MGE detailed information
MGE type: IScluster/Tn MGE length: 22091 bp
Accession: NZ_CP033714 Location: 46228..68318 Organism: Yersinia pseudotuberculosis strain FDAARGOS_580 Replicon: plasmid unnamed
Accession: NZ_CP033714 Location: 46228..68318 Organism: Yersinia pseudotuberculosis strain FDAARGOS_580 Replicon: plasmid unnamed
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EGX52_RS00280 () | 41892..42311 | - | 420 | WP_042592522.1 | hypothetical protein | - |
| EGX52_RS00285 () | 42329..42609 | - | 281 | Protein_53 | DDE-type integrase/transposase/recombinase | - |
| EGX52_RS23305 () | 42660..42971 | + | 312 | WP_041175527.1 | hypothetical protein | - |
| EGX52_RS00290 () | 43015..43407 | - | 393 | WP_011191375.1 | type III secretion system chaperone SycT | - |
| EGX52_RS00295 () | 43407..44375 | - | 969 | WP_011191374.1 | T3SS effector cysteine protease YopT | - |
| EGX52_RS00300 () | 44875..45423 | + | 549 | WP_011191373.1 | type III secretion system effector YopK | - |
| EGX52_RS00305 () | 45582..45903 | + | 322 | Protein_58 | hypothetical protein | - |
| EGX52_RS00315 () | 46049..46189 | + | 141 | Protein_59 | complement resistance protein TraT | - |
| EGX52_RS00325 () | 47387..47878 | + | 492 | Protein_61 | complement resistance protein TraT | - |
| EGX52_RS00330 () | 47985..49131 | + | 1147 | Protein_62 | IS3 family transposase | - |
| EGX52_RS00340 () | 49891..51057 | + | 1167 | WP_002220902.1 | Sporulation initiation inhibitor protein Soj | VF |
| EGX52_RS00345 () | 51054..52019 | + | 966 | WP_002213354.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| EGX52_RS23310 () | 52179..52415 | + | 237 | WP_155490924.1 | hypothetical protein | - |
| EGX52_RS00360 () | 52838..53296 | + | 459 | WP_025470851.1 | IS200-IS605 family transposase IS200G | Transposase |
| EGX52_RS00370 () | 53532..53824 | + | 293 | Protein_67 | IS6 family transposase ISEas1 | Transposase |
| EGX52_RS00375 () | 53990..54232 | + | 243 | WP_002224342.1 | type II toxin-antitoxin system ParD family antitoxin | Antitoxin Detail |
| EGX52_RS00380 () | 54225..54524 | + | 300 | WP_057532641.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| EGX52_RS00385 () | 54664..55323 | - | 660 | WP_072186775.1 | Outer membrane virulence protein YopE | VF |
| EGX52_RS00390 () | 55517..55909 | + | 393 | WP_002213403.1 | YopE regulator | VF |
| EGX52_RS00395 () | 55972..56616 | - | 645 | Protein_72 | IS3 family transposase ISYen3 | Transposase |
| EGX52_RS00400 () | 56719..57891 | + | 1173 | WP_057532639.1 | IS21 family transposase IS21 | Transposase |
| EGX52_RS00405 () | 57891..58289 | + | 399 | Protein_74 | IS21 family transposase IS21 | Transposase |
| EGX52_RS00410 () | 58667..59092 | + | 426 | WP_002213267.1 | hypothetical protein | VF |
| EGX52_RS00425 () | 60439..60768 | - | 330 | WP_002229829.1 | hypothetical protein | - |
| EGX52_RS00430 () | 60907..61371 | - | 465 | WP_032466923.1 | hypothetical protein | - |
| EGX52_RS00435 () | 61390..61941 | - | 552 | WP_002213258.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| EGX52_RS00440 () | 62105..64420 | + | 2316 | WP_057532649.1 | Tn3 family transposase ISEc63 | Transposase |
| EGX52_RS00445 () | 64453..64803 | - | 351 | Protein_81 | IS3 family transposase IS1351 | Transposase |
| EGX52_RS00450 () | 65406..66704 | + | 1299 | WP_057532652.1 | Adhesin YadA | VF |
| EGX52_RS00455 () | 66707..67006 | - | 300 | WP_106461760.1 | hypothetical protein | - |
| EGX52_RS00460 () | 67033..67302 | - | 270 | WP_057532654.1 | transposase | - |
| EGX52_RS00465 () | 67371..67829 | + | 459 | WP_057532656.1 | hypothetical protein | - |
| EGX52_RS00475 () | 68001..68318 | + | 318 | WP_050310039.1 | IS3 family transposase ISKpn37 | Transposase |
| EGX52_RS00480 () | 68312..68752 | + | 441 | WP_172959817.1 | IS3 family transposase | - |
| EGX52_RS00485 () | 68735..68974 | - | 240 | Protein_88 | DDE-type integrase/transposase/recombinase | - |
| EGX52_RS00490 () | 69169..69417 | + | 249 | WP_032466929.1 | phospholipase | - |
| EGX52_RS00495 () | 69555..69809 | + | 255 | WP_002229817.1 | replication regulatory protein RepA | - |
| EGX52_RS00500 () | 70051..70125 | + | 75 | WP_002233140.1 | RepA leader peptide Tap | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|