MGE detailed information
MGE type: Prophage MGE length: 38899 bp
Accession: NZ_CP033999 Location: 1885777..1924675 Organism: Staphylococcus aureus strain P1D8C2 Replicon: chromosome
Accession: NZ_CP033999 Location: 1885777..1924675 Organism: Staphylococcus aureus strain P1D8C2 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EFD72_RS09045 () | 1881590..1882336 | - | 747 | WP_001822900.1 | S9 family peptidase | - |
| EFD72_RS09050 () | 1882341..1882814 | - | 474 | WP_156668031.1 | nucleoside triphosphatase YtkD | - |
| EFD72_RS09055 () | 1882880..1883137 | + | 258 | WP_000718107.1 | membrane protein insertion efficiency factor YidD | - |
| EFD72_RS09060 () | 1883134..1884135 | - | 1002 | WP_000778528.1 | o-succinylbenzoate synthase | - |
| EFD72_RS09065 () | 1884140..1885618 | - | 1479 | WP_000348364.1 | o-succinylbenzoate--CoA ligase | - |
| EFD72_RS09070 () | 1885777..1886232 | - | 456 | WP_012840523.1 | DUF4909 domain-containing protein | - |
| EFD72_RS09075 () | 1886535..1887185 | + | 651 | WP_001795210.1 | excalibur calcium-binding domain-containing protein | - |
| EFD72_RS09080 () | 1887266..1888261 | + | 996 | WP_000070642.1 | DUF4352 domain-containing protein | - |
| EFD72_RS09085 () | 1888336..1888962 | + | 627 | WP_000669024.1 | hypothetical protein | - |
| EFD72_RS09090 () | 1889003..1889344 | + | 342 | WP_000627540.1 | DUF3969 family protein | - |
| EFD72_RS09095 () | 1889445..1890017 | + | 573 | WP_000414216.1 | hypothetical protein | - |
| EFD72_RS09100 () | 1890215..1891227 | - | 1013 | Protein_1774 | IS3 family transposase ISClsp1 | Transposase |
| EFD72_RS09105 () | 1891372..1891467 | + | 96 | WP_001801861.1 | type I toxin-antitoxin system Fst family toxin PepA1 | Toxin Detail |
| - () | 1891495..1891552 | - | 58 | - | - | Antitoxin Detail |
| EFD72_RS09110 () | 1891590..1891691 | + | 102 | WP_001792025.1 | hypothetical protein | - |
| EFD72_RS09115 () | 1891669..1891830 | - | 162 | Protein_1777 | transposase | - |
| EFD72_RS09120 () | 1891821..1892315 | - | 495 | Protein_1778 | IS21 family transposase IS232 | Transposase |
| EFD72_RS09125 () | 1892767..1893996 | - | 1230 | WP_000072627.1 | restriction endonuclease subunit S | - |
| EFD72_RS09130 () | 1893989..1895545 | - | 1557 | WP_064135920.1 | type I restriction-modification system subunit M | - |
| EFD72_RS09135 () | 1895709..1895843 | - | 135 | WP_001791797.1 | hypothetical protein | - |
| EFD72_RS09140 () | 1895906..1896625 | - | 720 | WP_001038702.1 | hypothetical protein | VF |
| EFD72_RS09145 () | 1896746..1897465 | - | 720 | WP_001038872.1 | hypothetical protein | VF |
| EFD72_RS09150 () | 1897523..1898245 | - | 723 | WP_001039454.1 | hypothetical protein | VF |
| EFD72_RS09155 () | 1898370..1899077 | - | 708 | WP_001039427.1 | hypothetical protein | VF |
| EFD72_RS09160 () | 1900041..1900622 | + | 582 | WP_001092780.1 | DUF4888 domain-containing protein | - |
| EFD72_RS09165 () | 1901095..1901383 | - | 289 | Protein_1787 | BsaG protein | - |
| EFD72_RS09170 () | 1901569..1902042 | + | 474 | WP_000550252.1 | hypothetical protein | - |
| EFD72_RS09175 () | 1902047..1902838 | + | 792 | WP_000543854.1 | DUF1828 domain-containing protein | - |
| EFD72_RS09180 () | 1903208..1904191 | - | 984 | WP_000782463.1 | hypothetical protein | VF |
| EFD72_RS09185 () | 1904193..1905128 | - | 936 | WP_156668032.1 | hypothetical protein | VF |
| EFD72_RS14040 () | 1906024..1906455 | + | 432 | Protein_1792 | hypothetical protein | - |
| EFD72_RS09190 () | 1906492..1907280 | + | 789 | WP_000206343.1 | DUF1828 domain-containing protein | - |
| EFD72_RS09195 () | 1908114..1908608 | + | 495 | WP_001253432.1 | hypothetical protein | - |
| EFD72_RS09200 () | 1908686..1908922 | + | 237 | WP_000617704.1 | hypothetical protein | - |
| EFD72_RS09205 () | 1908943..1909719 | + | 777 | WP_000848318.1 | DUF1828 domain-containing protein | - |
| EFD72_RS09210 () | 1910271..1911047 | - | 777 | WP_000736712.1 | hypothetical protein | VF |
| EFD72_RS09215 () | 1911330..1912085 | - | 756 | WP_001236362.1 | Small, acid-soluble spore protein I | VF |
| EFD72_RS09220 () | 1912124..1912895 | - | 772 | Protein_1799 | Putative TrmH family tRNA/rRNA methyltransferase | VF |
| EFD72_RS09225 () | 1913049..1913777 | - | 729 | WP_000713847.1 | Phenylalanine--tRNA ligase beta subunit | VF |
| EFD72_RS09230 () | 1913812..1914531 | - | 720 | WP_000821658.1 | Asparagine--tRNA ligase | VF |
| EFD72_RS09235 () | 1914812..1915594 | - | 783 | WP_010922839.1 | hypothetical protein | VF |
| EFD72_RS09280 () | 1916954..1917508 | - | 555 | WP_000132890.1 | alpha/beta hydrolase | - |
| EFD72_RS09285 () | 1917831..1919231 | - | 1401 | WP_000167542.1 | protoporphyrinogen oxidase | - |
| EFD72_RS09290 () | 1919255..1920178 | - | 924 | WP_000162881.1 | ferrochelatase | - |
| EFD72_RS09295 () | 1920236..1921273 | - | 1038 | WP_000233526.1 | uroporphyrinogen decarboxylase | - |
| EFD72_RS09300 () | 1921263..1921373 | - | 111 | WP_001790154.1 | hypothetical protein | - |
| EFD72_RS09305 () | 1921536..1922039 | + | 504 | WP_000737976.1 | signal transduction protein TRAP | - |
| EFD72_RS09310 () | 1922163..1923386 | - | 1224 | WP_000551836.1 | ABC transporter permease | - |
| EFD72_RS09315 () | 1923379..1924119 | - | 741 | WP_000216874.1 | Endonuclease MutS2 | VF |
| EFD72_RS09320 () | 1924253..1924675 | + | 423 | WP_000004981.1 | HIT family protein | - |
| EFD72_RS09325 () | 1924817..1925182 | + | 366 | WP_000648118.1 | YtxH domain-containing protein | - |
| EFD72_RS09330 () | 1925917..1926474 | + | 558 | WP_000477959.1 | DUF3267 domain-containing protein | - |
| EFD72_RS09335 () | 1926679..1927641 | + | 963 | WP_000782121.1 | foldase | - |
| EFD72_RS09340 () | 1927762..1928703 | - | 942 | WP_001244175.1 | 3'-5' exoribonuclease YhaM | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Staphylococcus aureus subsp. aureus N315 | Prophage | TA20384 | NC_002745 | 1850940..1883547 | 0.006 |