | - | 987 | WP_001174258.1 | YpdA family putative bacillithiol disulfide reductase | - |
| EFD71_RS07120 () | 1508746..1508862 | - | 117 | WP_001792205.1 | hypothetical protein | - |
| EFD71_RS07125 () | 1508987..1510447 | - | 1461 | WP_156668015.1 | hypothetical protein | VF |
| EFD71_RS07130 () | 1510600..1511979 | - | 1380 | WP_000902099.1 | ATP-dependent DNA helicase | - |
| EFD71_RS07135 () | 1511969..1512922 | - | 954 | WP_031774347.1 | helix-turn-helix domain-containing protein | - |
| EFD71_RS07140 () | 1513030..1513278 | + | 249 | WP_001151997.1 | ferredoxin | - |
| EFD71_RS07145 () | 1513384..1513929 | - | 546 | WP_001186912.1 | ECF transporter S component | - |
| EFD71_RS07150 () | 1514331..1515287 | - | 957 | WP_000913227.1 | DUF1672 domain-containing protein | - |
| EFD71_RS14030 () | 1515341..1515746 | - | 406 | Protein_1386 | hypothetical protein | - |
| EFD71_RS07160 () | 1515758..1516654 | - | 897 | WP_000476354.1 | DUF1672 domain-containing protein | - |
| EFD71_RS07165 () | 1516712..1517617 | - | 906 | WP_000476865.1 | DUF1672 domain-containing protein | - |
| EFD71_RS07170 () | 1517707..1517922 | - | 216 | WP_000209712.1 | hypothetical protein | - |
| EFD71_RS07175 () | 1518645..1520099 | - | 1455 | WP_000909205.1 | N-acetylmuramoyl-L-alanine amidase | - |
| EFD71_RS07180 () | 1520110..1520412 | - | 303 | WP_000339141.1 | phage holin | - |
| EFD71_RS07185 () | 1520548..1520847 | - | 300 | WP_000466784.1 | DUF2951 domain-containing protein | - |
| EFD71_RS07190 () | 1520893..1521057 | - | 165 | WP_000916020.1 | XkdX family protein | - |
| EFD71_RS07195 () | 1521050..1521439 | - | 390 | WP_001166599.1 | DUF2977 domain-containing protein | - |
| EFD71_RS07200 () | 1521439..1522905 | - | 1467 | WP_000067132.1 | BppU family phage baseplate upper protein | - |
| EFD71_RS07205 () | 1522905..1524815 | - | 1911 | WP_000429551.1 | minor structural protein | - |
| EFD71_RS07210 () | 1524831..1525121 | - | 291 | WP_000179864.1 | hypothetical protein | - |
| EFD71_RS07215 () | 1525121..1526704 | - | 1584 | WP_000384474.1 | prophage endopeptidase tail family protein | - |
| EFD71_RS07220 () | 1526713..1527537 | - | 825 | WP_001190533.1 | phage tail family protein | - |
| EFD71_RS07225 () | 1527537..1533737 | - | 6201 | WP_001003458.1 | phage tail tape measure protein | - |
| EFD71_RS07230 () | 1533751..1533909 | - | 159 | WP_000438833.1 | hypothetical protein | - |
| EFD71_RS07235 () | 1533951..1534301 | - | 351 | WP_000589165.1 | hypothetical protein | - |
| EFD71_RS07240 () | 1534359..1534814 | - | 456 | WP_000169128.1 | Ig domain-containing protein | - |
| EFD71_RS07245 () | 1534906..1535547 | - | 642 | WP_000807536.1 | tail protein | - |
| EFD71_RS07250 () | 1535582..1535977 | - | 396 | WP_001023802.1 | DUF3168 domain-containing protein | - |
| EFD71_RS07255 () | 1535978..1536379 | - | 402 | WP_000110020.1 | hypothetical protein | - |
| EFD71_RS07260 () | 1536376..1536708 | - | 333 | WP_000395501.1 | hypothetical protein | - |
| EFD71_RS07265 () | 1536720..1536998 | - | 279 | WP_000050973.1 | head-tail connector protein | - |
| EFD71_RS07270 () | 1537067..1538230 | - | 1164 | WP_001142739.1 | phage major capsid protein | - |
| EFD71_RS07275 () | 1538242..1539015 | - | 774 | WP_000061872.1 | Clp protease ClpP | - |
| EFD71_RS07280 () | 1538999..1540237 | - | 1239 | WP_001100660.1 | phage portal protein | - |
| EFD71_RS07285 () | 1540242..1541933 | - | 1692 | WP_000152858.1 | terminase large subunit | - |
| EFD71_RS07290 () | 1541923..1542228 | - | 306 | WP_000778935.1 | P27 family phage terminase small subunit | - |
| EFD71_RS07295 () | 1542353..1542673 | - | 321 | WP_000166884.1 | HNH endonuclease | - |
| EFD71_RS07300 () | 1542830..1543267 | - | 438 | WP_000513704.1 | transcriptional regulator | - |
| EFD71_RS07305 () | 1543280..1544647 | - | 1368 | WP_078069123.1 | DEAD/DEAH box helicase | - |
| EFD71_RS07310 () | 1544628..1544918 | - | 291 | WP_000665205.1 | VRR-NUC domain-containing protein | - |
| EFD71_RS07315 () | 1545052..1545156 | + | 105 | WP_015978074.1 | hypothetical protein | - |
| EFD71_RS07320 () | 1545259..1547706 | - | 2448 | WP_156668016.1 | virulence-associated E family protein | - |
| EFD71_RS07325 () | 1547759..1547959 | - | 201 | WP_000265258.1 | DUF1514 family protein | - |
| EFD71_RS07330 () | 1548027..1548179 | - | 153 | WP_000595269.1 | transcriptional activator RinB | - |
| EFD71_RS07335 () | 1548176..1548565 | - | 390 | WP_001596346.1 | hypothetical protein | - |
| EFD71_RS07340 () | 1548555..1548791 | - | 237 | WP_000608283.1 | hypothetical protein | - |
| EFD71_RS07345 () | 1548784..1548987 | - | 204 | WP_000141259.1 | hypothetical protein | - |
| EFD71_RS07350 () | 1548984..1549190 | - | 207 | WP_000195832.1 | DUF1381 domain-containing protein | - |
| EFD71_RS07355 () | 1549227..1549763 | - | 537 | WP_156668017.1 | dUTPase | - |
| EFD71_RS07360 () | 1549756..1549926 | - | 171 | WP_000714407.1 | hypothetical protein | - |
| EFD71_RS07365 () | 1549913..1550167 | - | 255 | WP_001065040.1 | DUF1024 family protein | - |
| EFD71_RS07370 () | 1550182..1550424 | - | 243 | WP_000132194.1 | hypothetical protein | - |
| EFD71_RS07375 () | 1550439..1550639 | - | 201 | WP_000235324.1 | hypothetical protein | - |
| EFD71_RS07380 () | 1550642..1550899 | - | 258 | WP_000022728.1 | DUF3310 domain-containing protein | - |
| EFD71_RS07385 () | 1550899..1551300 | - | 402 | WP_000113974.1 | PVL family protein | - |
| EFD71_RS07390 () | 1551300..1551485 | - | 186 | WP_001164629.1 | DUF3113 family protein | - |
| EFD71_RS07395 () | 1551498..1553450 | - | 1953 | WP_156668018.1 | DNA polymerase | - |
| EFD71_RS07400 () | 1553519..1554076 | - | 558 | WP_000645042.1 | DUF2815 family protein | - |
| EFD71_RS07405 () | 1554103..1555269 | - | 1167 | WP_000762527.1 | DUF2800 domain-containing protein | - |
| EFD71_RS07410 () | 1555266..1555628 | - | 363 | WP_000985972.1 | hypothetical protein | - |
| EFD71_RS07415 () | 1555643..1555966 | - | 324 | WP_000174998.1 | hypothetical protein | - |
| EFD71_RS07420 () | 1556045..1556206 | - | 162 | WP_001285954.1 | DUF1270 domain-containing protein | - |
| EFD71_RS07425 () | 1556219..1556482 | - | 264 | WP_001124160.1 | IS3 family transposase ISVa4 | Transposase |
| EFD71_RS07430 () | 1556507..1556722 | - | 216 | WP_001097552.1 | hypothetical protein | - |
| EFD71_RS07435 () | 1556777..1557142 | + | 366 | WP_001128433.1 | hypothetical protein | Antitoxin Detail |
| EFD71_RS07440 () | 1557111..1557356 | - | 246 | WP_001025401.1 | DUF2829 domain-containing protein | Toxin Detail |
| EFD71_RS07445 () | 1557423..1557803 | + | 381 | WP_000773059.1 | DUF2513 domain-containing protein | - |
| EFD71_RS07450 () | 1557790..1557987 | - | 198 | WP_001148860.1 | hypothetical protein | - |
| EFD71_RS07455 () | 1558057..1558269 | + | 213 | WP_000362644.1 | hypothetical protein | - |
| EFD71_RS14035 () | 1558310..1558459 | - | 150 | WP_000771849.1 | hypothetical protein | - |
| EFD71_RS07460 () | 1558474..1558917 | - | 444 | WP_000435357.1 | hypothetical protein | - |
| EFD71_RS07465 () | 1558965..1559177 | - | 213 | WP_000213811.1 | helix-turn-helix transcriptional regulator | - |
| EFD71_RS07470 () | 1559329..1560060 | + | 732 | WP_000511090.1 | XRE family transcriptional regulator | - |
| EFD71_RS07475 () | 1560130..1560312 | + | 183 | WP_000705240.1 | hypothetical protein | - |
| EFD71_RS07480 () | 1560348..1560494 | + | 147 | WP_001795334.1 | hypothetical protein | - |
| EFD71_RS07485 () | 1560491..1561105 | - | 615 | WP_000191466.1 | hypothetical protein | - |
| EFD71_RS07490 () | 1561231..1562436 | + | 1206 | WP_000264750.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| EFD71_RS07495 () | 1562479..1564506 | - | 2028 | WP_001795335.1 | hypothetical protein | - |
| EFD71_RS07500 () | 1564499..1565425 | - | 927 | WP_001557355.1 | DUF1672 domain-containing protein | - |
| EFD71_RS07505 () | 1565669..1567420 | - | 1752 | WP_000987774.1 | two-component system sensor histidine kinase SrrB | - |
| EFD71_RS07510 () | 1567401..1568126 | - | 726 | WP_000064078.1 | Regulator of RpoS | VF |
| EFD71_RS07515 () | 1568259..1568996 | - | 738 | WP_000159577.1 | rRNA pseudouridine synthase | - |
| EFD71_RS07520 () | 1568989..1569531 | - | 543 | WP_156668019.1 | SMC-Scp complex subunit ScpB | - |
| EFD71_RS07525 () | 1569524..1570255 | - | 732 | WP_000273371.1 | segregation/condensation protein A | - |
| EFD71_RS07530 () | 1570347..1570853 | + | 507 | WP_001183429.1 | DUF309 domain-containing protein | - |
| EFD71_RS07535 () | 1570931..1571818 | - | 888 | WP_000447733.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| EFD71_RS07540 () | 1571867..1572316 | - | 450 | WP_000392691.1 | transcriptional repressor | - |
| EFD71_RS07545 () | 1572421..1572963 | - | 543 | WP_000365240.1 | NUDIX hydrolase | - |
| EFD71_RS07550 () | 1573045..1573953 | + | 909 | WP_001171335.1 | aldo/keto reductase | - |
| EFD71_RS07555 () | 1574169..1574417 | - | 249 | WP_000995800.1 | hypothetical protein | - |
| EFD71_RS07560 () | 1574433..1575188 | - | 756 | WP_000678232.1 | SDR family oxidoreductase | - |
| EFD71_RS07565 () | 1575330..1576145 | + | 816 | WP_156668020.1 | pyrroline-5-carboxylate reductase | - |
| EFD71_RS07570 () | 1576248..1577168 | - | 921 | WP_000454063.1 | ribonuclease Z | - |
| EFD71_RS07575 () | 1577481..1578965 | + | 1485 | WP_000105070.1 | glucose-6-phosphate dehydrogenase | - |
| EFD71_RS07580 () | 1579195..1580061 | + | 867 | WP_000382585.1 | AraC family transcriptional regulator | - |
| EFD71_RS07585 () | 1580143..1581792 | - | 1650 | WP_001041912.1 | alpha-glucosidase | - |
| EFD71_RS07590 () | 1581808..1582827 | - | 1020 | WP_156668021.1 | LacI family DNA-binding transcriptional regulator | - |
| EFD71_RS07595 () | 1582828..1583082 | - | 255 | WP_001792107.1 | hypothetical protein | - |
| EFD71_RS07600 () | 1583021..1583392 | - | 372 | WP_000413436.1 | VOC family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|