MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 89566 bp
Accession: NZ_CP033832 Location: 37920..127485 Organism: Pseudomonas aeruginosa strain FDAARGOS_505 Replicon: chromosome
Accession: NZ_CP033832 Location: 37920..127485 Organism: Pseudomonas aeruginosa strain FDAARGOS_505 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EGY23_RS00165 () | 33492..37691 | + | 4200 | WP_023083207.1 | two-partner secretion system exoprotein TpsA4 | - |
| EGY23_RS00170 () | 38057..38923 | + | 867 | WP_003111785.1 | ParA family protein | - |
| EGY23_RS00175 () | 38925..39662 | + | 738 | WP_023083208.1 | hypothetical protein | - |
| EGY23_RS00180 () | 39659..40156 | + | 498 | WP_003111783.1 | hypothetical protein | - |
| EGY23_RS00185 () | 40162..40614 | + | 453 | Protein_34 | hypothetical protein | - |
| EGY23_RS00190 () | 40675..41304 | + | 630 | WP_044060901.1 | hypothetical protein | - |
| EGY23_RS00195 () | 41304..42005 | + | 702 | WP_023083210.1 | DUF2786 domain-containing protein | - |
| EGY23_RS00200 () | 42002..42709 | + | 708 | WP_023083211.1 | HNH endonuclease | - |
| EGY23_RS00205 () | 42693..42917 | + | 225 | WP_003134074.1 | hypothetical protein | - |
| EGY23_RS00210 () | 42914..44257 | + | 1344 | WP_023083212.1 | replicative DNA helicase | - |
| EGY23_RS33575 () | 44696..45142 | - | 447 | WP_031631896.1 | hypothetical protein | - |
| EGY23_RS00220 () | 45320..45505 | + | 186 | WP_023083214.1 | hypothetical protein | - |
| EGY23_RS00225 () | 45495..46022 | + | 528 | WP_004352849.1 | hypothetical protein | - |
| EGY23_RS00230 () | 46019..46276 | + | 258 | WP_004352848.1 | hypothetical protein | - |
| EGY23_RS00235 () | 46269..46511 | + | 243 | WP_023083215.1 | hypothetical protein | - |
| EGY23_RS00240 () | 46504..46737 | + | 234 | WP_003103841.1 | hypothetical protein | - |
| EGY23_RS00245 () | 46737..47753 | + | 1017 | WP_004352847.1 | nucleoid-associated protein YejK | - |
| EGY23_RS00250 () | 47756..48010 | + | 255 | WP_009316384.1 | Arc family DNA-binding protein | - |
| EGY23_RS00255 () | 48007..49743 | + | 1737 | WP_004352845.1 | ParB family protein | - |
| EGY23_RS00260 () | 49771..50538 | + | 768 | WP_004352844.1 | DUF2857 domain-containing protein | - |
| EGY23_RS00265 () | 50535..51806 | + | 1272 | WP_023083217.1 | hypothetical protein | - |
| EGY23_RS00275 () | 52403..52600 | + | 198 | WP_019396765.1 | hypothetical protein | - |
| EGY23_RS00280 () | 52757..53485 | + | 729 | WP_004352842.1 | TIGR03761 family integrating conjugative element protein | - |
| EGY23_RS00285 () | 53491..54039 | + | 549 | WP_004352841.1 | DUF3158 family protein | - |
| EGY23_RS00290 () | 54086..54925 | + | 840 | WP_003105750.1 | Rha family transcriptional regulator | - |
| EGY23_RS00295 () | 54955..55443 | + | 489 | WP_004352840.1 | single-stranded DNA-binding protein | - |
| EGY23_RS00300 () | 55599..55766 | + | 168 | WP_128729268.1 | CrpP family protein | - |
| EGY23_RS00305 () | 55832..56050 | - | 219 | WP_023083218.1 | hypothetical protein | - |
| EGY23_RS00310 () | 56064..56261 | - | 198 | WP_023083219.1 | hypothetical protein | - |
| EGY23_RS00315 () | 56277..56687 | - | 411 | WP_003134109.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| EGY23_RS00320 () | 56687..56917 | - | 231 | WP_031634724.1 | antitoxin | Antitoxin Detail |
| EGY23_RS00325 () | 57173..59092 | + | 1920 | WP_004352838.1 | type I DNA topoisomerase | - |
| EGY23_RS00330 () | 59400..59609 | + | 210 | WP_003105733.1 | cold-shock protein | - |
| EGY23_RS00335 () | 59830..61719 | + | 1890 | WP_003105732.1 | hypothetical protein | - |
| EGY23_RS00340 () | 61716..63689 | + | 1974 | WP_003105731.1 | DEAD/DEAH box helicase | - |
| EGY23_RS00345 () | 63811..64593 | + | 783 | WP_004352836.1 | phage Gp37/Gp68 family protein | - |
| EGY23_RS00350 () | 64626..65879 | + | 1254 | WP_004352835.1 | three-Cys-motif partner protein TcmP | - |
| EGY23_RS00355 () | 66053..67177 | + | 1125 | WP_003099755.1 | hypothetical protein | VF |
| EGY23_RS00360 () | 67177..68886 | + | 1710 | WP_004352834.1 | Outer membrane lipoprotein BfpB | VF |
| EGY23_RS00365 () | 68890..70215 | + | 1326 | WP_004352832.1 | type 4b pilus protein PilO2 | - |
| EGY23_RS00370 () | 70205..70738 | + | 534 | WP_004352829.1 | type IV pilus biogenesis protein PilP | - |
| EGY23_RS00375 () | 70747..72327 | + | 1581 | WP_003123334.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| EGY23_RS00380 () | 72327..73406 | + | 1080 | WP_003123335.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| EGY23_RS00385 () | 73428..73958 | + | 531 | WP_004352827.1 | hypothetical protein | VF |
| EGY23_RS00390 () | 73955..74896 | + | 942 | WP_004352826.1 | Flp pilus assembly complex ATPase component TadA | - |
| EGY23_RS00395 () | 74901..76229 | + | 1329 | WP_004352824.1 | hypothetical protein | VF |
| EGY23_RS00400 () | 76258..76695 | + | 438 | WP_004352822.1 | hypothetical protein | VF |
| EGY23_RS33580 () | 77761..78006 | + | 246 | WP_003123340.1 | hypothetical protein | - |
| EGY23_RS33585 () | 78081..78257 | + | 177 | WP_015503587.1 | hypothetical protein | - |
| EGY23_RS00415 () | 78718..79197 | + | 480 | WP_003117056.1 | DUF3577 domain-containing protein | - |
| EGY23_RS33590 () | 79335..79493 | + | 159 | WP_003109368.1 | hypothetical protein | - |
| EGY23_RS00420 () | 79567..79764 | + | 198 | WP_015503588.1 | hypothetical protein | - |
| EGY23_RS00430 () | 80249..80956 | + | 708 | WP_004352808.1 | hypothetical protein | - |
| EGY23_RS00435 () | 81192..81542 | + | 351 | WP_004347949.1 | hypothetical protein | - |
| EGY23_RS00440 () | 81599..82390 | + | 792 | WP_003123344.1 | DUF3275 family protein | - |
| EGY23_RS00445 () | 82493..82855 | + | 363 | WP_003117061.1 | hypothetical protein | - |
| EGY23_RS00450 () | 82923..83177 | + | 255 | WP_003117062.1 | hypothetical protein | - |
| EGY23_RS00455 () | 83270..83875 | + | 606 | WP_003125296.1 | hypothetical protein | - |
| EGY23_RS00460 () | 83905..85350 | + | 1446 | WP_003125297.1 | class I SAM-dependent methyltransferase | - |
| EGY23_RS00465 () | 85455..87704 | + | 2250 | WP_023083221.1 | DEAD/DEAH box helicase | - |
| EGY23_RS00470 () | 87729..88112 | - | 384 | WP_123789178.1 | hypothetical protein | - |
| EGY23_RS00475 () | 88318..88611 | + | 294 | WP_021264362.1 | IS3 family transposase ISCARN64 | Transposase |
| EGY23_RS00480 () | 88608..89474 | + | 867 | WP_004352797.1 | IS3 family transposase ISAeca4 | Transposase |
| EGY23_RS00485 () | 89734..90426 | + | 693 | WP_004352794.1 | hypothetical protein | - |
| EGY23_RS00490 () | 90437..91192 | + | 756 | WP_003099814.1 | TIGR03759 family integrating conjugative element protein | - |
| EGY23_RS00495 () | 91177..91758 | + | 582 | WP_003123352.1 | hypothetical protein | VF |
| EGY23_RS00500 () | 91755..92255 | + | 501 | WP_004352788.1 | integrating conjugative element protein | - |
| EGY23_RS00505 () | 92327..92533 | + | 207 | WP_073689213.1 | hypothetical protein | - |
| EGY23_RS00510 () | 92537..94768 | + | 2232 | WP_003159694.1 | type IV conjugative transfer system coupling protein TraD | - |
| EGY23_RS00515 () | 94768..95514 | + | 747 | WP_023083223.1 | TIGR03747 family integrating conjugative element membrane protein | - |
| EGY23_RS00520 () | 95532..96023 | + | 492 | WP_031631905.1 | hypothetical protein | - |
| EGY23_RS00525 () | 96264..97745 | + | 1482 | WP_023083224.1 | UvrD-helicase domain-containing protein | - |
| EGY23_RS33595 () | 97877..98986 | + | 1110 | WP_023083225.1 | hypothetical protein | - |
| EGY23_RS00535 () | 99032..99343 | - | 312 | WP_003117074.1 | DUF2845 domain-containing protein | - |
| EGY23_RS00540 () | 99516..99815 | + | 300 | WP_003117075.1 | hypothetical protein | - |
| EGY23_RS00545 () | 99909..100247 | + | 339 | WP_003158157.1 | RAQPRD family integrative conjugative element protein | - |
| EGY23_RS00550 () | 100244..100483 | + | 240 | WP_003121019.1 | TIGR03758 family integrating conjugative element protein | - |
| EGY23_RS00555 () | 100501..100857 | + | 357 | WP_003117077.1 | TIGR03745 family integrating conjugative element membrane protein | - |
| EGY23_RS00560 () | 100868..101254 | + | 387 | WP_003117078.1 | TIGR03750 family conjugal transfer protein | - |
| EGY23_RS00565 () | 101251..101910 | + | 660 | WP_003117079.1 | TIGR03746 family integrating conjugative element protein | - |
| EGY23_RS00570 () | 101907..102791 | + | 885 | WP_003121020.1 | TIGR03749 family integrating conjugative element protein | - |
| EGY23_RS00575 () | 102775..104280 | + | 1506 | WP_003121021.1 | TIGR03752 family integrating conjugative element protein | - |
| EGY23_RS00580 () | 104258..104701 | + | 444 | WP_003121022.1 | TIGR03751 family conjugal transfer lipoprotein | - |
| EGY23_RS00585 () | 104701..107643 | + | 2943 | WP_010792229.1 | conjugative transfer ATPase | - |
| EGY23_RS00590 () | 107640..107924 | + | 285 | WP_003099860.1 | hypothetical protein | - |
| EGY23_RS00595 () | 107921..108580 | + | 660 | WP_003109405.1 | DsbA family protein | - |
| EGY23_RS00600 () | 108577..108795 | - | 219 | WP_003109406.1 | hypothetical protein | - |
| EGY23_RS00615 () | 110642..111322 | + | 681 | WP_004574802.1 | cupin domain-containing protein | - |
| EGY23_RS00620 () | 111319..111903 | + | 585 | WP_004574803.1 | Biofilm operon icaADBC HTH-type negative transcriptional regulator IcaR | VF |
| EGY23_RS00625 () | 111963..112739 | + | 777 | WP_004574804.1 | 3-alpha-hydroxycholanate dehydrogenase (NADP(+)) | VF |
| EGY23_RS00630 () | 112754..113320 | + | 567 | WP_004574805.1 | OsmC family protein | - |
| EGY23_RS00635 () | 113761..114225 | + | 465 | WP_016851620.1 | hypothetical protein | - |
| EGY23_RS00640 () | 114228..114788 | + | 561 | WP_014003957.1 | Tn3 family transposase TnpR_TnAs1 | Transposase |
| EGY23_RS00645 () | 114792..117758 | + | 2967 | WP_011005944.1 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| EGY23_RS00650 () | 118257..118688 | + | 432 | WP_003111736.1 | TIGR03757 family integrating conjugative element protein | - |
| EGY23_RS00655 () | 118688..119626 | + | 939 | WP_016851627.1 | TIGR03756 family integrating conjugative element protein | - |
| EGY23_RS00660 () | 119644..121026 | + | 1383 | WP_023083227.1 | integrating conjugative element protein | - |
| EGY23_RS00665 () | 121026..121373 | + | 348 | WP_023083228.1 | hypothetical protein | - |
| EGY23_RS00670 () | 121370..122914 | + | 1545 | WP_023083229.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| EGY23_RS00675 () | 122949..123290 | - | 342 | WP_023083230.1 | DUF3742 family protein | - |
| EGY23_RS00685 () | 123904..125823 | + | 1920 | WP_023083231.1 | helicase/relaxase domain-containing protein | - |
| EGY23_RS00690 () | 125820..127121 | + | 1302 | WP_023083232.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| EGY23_RS00710 () | 127923..130487 | - | 2565 | WP_003145976.1 | ATP-dependent chaperone ClpB | - |
| EGY23_RS00715 () | 130643..131371 | - | 729 | WP_003102588.1 | peptidoglycan editing factor PgeF | - |
| EGY23_RS00720 () | 131368..132330 | - | 963 | WP_003094686.1 | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|