MGE detailed information
MGE type: Conjugative plasmid MGE length: 88005 bp
Accession: NZ_CP033883 Location: 1..88005 Organism: Escherichia coli strain 50579417 Replicon: plasmid p50579417_2
Accession: NZ_CP033883 Location: 1..88005 Organism: Escherichia coli strain 50579417 Replicon: plasmid p50579417_2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EGM66_RS01665 () | 170..787 | + | 618 | WP_025750220.1 | hypothetical protein | - |
| EGM66_RS01675 () | 1301..1582 | - | 282 | WP_025750222.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| EGM66_RS01680 () | 1579..1848 | - | 270 | WP_000079928.1 | hypothetical protein | Antitoxin Detail |
| EGM66_RS28020 () | 1903..2061 | - | 159 | WP_032151498.1 | hypothetical protein | - |
| EGM66_RS01695 () | 2756..3628 | - | 873 | WP_000729438.1 | incFII family plasmid replication initiator RepA | - |
| EGM66_RS01710 () | 4331..4972 | + | 642 | Protein_5 | transcription termination factor NusG | - |
| EGM66_RS01715 () | 5112..5774 | + | 663 | WP_005082527.1 | hypothetical protein | - |
| EGM66_RS27920 () | 6041..6184 | + | 144 | WP_000176500.1 | hypothetical protein | - |
| EGM66_RS01725 () | 6265..6507 | + | 243 | WP_021515452.1 | PilI type IV pilus biogenesis protein | - |
| EGM66_RS01730 () | 6623..6943 | + | 321 | WP_001447108.1 | hypothetical protein | - |
| EGM66_RS01735 () | 7184..8254 | + | 1071 | WP_000730430.1 | hypothetical protein | VF |
| EGM66_RS01740 () | 8258..8695 | + | 438 | WP_000539952.1 | hypothetical protein | VF |
| EGM66_RS01745 () | 8727..10346 | + | 1620 | WP_001035562.1 | Outer membrane lipoprotein BfpB | VF |
| EGM66_RS01750 () | 10367..11662 | + | 1296 | WP_000129883.1 | type 4b pilus protein PilO2 | - |
| EGM66_RS01755 () | 11652..12110 | + | 459 | WP_000095887.1 | hypothetical protein | VF |
| EGM66_RS01760 () | 12213..13721 | + | 1509 | WP_000880806.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| EGM66_RS01765 () | 13723..14817 | + | 1095 | WP_000697154.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| EGM66_RS01770 () | 14879..15415 | + | 537 | WP_000111521.1 | hypothetical protein | VF |
| EGM66_RS01775 () | 15460..15945 | + | 486 | WP_001080767.1 | hypothetical protein | VF |
| EGM66_RS01780 () | 15961..16587 | + | 627 | WP_013307883.1 | prepilin peptidase | - |
| EGM66_RS01785 () | 16605..17870 | + | 1266 | WP_013307882.1 | hypothetical protein | VF |
| EGM66_RS28025 () | 17849..18229 | - | 381 | WP_168220877.1 | pilus assembly protein | - |
| EGM66_RS01805 () | 18766..19005 | + | 240 | WP_000271302.1 | hypothetical protein | - |
| EGM66_RS01810 () | 19010..19408 | - | 399 | WP_113367734.1 | phage tail protein | - |
| EGM66_RS01815 () | 19463..20587 | + | 1125 | WP_013307880.1 | site-specific integrase | - |
| EGM66_RS01820 () | 20800..21621 | + | 822 | WP_001681675.1 | hypothetical protein | - |
| EGM66_RS01825 () | 21723..22925 | + | 1203 | WP_013307879.1 | conjugal transfer protein TraF | - |
| EGM66_RS01830 () | 23029..23487 | + | 459 | WP_025750398.1 | DotD/TraH family lipoprotein | - |
| EGM66_RS01835 () | 23484..24320 | + | 837 | WP_000745049.1 | hypothetical protein | VF |
| EGM66_RS01840 () | 24304..25452 | + | 1149 | WP_013307876.1 | putative protein YggR | VF |
| EGM66_RS01845 () | 25449..25739 | + | 291 | WP_000817801.1 | IcmT/TraK family protein | - |
| EGM66_RS01850 () | 26151..27413 | + | 1263 | WP_000608644.1 | IS1380 family transposase ISEcp1 | Transposase |
| EGM66_RS01855 () | 27663..28538 | + | 876 | WP_001617865.1 | Beta-lactamase CTX-M-97 | ARG |
| EGM66_RS01860 () | 28573..29028 | + | 456 | Protein_33 | IS5 family transposase | - |
| EGM66_RS01865 () | 29036..29617 | + | 582 | WP_025750394.1 | hypothetical protein | - |
| EGM66_RS01870 () | 29971..34032 | + | 4062 | WP_013307874.1 | DNA primase | - |
| EGM66_RS01875 () | 34049..34399 | + | 351 | WP_001056367.1 | hypothetical protein | - |
| EGM66_RS01880 () | 34411..35106 | + | 696 | WP_001681668.1 | DotI/IcmL family type IV secretion protein | - |
| EGM66_RS01885 () | 35117..36091 | + | 975 | WP_000547383.1 | hypothetical protein | VF |
| EGM66_RS01890 () | 36095..37432 | + | 1338 | WP_013307873.1 | conjugal transfer protein TraO | - |
| EGM66_RS01895 () | 37429..38142 | + | 714 | WP_000787003.1 | conjugal transfer protein TraP | - |
| EGM66_RS01900 () | 38142..38669 | + | 528 | WP_001407937.1 | conjugal transfer protein TraQ | - |
| EGM66_RS01905 () | 38716..39114 | + | 399 | WP_000088813.1 | hypothetical protein | - |
| EGM66_RS01910 () | 39171..39422 | + | 252 | WP_001277573.1 | hypothetical protein | - |
| EGM66_RS01915 () | 39337..40155 | + | 819 | WP_000753550.1 | hypothetical protein | - |
| EGM66_RS01925 () | 40450..43494 | + | 3045 | WP_013307872.1 | conjugal transfer nucleotide-binding protein | - |
| EGM66_RS01930 () | 43494..44114 | + | 621 | WP_000286854.1 | hypothetical protein | - |
| EGM66_RS01935 () | 44072..45277 | + | 1206 | WP_001189548.1 | conjugal transfer protein TraW | - |
| EGM66_RS01940 () | 45274..45843 | + | 570 | WP_000650752.1 | conjugal transfer protein TraX | - |
| EGM66_RS01945 () | 45918..48083 | + | 2166 | WP_000691808.1 | DotA/TraY family protein | - |
| EGM66_RS01950 () | 48171..48824 | + | 654 | WP_001401768.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| EGM66_RS01955 () | 49098..50684 | + | 1587 | WP_000004564.1 | TnsA endonuclease N-terminal domain-containing protein | - |
| EGM66_RS01960 () | 50822..50974 | - | 153 | WP_001302699.1 | Hok/Gef family protein | - |
| EGM66_RS01965 () | 51304..51546 | + | 243 | WP_000650923.1 | hypothetical protein | - |
| EGM66_RS01975 () | 51837..52205 | + | 369 | WP_001345852.1 | hypothetical protein | - |
| EGM66_RS01980 () | 52209..52424 | + | 216 | WP_000266543.1 | hypothetical protein | - |
| EGM66_RS01990 () | 52622..53245 | - | 624 | WP_001155247.1 | DNA-binding protein | - |
| EGM66_RS01995 () | 53404..53871 | + | 468 | WP_000598962.1 | thermonuclease family protein | - |
| EGM66_RS28030 () | 54021..54197 | + | 177 | WP_001054907.1 | hypothetical protein | - |
| EGM66_RS02000 () | 54260..54511 | - | 252 | WP_001081067.1 | hypothetical protein | - |
| EGM66_RS02010 () | 55152..56450 | + | 1299 | WP_001402878.1 | IncI1-type conjugal transfer protein TrbA | - |
| EGM66_RS02015 () | 56447..57571 | + | 1125 | WP_000152382.1 | DsbC family protein | - |
| EGM66_RS02020 () | 57552..59852 | + | 2301 | WP_013307869.1 | TraM recognition domain-containing protein | - |
| EGM66_RS02025 () | 60073..62793 | - | 2721 | WP_000991405.1 | Protein TraI | Relaxase |
| EGM66_RS02030 () | 62805..63137 | - | 333 | WP_001291057.1 | hypothetical protein | - |
| EGM66_RS02035 () | 63370..63705 | + | 336 | WP_032151482.1 | hypothetical protein | - |
| EGM66_RS02040 () | 63791..64639 | - | 849 | WP_013307867.1 | DUF4942 domain-containing protein | - |
| EGM66_RS28035 () | 64988..65185 | + | 198 | Protein_67 | hypothetical protein | - |
| EGM66_RS02055 () | 65219..65470 | + | 252 | WP_000148286.1 | helix-turn-helix domain-containing protein | - |
| EGM66_RS02060 () | 65501..65746 | - | 246 | WP_001260882.1 | hypothetical protein | - |
| EGM66_RS02065 () | 65746..66636 | - | 891 | WP_000038343.1 | Recombination-promoting nuclease RpnA | VF |
| EGM66_RS02070 () | 66633..67022 | - | 390 | WP_000833767.1 | hypothetical protein | - |
| EGM66_RS02075 () | 67199..67465 | - | 267 | WP_001247860.1 | hypothetical protein | - |
| EGM66_RS02080 () | 67558..67992 | - | 435 | WP_000218862.1 | hypothetical protein | - |
| EGM66_RS02095 () | 68725..69225 | - | 501 | WP_014065718.1 | antirestriction protein ArdA | - |
| EGM66_RS02105 () | 69687..70283 | - | 597 | WP_000977998.1 | hypothetical protein | - |
| EGM66_RS02110 () | 70280..70999 | - | 720 | WP_025749128.1 | plasmid SOS inhibition protein A | - |
| EGM66_RS02115 () | 70996..71430 | - | 435 | WP_025749130.1 | conjugation system SOS inhibitor PsiB | - |
| EGM66_RS02120 () | 71485..73443 | - | 1959 | WP_025749133.1 | ParB/RepB/Spo0J family partition protein | - |
| EGM66_RS02125 () | 73502..73735 | - | 234 | WP_000006020.1 | DUF905 domain-containing protein | - |
| EGM66_RS02130 () | 73793..74320 | - | 528 | WP_001276120.1 | single-stranded DNA-binding protein | - |
| EGM66_RS28040 () | 74689..74757 | + | 69 | Protein_81 | pilus protein | - |
| EGM66_RS02145 () | 75090..75281 | - | 192 | WP_001024836.1 | hypothetical protein | - |
| EGM66_RS02150 () | 75278..75700 | - | 423 | WP_000271732.1 | DUF1380 family protein | - |
| EGM66_RS02155 () | 75747..76049 | - | 303 | WP_001589340.1 | antirestriction protein | - |
| EGM66_RS02170 () | 76586..77356 | - | 771 | WP_001584932.1 | hypothetical protein | - |
| EGM66_RS02175 () | 77401..77835 | - | 435 | WP_001578114.1 | DUF1380 family protein | - |
| EGM66_RS02180 () | 77849..78070 | - | 222 | WP_001104893.1 | hypothetical protein | - |
| EGM66_RS02185 () | 78071..78754 | - | 684 | WP_000086147.1 | DNA methylase | - |
| EGM66_RS02190 () | 78830..79141 | - | 312 | WP_031942433.1 | hypothetical protein | - |
| EGM66_RS02195 () | 79138..80040 | - | 903 | WP_001739825.1 | DUF1281 domain-containing protein | - |
| EGM66_RS02210 () | 80721..81113 | - | 393 | WP_000272884.1 | plasmid partitioning/stability family protein | - |
| EGM66_RS02215 () | 81117..82091 | - | 975 | WP_025749785.1 | StbA family protein | - |
| EGM66_RS28045 () | 82329..82703 | - | 375 | WP_000752652.1 | hypothetical protein | - |
| EGM66_RS02225 () | 82703..83335 | - | 633 | WP_000312331.1 | ParA family protein | - |
| EGM66_RS28050 () | 83919..84248 | - | 330 | Protein_95 | IS91 family transposase ISShvi3 | Transposase |
| EGM66_RS28055 () | 84242..84673 | + | 432 | Protein_96 | hypothetical protein | - |
| EGM66_RS02235 () | 84709..85405 | - | 697 | Protein_97 | IS1 family transposase | - |
| EGM66_RS02240 () | 85617..86936 | + | 1320 | WP_160470889.1 | cation:dicarboxylase symporter family transporter | - |
| EGM66_RS02245 () | 87170..87866 | + | 697 | Protein_99 | IS1 family transposase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|