MGE detailed information
MGE type: Prophage MGE length: 59563 bp
Accession: NZ_CP033884 Location: 4744129..4803691 Organism: Escherichia coli strain 50579417 Replicon: chromosome
Accession: NZ_CP033884 Location: 4744129..4803691 Organism: Escherichia coli strain 50579417 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EGM66_RS25425 () | 4739445..4740272 | + | 828 | WP_000983718.1 | iron/manganese ABC transporter ATP-binding protein SitB | - |
| EGM66_RS25430 () | 4740269..4741126 | + | 858 | WP_001101728.1 | iron/manganese ABC transporter permease subunit SitC | - |
| EGM66_RS25435 () | 4741123..4741980 | + | 858 | WP_000968125.1 | iron/manganese ABC transporter permease subunit SitD | - |
| EGM66_RS25440 () | 4742453..4743247 | + | 795 | WP_000354607.1 | hypothetical protein | - |
| EGM66_RS25445 () | 4743372..4743523 | + | 152 | Protein_4415 | DinI-like family protein | - |
| EGM66_RS25450 () | 4743793..4744086 | - | 294 | WP_001405873.1 | hypothetical protein | - |
| EGM66_RS25455 () | 4744129..4745169 | - | 1041 | WP_001314683.1 | tail fiber domain-containing protein | - |
| EGM66_RS25460 () | 4745179..4745460 | - | 282 | WP_000654155.1 | hypothetical protein | - |
| EGM66_RS25465 () | 4745460..4747835 | - | 2376 | WP_042099016.1 | prophage tail fiber N-terminal domain-containing protein | - |
| EGM66_RS25470 () | 4747956..4748414 | - | 459 | WP_000526135.1 | IS200-IS605 family transposase IS200C | Transposase |
| EGM66_RS25480 () | 4748611..4749210 | - | 600 | WP_001542091.1 | Outer membrane protein X | VF |
| EGM66_RS25485 () | 4749278..4752757 | - | 3480 | WP_021523093.1 | host specificity protein J | - |
| EGM66_RS25490 () | 4752818..4753420 | - | 603 | WP_049286672.1 | tail assembly protein | - |
| EGM66_RS25495 () | 4753357..4754100 | - | 744 | WP_032153655.1 | C40 family peptidase | - |
| EGM66_RS25500 () | 4754106..4754804 | - | 699 | WP_001551186.1 | phage minor tail protein L | - |
| EGM66_RS25505 () | 4754804..4755133 | - | 330 | WP_000847345.1 | phage tail protein | - |
| EGM66_RS25510 () | 4755130..4757691 | - | 2562 | WP_032153656.1 | phage tail tape measure protein | - |
| EGM66_RS25515 () | 4757684..4758118 | - | 435 | WP_000459457.1 | phage tail assembly protein T | - |
| EGM66_RS25520 () | 4758100..4758522 | - | 423 | WP_000479153.1 | phage minor tail protein G | - |
| EGM66_RS25525 () | 4758538..4759278 | - | 741 | WP_001349920.1 | phage tail protein | - |
| EGM66_RS25530 () | 4759286..4759681 | - | 396 | WP_000683128.1 | phage minor tail U family protein | - |
| EGM66_RS25535 () | 4759678..4760257 | - | 580 | Protein_4432 | phage tail protein | - |
| EGM66_RS25540 () | 4760269..4760622 | - | 354 | WP_000752979.1 | head-tail joining protein | - |
| EGM66_RS25545 () | 4760634..4761032 | - | 399 | WP_020233914.1 | DNA-packaging protein FI | - |
| EGM66_RS25550 () | 4761074..4762099 | - | 1026 | WP_000063277.1 | major capsid protein | - |
| EGM66_RS25555 () | 4762154..4762486 | - | 333 | WP_001708751.1 | head decoration protein | - |
| EGM66_RS25560 () | 4762496..4763815 | - | 1320 | WP_020233915.1 | S49 family peptidase | - |
| EGM66_RS25565 () | 4763796..4765397 | - | 1602 | WP_001356819.1 | phage portal protein | - |
| EGM66_RS25570 () | 4765394..4765600 | - | 207 | WP_000198149.1 | gpW family protein | - |
| EGM66_RS25575 () | 4765597..4767522 | - | 1926 | WP_001027269.1 | phage terminase large subunit family protein | - |
| EGM66_RS25580 () | 4767497..4768042 | - | 546 | WP_000453587.1 | DNA-packaging protein | - |
| EGM66_RS25585 () | 4768431..4768664 | + | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| EGM66_RS25590 () | 4768722..4769132 | + | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| EGM66_RS25595 () | 4769284..4769457 | - | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| EGM66_RS25600 () | 4769629..4769784 | - | 156 | WP_001309517.1 | hypothetical protein | - |
| EGM66_RS25605 () | 4769864..4769929 | - | 66 | WP_120795388.1 | hypothetical protein | - |
| EGM66_RS25610 () | 4769932..4770120 | - | 189 | WP_071524604.1 | cold-shock protein | - |
| EGM66_RS25615 () | 4770131..4770343 | - | 213 | WP_000066495.1 | cold shock protein CspI | - |
| EGM66_RS25620 () | 4770706..4771203 | - | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| EGM66_RS25625 () | 4771200..4771733 | - | 534 | WP_001092971.1 | lysozyme | - |
| EGM66_RS25630 () | 4771730..4772041 | - | 312 | WP_000189916.1 | YdfR family protein | - |
| EGM66_RS25635 () | 4772046..4772261 | - | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| EGM66_RS28330 () | 4772481..4772651 | + | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| EGM66_RS25640 () | 4773015..4773230 | - | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| EGM66_RS25645 () | 4773531..4773743 | + | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| EGM66_RS25650 () | 4773798..4773887 | + | 90 | WP_120795389.1 | hypothetical protein | - |
| EGM66_RS25655 () | 4774165..4774917 | - | 753 | WP_001047135.1 | antitermination protein | - |
| EGM66_RS25660 () | 4774931..4775980 | - | 1050 | WP_001265199.1 | DUF968 domain-containing protein | - |
| EGM66_RS25665 () | 4775982..4776260 | - | 279 | WP_012304870.1 | hypothetical protein | - |
| EGM66_RS25670 () | 4776327..4776578 | - | 252 | WP_000980994.1 | hypothetical protein | - |
| EGM66_RS25675 () | 4776795..4776950 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| EGM66_RS25680 () | 4777022..4777309 | - | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| EGM66_RS25685 () | 4777309..4777548 | - | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| EGM66_RS25690 () | 4777573..4777878 | + | 306 | WP_001326990.1 | hypothetical protein | - |
| EGM66_RS25695 () | 4778081..4778413 | + | 333 | WP_001301033.1 | protein FlxA | - |
| EGM66_RS25700 () | 4778850..4780163 | - | 1314 | WP_000589005.1 | ISNCY family transposase ISCARN112 | Transposase |
| EGM66_RS25705 () | 4780647..4781675 | - | 1029 | WP_001345551.1 | DUF4868 domain-containing protein | - |
| EGM66_RS25710 () | 4781672..4782286 | - | 615 | WP_001265627.1 | hypothetical protein | - |
| EGM66_RS25715 () | 4782495..4783160 | - | 666 | WP_021523102.1 | epoxyqueuosine reductase QueH | - |
| EGM66_RS25720 () | 4783363..4783761 | - | 399 | WP_001151242.1 | DUF977 family protein | - |
| EGM66_RS25725 () | 4783802..4784767 | - | 966 | WP_000054487.1 | hypothetical protein | - |
| EGM66_RS25730 () | 4784748..4785269 | - | 522 | WP_000705355.1 | hypothetical protein | - |
| EGM66_RS25735 () | 4785253..4785480 | - | 228 | WP_000921596.1 | transcriptional regulator | - |
| EGM66_RS25740 () | 4785561..4785968 | + | 408 | WP_000381212.1 | helix-turn-helix domain-containing protein | - |
| EGM66_RS25745 () | 4786137..4786292 | + | 156 | WP_000379575.1 | DUF1391 family protein | - |
| EGM66_RS25750 () | 4786294..4786869 | + | 576 | WP_000344950.1 | hypothetical protein | - |
| EGM66_RS25755 () | 4787356..4787544 | + | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| EGM66_RS25760 () | 4787541..4787732 | + | 192 | WP_001083276.1 | lysis protein YdfD | - |
| EGM66_RS25765 () | 4787826..4790297 | + | 2472 | WP_000048363.1 | exonuclease | - |
| EGM66_RS25770 () | 4790370..4790621 | + | 252 | WP_000005552.1 | excisionase family protein | - |
| EGM66_RS25775 () | 4790656..4791936 | + | 1281 | WP_021523105.1 | Putative defective protein IntQ ; Integrase | Integrase |
| EGM66_RS25785 () | 4792124..4793143 | - | 1020 | WP_000836037.1 | Zn-dependent oxidoreductase | - |
| EGM66_RS25790 () | 4793155..4794369 | - | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| EGM66_RS25795 () | 4794575..4794901 | - | 327 | WP_001314753.1 | YnfA family protein | - |
| EGM66_RS25800 () | 4795036..4795377 | + | 342 | WP_000705205.1 | DUF1283 family protein | - |
| EGM66_RS25805 () | 4795412..4795972 | + | 561 | WP_001138584.1 | spermidine N1-acetyltransferase | - |
| EGM66_RS25810 () | 4795975..4796685 | - | 711 | WP_001445899.1 | YnfC family lipoprotein | - |
| EGM66_RS25815 () | 4796793..4797098 | + | 306 | WP_001295396.1 | DUF1161 domain-containing protein | - |
| EGM66_RS25820 () | 4797297..4799723 | + | 2427 | WP_001551145.1 | dimethyl sulfoxide reductase subunit A | - |
| EGM66_RS25825 () | 4799784..4802207 | + | 2424 | WP_072170800.1 | dimethyl sulfoxide reductase subunit A | - |
| EGM66_RS25830 () | 4802218..4802835 | + | 618 | WP_001520568.1 | dimethylsulfoxide reductase subunit B | - |
| EGM66_RS25835 () | 4802837..4803691 | + | 855 | WP_020233477.1 | dimethyl sulfoxide reductase anchor subunit | - |
| EGM66_RS25840 () | 4803734..4804348 | + | 615 | WP_001520571.1 | Tat proofreading chaperone DmsD | - |
| EGM66_RS25845 () | 4804507..4805799 | + | 1293 | WP_071593650.1 | voltage-gated ClC-type chloride channel ClcB | - |
| EGM66_RS25850 () | 4805752..4806447 | - | 696 | WP_000919226.1 | dethiobiotin synthase | - |
| EGM66_RS25855 () | 4806572..4807792 | - | 1221 | WP_021523109.1 | DNA-binding transcriptional repressor Mlc | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|