MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 31882 bp
Accession: NZ_CP033879 Location: 1..31882 Organism: Escherichia coli strain 50579417 Replicon: plasmid p50579417_5
Accession: NZ_CP033879 Location: 1..31882 Organism: Escherichia coli strain 50579417 Replicon: plasmid p50579417_5
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EGM66_RS00010 () | 571..819 | + | 249 | WP_000520549.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| EGM66_RS00015 () | 816..1163 | + | 348 | WP_000681613.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| EGM66_RS00025 () | 1526..2029 | + | 504 | WP_000781817.1 | hypothetical protein | - |
| EGM66_RS00030 () | 2033..3262 | + | 1230 | WP_001329504.1 | hypothetical protein | Relaxase |
| EGM66_RS00035 () | 3339..3632 | + | 294 | WP_060578246.1 | LuxR family transcriptional regulator | - |
| EGM66_RS00040 () | 3629..3844 | + | 216 | WP_000760375.1 | EexN family lipoprotein | - |
| EGM66_RS00045 () | 4201..4821 | + | 621 | WP_000157548.1 | Type IV secretion system protein virB1 | VF |
| EGM66_RS00050 () | 4889..5161 | + | 273 | WP_001329503.1 | Type IV secretion system protein virB2 | VF |
| EGM66_RS00055 () | 5180..7927 | + | 2748 | WP_000105982.1 | Type IV secretion system protein virB4 | VF |
| EGM66_RS00060 () | 7939..8655 | + | 717 | WP_123908716.1 | type IV secretion system protein VirB5 | - |
| EGM66_RS00065 () | 8667..9761 | + | 1095 | WP_000046889.1 | type IV secretion system protein | - |
| EGM66_RS00085 () | 10275..10961 | + | 687 | WP_001290765.1 | Type IV secretion system protein virB8 | VF |
| EGM66_RS00090 () | 10958..11866 | + | 909 | WP_001329500.1 | Type IV secretion system protein virB9 | VF |
| EGM66_RS00095 () | 11859..12977 | + | 1119 | WP_032221731.1 | Type IV secretion system protein virB10 | VF |
| EGM66_RS00100 () | 12979..14007 | + | 1029 | WP_077250421.1 | Type IV secretion system protein VirB11 | VF |
| EGM66_RS00105 () | 13994..15856 | + | 1863 | WP_000847106.1 | type IV secretory system conjugative DNA transfer family protein | - |
| EGM66_RS00110 () | 15868..16287 | + | 420 | WP_000737411.1 | hypothetical protein | - |
| EGM66_RS00115 () | 16271..16576 | + | 306 | WP_000147044.1 | IncN plasmid KikA protein | - |
| EGM66_RS00120 () | 16582..16836 | + | 255 | WP_000415096.1 | hypothetical protein | - |
| EGM66_RS00125 () | 16939..17247 | + | 309 | WP_000647576.1 | hypothetical protein | - |
| EGM66_RS00130 () | 17244..17738 | + | 495 | WP_032221728.1 | thermonuclease family protein | - |
| EGM66_RS00135 () | 17754..18158 | + | 405 | WP_001218543.1 | hypothetical protein | - |
| EGM66_RS28000 () | 18214..18438 | + | 225 | Protein_23 | DNA topoisomerase III | - |
| EGM66_RS00145 () | 18443..20596 | + | 2154 | WP_001235750.1 | type IA DNA topoisomerase | - |
| EGM66_RS00150 () | 20593..20799 | + | 207 | WP_000850856.1 | hemolysin expression modulator Hha | - |
| EGM66_RS00155 () | 20817..21281 | + | 465 | WP_032221746.1 | H-NS histone family protein | - |
| EGM66_RS00160 () | 21385..22041 | + | 657 | WP_077250420.1 | hypothetical protein | - |
| EGM66_RS00165 () | 22124..22330 | + | 207 | Protein_28 | hypothetical protein | - |
| EGM66_RS00170 () | 22597..23421 | + | 825 | WP_032221744.1 | Tyrosine recombinase XerD | VF |
| EGM66_RS00175 () | 23526..24185 | + | 660 | WP_000516222.1 | hypothetical protein | VF |
| EGM66_RS00180 () | 24279..24581 | + | 303 | WP_001096507.1 | hypothetical protein | - |
| EGM66_RS00200 () | 25486..26013 | - | 528 | WP_032221738.1 | DUF2726 domain-containing protein | - |
| EGM66_RS00205 () | 26149..26553 | - | 405 | WP_001541973.1 | hypothetical protein | - |
| EGM66_RS00210 () | 26619..27626 | - | 1008 | WP_032221737.1 | replication initiation protein | - |
| EGM66_RS00215 () | 29330..29845 | + | 516 | WP_001025395.1 | J domain-containing protein | - |
| EGM66_RS00220 () | 29950..30492 | + | 543 | WP_001083906.1 | hypothetical protein | - |
| EGM66_RS00225 () | 30489..30740 | + | 252 | WP_001230707.1 | hypothetical protein | - |
| EGM66_RS00230 () | 30727..30954 | + | 228 | WP_000801440.1 | hypothetical protein | - |
| EGM66_RS00240 () | 31408..31707 | + | 300 | WP_000650309.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|