MGE detailed information
MGE type: Prophage MGE length: 50429 bp
Accession: NZ_CP033884 Location: 4488716..4539144 Organism: Escherichia coli strain 50579417 Replicon: chromosome
Accession: NZ_CP033884 Location: 4488716..4539144 Organism: Escherichia coli strain 50579417 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EGM66_RS24185 () | 4484212..4484511 | - | 300 | Protein_4169 | sensor domain-containing diguanylate cyclase | - |
| EGM66_RS28315 () | 4484705..4484752 | + | 48 | WP_211180494.1 | protein YnaN | - |
| EGM66_RS24190 () | 4484766..4485749 | + | 984 | WP_000387388.1 | zinc transporter ZntB | - |
| EGM66_RS24195 () | 4486227..4487600 | + | 1374 | WP_000123748.1 | ATP-dependent RNA helicase DbpA | - |
| EGM66_RS24200 () | 4487729..4488664 | - | 936 | WP_001523172.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| EGM66_RS24205 () | 4488716..4489951 | - | 1236 | WP_000040839.1 | Putative defective protein IntQ ; Integrase | Integrase |
| EGM66_RS24210 () | 4489953..4490168 | - | 216 | WP_000079604.1 | excisionase XisR | - |
| EGM66_RS24215 () | 4490268..4490456 | - | 189 | WP_001302840.1 | DUF1187 family protein | - |
| - () | 4490272..4490450 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 4490272..4490450 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 4490272..4490450 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 4490272..4490450 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| EGM66_RS24220 () | 4490494..4490643 | - | 150 | WP_001443846.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| EGM66_RS24225 () | 4490699..4491508 | - | 810 | WP_000166313.1 | recombination protein RecT | - |
| EGM66_RS24230 () | 4491501..4494101 | - | 2601 | WP_000105140.1 | exodeoxyribonuclease VIII | - |
| EGM66_RS24235 () | 4494203..4494478 | - | 276 | WP_001344816.1 | hypothetical protein | - |
| EGM66_RS24240 () | 4494553..4494723 | - | 171 | WP_001352098.1 | conserved protein, Rac prophage | - |
| EGM66_RS24245 () | 4494723..4494944 | - | 222 | WP_000560223.1 | killing protein KilR | - |
| EGM66_RS24250 () | 4495386..4495874 | + | 489 | WP_001312793.1 | superinfection exclusion protein B | - |
| EGM66_RS24255 () | 4495871..4496026 | - | 156 | WP_001169151.1 | YdaF family protein | - |
| EGM66_RS24260 () | 4496037..4496216 | - | 180 | WP_001326317.1 | hypothetical protein | - |
| EGM66_RS24270 () | 4496459..4496878 | - | 420 | WP_000233319.1 | helix-turn-helix domain-containing protein | - |
| EGM66_RS24275 () | 4496958..4497212 | + | 255 | WP_001072342.1 | hypothetical protein | - |
| EGM66_RS24280 () | 4497209..4497631 | + | 423 | WP_000693803.1 | hypothetical protein | - |
| EGM66_RS24285 () | 4497709..4498497 | + | 789 | WP_001396581.1 | hypothetical protein | - |
| EGM66_RS24290 () | 4498504..4499250 | + | 747 | WP_020233967.1 | ATP-binding protein | - |
| EGM66_RS24295 () | 4499273..4500034 | + | 762 | WP_000450716.1 | DUF1627 domain-containing protein | - |
| EGM66_RS24300 () | 4500050..4500472 | + | 423 | WP_029702111.1 | DUF977 family protein | - |
| EGM66_RS24305 () | 4500634..4501137 | + | 504 | WP_000137958.1 | hypothetical protein | - |
| EGM66_RS24315 () | 4501258..4502031 | - | 774 | WP_000200358.1 | KilA-N domain-containing protein | - |
| EGM66_RS24320 () | 4502554..4502679 | + | 126 | WP_001445775.1 | type I toxin-antitoxin system Hok family toxin | - |
| EGM66_RS24325 () | 4502762..4503103 | - | 342 | WP_001445776.1 | DUF1971 domain-containing protein | - |
| EGM66_RS24330 () | 4503971..4504570 | + | 600 | WP_000940344.1 | DUF1367 family protein | - |
| EGM66_RS24335 () | 4504570..4504860 | + | 291 | WP_000228032.1 | DUF1364 domain-containing protein | - |
| EGM66_RS24340 () | 4504857..4505399 | + | 543 | WP_000640106.1 | DUF1133 family protein | - |
| EGM66_RS24345 () | 4505621..4506190 | + | 570 | WP_001208722.1 | hypothetical protein | - |
| EGM66_RS24350 () | 4506159..4506461 | - | 303 | WP_001328752.1 | hypothetical protein | - |
| EGM66_RS24355 () | 4506538..4506879 | + | 342 | WP_000781775.1 | phage holin, lambda family | - |
| EGM66_RS24360 () | 4506883..4507359 | + | 477 | WP_023153991.1 | glycoside hydrolase family protein | - |
| EGM66_RS24365 () | 4507576..4507761 | + | 186 | WP_001228696.1 | prophage lysis lipoprotein RzoD | - |
| EGM66_RS24370 () | 4507958..4509415 | + | 1458 | WP_001097895.1 | Trk system potassium transporter TrkG | - |
| EGM66_RS24375 () | 4509553..4510344 | + | 792 | WP_001291105.1 | ParB/Srx family N-terminal domain-containing protein | - |
| EGM66_RS24380 () | 4510337..4511269 | + | 933 | WP_020233805.1 | hypothetical protein | - |
| EGM66_RS24385 () | 4511205..4511456 | + | 252 | WP_000613571.1 | hypothetical protein | - |
| EGM66_RS24390 () | 4511460..4512554 | + | 1095 | WP_000089448.1 | terminase small subunit | - |
| EGM66_RS24395 () | 4512535..4513836 | + | 1302 | WP_000625348.1 | terminase family protein | - |
| EGM66_RS24400 () | 4513839..4515245 | + | 1407 | WP_000763701.1 | DUF4055 domain-containing protein | - |
| EGM66_RS24405 () | 4515229..4516341 | + | 1113 | WP_001363932.1 | hypothetical protein | - |
| EGM66_RS24410 () | 4516446..4517210 | + | 765 | WP_000770042.1 | hypothetical protein | - |
| EGM66_RS24415 () | 4517309..4518448 | + | 1140 | WP_020233804.1 | hypothetical protein | - |
| EGM66_RS28205 () | 4518491..4518667 | + | 177 | WP_000908084.1 | hypothetical protein | - |
| EGM66_RS24420 () | 4518671..4519066 | + | 396 | WP_057950804.1 | hypothetical protein | - |
| EGM66_RS24425 () | 4519066..4519449 | + | 384 | WP_000524260.1 | hypothetical protein | - |
| EGM66_RS24430 () | 4519450..4519830 | + | 381 | WP_042002565.1 | hypothetical protein | - |
| EGM66_RS24435 () | 4519827..4520219 | + | 393 | WP_000673077.1 | hypothetical protein | - |
| EGM66_RS24440 () | 4520246..4521208 | + | 963 | WP_001328756.1 | hypothetical protein | - |
| EGM66_RS24445 () | 4521359..4521718 | + | 360 | WP_122452218.1 | hypothetical protein | - |
| EGM66_RS24450 () | 4521826..4522026 | + | 201 | WP_032139919.1 | hypothetical protein | - |
| EGM66_RS24455 () | 4522190..4525423 | + | 3234 | WP_023153989.1 | phage tail tape measure protein | - |
| EGM66_RS24460 () | 4525416..4525754 | + | 339 | WP_000024051.1 | phage tail protein | - |
| EGM66_RS24465 () | 4525754..4526452 | + | 699 | WP_001152432.1 | phage minor tail protein L | - |
| EGM66_RS24470 () | 4526458..4527201 | + | 744 | WP_001351716.1 | C40 family peptidase | - |
| EGM66_RS24475 () | 4527138..4527740 | + | 603 | WP_049286672.1 | tail assembly protein | - |
| EGM66_RS24480 () | 4527801..4531280 | + | 3480 | WP_021523093.1 | host specificity protein J | - |
| EGM66_RS24485 () | 4531348..4531947 | + | 600 | WP_001542091.1 | Outer membrane protein X | VF |
| EGM66_RS24490 () | 4532012..4534411 | + | 2400 | WP_032152843.1 | prophage tail fiber N-terminal domain-containing protein | - |
| EGM66_RS24495 () | 4534408..4534689 | + | 282 | WP_000654154.1 | hypothetical protein | - |
| EGM66_RS24500 () | 4534699..4535403 | + | 705 | WP_000235967.1 | tail fiber domain-containing protein | - |
| EGM66_RS24505 () | 4535414..4535707 | + | 294 | WP_000355609.1 | hypothetical protein | - |
| EGM66_RS24510 () | 4535727..4535837 | + | 111 | Protein_4234 | tail fiber assembly protein | - |
| EGM66_RS24515 () | 4535935..4536525 | - | 591 | WP_000086527.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| EGM66_RS24520 () | 4536842..4537075 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| EGM66_RS24525 () | 4537144..4537257 | - | 114 | WP_120795384.1 | hypothetical protein | - |
| EGM66_RS24530 () | 4537861..4539144 | + | 1284 | Protein_4238 | MHS family MFS transporter YdfJ | - |
| EGM66_RS24535 () | 4539233..4540693 | + | 1461 | WP_000527786.1 | mannitol dehydrogenase family protein | - |
| EGM66_RS24540 () | 4540729..4540932 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| EGM66_RS24545 () | 4541110..4541796 | - | 687 | WP_000215553.1 | DNA-binding transcriptional regulator YdfH | - |
| EGM66_RS24550 () | 4541885..4542631 | - | 747 | WP_000636571.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|