MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 70312 bp
Accession: NZ_CP033714 Location: 1..70312 Organism: Yersinia pseudotuberculosis strain FDAARGOS_580 Replicon: plasmid unnamed
Accession: NZ_CP033714 Location: 1..70312 Organism: Yersinia pseudotuberculosis strain FDAARGOS_580 Replicon: plasmid unnamed
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EGX52_RS00015 () | 1846..2085 | + | 240 | WP_002213291.1 | hypothetical protein | - |
| EGX52_RS00025 () | 2263..2575 | + | 313 | Protein_2 | IS3 family transposase ISKpn37 | Transposase |
| EGX52_RS00030 () | 2831..3280 | + | 450 | WP_002229809.1 | hypothetical protein | VF |
| EGX52_RS00035 () | 3288..5486 | + | 2199 | WP_011191359.1 | Protein kinase YpkA | VF |
| EGX52_RS00040 () | 5882..6748 | + | 867 | WP_002225474.1 | Effector protein YopJ | VF |
| EGX52_RS00045 () | 7340..7918 | - | 579 | Protein_6 | IS3 family transposase ISYps8 | Transposase |
| EGX52_RS00050 () | 7921..8154 | + | 234 | Protein_7 | transposase domain-containing protein | - |
| EGX52_RS00055 () | 8437..9843 | + | 1407 | WP_002213278.1 | Tyrosine-protein phosphatase YopH | VF |
| EGX52_RS00060 () | 10064..10336 | - | 273 | Protein_9 | transposase | - |
| EGX52_RS00065 () | 10355..11372 | - | 1018 | Protein_10 | IS3 family transposase | - |
| EGX52_RS00075 () | 11920..12267 | - | 348 | WP_002212907.1 | Yop proteins translocation protein M | VF |
| EGX52_RS00080 () | 12492..13157 | - | 666 | WP_010981371.1 | Yop proteins translocation protein L | VF |
| EGX52_RS00085 () | 13103..13732 | - | 630 | WP_002361471.1 | Yop proteins translocation protein K | VF |
| EGX52_RS00090 () | 13732..14466 | - | 735 | WP_002212912.1 | Yop proteins translocation lipoprotein J | VF |
| EGX52_RS00095 () | 14473..14820 | - | 348 | WP_002212914.1 | Yop proteins translocation protein I | VF |
| EGX52_RS00100 () | 14821..15318 | - | 498 | WP_002212915.1 | Yop proteins translocation protein H | VF |
| EGX52_RS00105 () | 15315..15662 | - | 348 | WP_011191389.1 | Putative Yop proteins translocation protein G | VF |
| EGX52_RS00110 () | 15664..15927 | - | 264 | WP_002212916.1 | Yop proteins translocation protein F | VF |
| EGX52_RS00115 () | 15928..16128 | - | 201 | WP_002212917.1 | Putative Yop proteins translocation protein E | VF |
| EGX52_RS00120 () | 16125..17384 | - | 1260 | WP_002212919.1 | Yop proteins translocation protein D | VF |
| EGX52_RS00125 () | 17381..19204 | - | 1824 | WP_042592532.1 | Yop proteins translocation protein C | VF |
| EGX52_RS00130 () | 19210..19623 | - | 414 | WP_002212925.1 | Chaperone protein YscB | VF |
| EGX52_RS00135 () | 19849..19947 | - | 99 | WP_002229797.1 | type III secretion system protein YscA | - |
| EGX52_RS00140 () | 20026..20841 | - | 816 | WP_002212931.1 | Virulence regulon transcriptional activator VirF | VF |
| EGX52_RS00145 () | 20965..21360 | - | 396 | WP_002222527.1 | Exoenzyme S synthesis protein B | VF |
| EGX52_RS00150 () | 21935..22999 | - | 1065 | WP_002212936.1 | Yop proteins translocation protein U | VF |
| EGX52_RS00155 () | 22999..23784 | - | 786 | WP_002212938.1 | Surface presentation of antigens protein SpaR | VF |
| EGX52_RS00160 () | 23781..24047 | - | 267 | WP_002212945.1 | hypothetical protein | VF |
| EGX52_RS00165 () | 24049..24702 | - | 654 | WP_002212947.1 | Surface presentation of antigens protein SpaP | VF |
| EGX52_RS00170 () | 24699..25622 | - | 924 | WP_050309924.1 | Yop proteins translocation protein Q | VF |
| EGX52_RS00175 () | 25619..27028 | - | 1410 | WP_123784573.1 | hypothetical protein | VF |
| EGX52_RS00180 () | 27028..27492 | - | 465 | WP_002212952.1 | Yop proteins translocation protein O | VF |
| EGX52_RS00185 () | 27489..28808 | - | 1320 | WP_002212955.1 | putative ATP synthase YscN | VF |
| EGX52_RS00190 () | 29006..29887 | + | 882 | WP_002212958.1 | Outer membrane protein YopN | VF |
| EGX52_RS00195 () | 29868..30146 | + | 279 | WP_002212965.1 | Protein TyeA | VF |
| EGX52_RS00200 () | 30133..30504 | + | 372 | WP_002229794.1 | Chaperone protein SycN | VF |
| EGX52_RS00205 () | 30501..30869 | + | 369 | WP_002212969.1 | Yop proteins translocation protein X | VF |
| EGX52_RS00210 () | 30866..31210 | + | 345 | WP_002229791.1 | Chaperone protein YscY | VF |
| EGX52_RS00215 () | 31197..33311 | + | 2115 | WP_002212971.1 | Invasion protein InvA | VF |
| EGX52_RS00220 () | 33308..33748 | + | 441 | WP_002220918.1 | hypothetical protein | VF |
| EGX52_RS00225 () | 33790..34077 | + | 288 | WP_002212973.1 | hypothetical protein | VF |
| EGX52_RS00230 () | 34079..35059 | + | 981 | WP_057532617.1 | Virulence-associated V antigen | VF |
| EGX52_RS00235 () | 35072..35578 | + | 507 | WP_002222758.1 | Chaperone protein IpgC | VF |
| EGX52_RS00240 () | 35556..36761 | + | 1206 | WP_057532616.1 | Protein YopB | VF |
| EGX52_RS00245 () | 36780..37700 | + | 921 | WP_002212987.1 | Protein YopD | VF |
| EGX52_RS00250 () | 38168..38805 | - | 638 | Protein_46 | IS6 family transposase | - |
| EGX52_RS00255 () | 38826..39041 | + | 216 | WP_011191379.1 | hypothetical protein | - |
| EGX52_RS00260 () | 39365..40657 | + | 1293 | WP_162484363.1 | Outer membrane protein YopM | VF |
| EGX52_RS00265 () | 40700..41017 | - | 318 | Protein_49 | IS256 family transposase ISSod4 | Transposase |
| EGX52_RS00270 () | 40899..41144 | - | 246 | WP_116442925.1 | transposase | - |
| EGX52_RS00275 () | 41147..41365 | + | 219 | Protein_51 | IS6 family transposase | - |
| EGX52_RS00280 () | 41892..42311 | - | 420 | WP_042592522.1 | hypothetical protein | - |
| EGX52_RS00285 () | 42329..42609 | - | 281 | Protein_53 | DDE-type integrase/transposase/recombinase | - |
| EGX52_RS23305 () | 42660..42971 | + | 312 | WP_041175527.1 | hypothetical protein | - |
| EGX52_RS00290 () | 43015..43407 | - | 393 | WP_011191375.1 | Chaperone protein SycT | VF |
| EGX52_RS00295 () | 43407..44375 | - | 969 | WP_011191374.1 | Cysteine protease YopT | VF |
| EGX52_RS00300 () | 44875..45423 | + | 549 | WP_011191373.1 | hypothetical protein | VF |
| EGX52_RS00305 () | 45582..45903 | + | 322 | Protein_58 | hypothetical protein | - |
| EGX52_RS00315 () | 46049..46189 | + | 141 | Protein_59 | complement resistance protein TraT | - |
| EGX52_RS00325 () | 47387..47878 | + | 492 | Protein_61 | complement resistance protein TraT | - |
| EGX52_RS00330 () | 47985..49131 | + | 1147 | Protein_62 | IS3 family transposase | - |
| EGX52_RS00340 () | 49891..51057 | + | 1167 | WP_002220902.1 | Sporulation initiation inhibitor protein Soj | VF |
| EGX52_RS00345 () | 51054..52019 | + | 966 | WP_002213354.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| EGX52_RS23310 () | 52179..52415 | + | 237 | WP_155490924.1 | hypothetical protein | - |
| EGX52_RS00360 () | 52838..53296 | + | 459 | WP_025470851.1 | IS200-IS605 family transposase IS200G | Transposase |
| EGX52_RS00370 () | 53532..53824 | + | 293 | Protein_67 | IS6 family transposase ISEas1 | Transposase |
| EGX52_RS00375 () | 53990..54232 | + | 243 | WP_002224342.1 | type II toxin-antitoxin system ParD family antitoxin | Antitoxin Detail |
| EGX52_RS00380 () | 54225..54524 | + | 300 | WP_057532641.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| EGX52_RS00385 () | 54664..55323 | - | 660 | WP_072186775.1 | Outer membrane virulence protein YopE | VF |
| EGX52_RS00390 () | 55517..55909 | + | 393 | WP_002213403.1 | YopE regulator | VF |
| EGX52_RS00395 () | 55972..56616 | - | 645 | Protein_72 | IS3 family transposase ISYen3 | Transposase |
| EGX52_RS00400 () | 56719..57891 | + | 1173 | WP_057532639.1 | IS21 family transposase IS21 | Transposase |
| EGX52_RS00405 () | 57891..58289 | + | 399 | Protein_74 | IS21 family transposase IS21 | Transposase |
| EGX52_RS00410 () | 58667..59092 | + | 426 | WP_002213267.1 | hypothetical protein | VF |
| EGX52_RS00425 () | 60439..60768 | - | 330 | WP_002229829.1 | hypothetical protein | - |
| EGX52_RS00430 () | 60907..61371 | - | 465 | WP_032466923.1 | hypothetical protein | - |
| EGX52_RS00435 () | 61390..61941 | - | 552 | WP_002213258.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| EGX52_RS00440 () | 62105..64420 | + | 2316 | WP_057532649.1 | Tn3 family transposase ISEc63 | Transposase |
| EGX52_RS00445 () | 64453..64803 | - | 351 | Protein_81 | IS3 family transposase IS1351 | Transposase |
| EGX52_RS00450 () | 65406..66704 | + | 1299 | WP_057532652.1 | Adhesin YadA | VF |
| EGX52_RS00455 () | 66707..67006 | - | 300 | WP_106461760.1 | hypothetical protein | - |
| EGX52_RS00460 () | 67033..67302 | - | 270 | WP_057532654.1 | transposase | - |
| EGX52_RS00465 () | 67371..67829 | + | 459 | WP_057532656.1 | hypothetical protein | - |
| EGX52_RS00475 () | 68001..68318 | + | 318 | WP_050310039.1 | IS3 family transposase ISKpn37 | Transposase |
| EGX52_RS00480 () | 68312..68752 | + | 441 | WP_172959817.1 | IS3 family transposase ISKpn37 | Transposase |
| EGX52_RS00485 () | 68735..68974 | - | 240 | Protein_88 | DDE-type integrase/transposase/recombinase | - |
| EGX52_RS00490 () | 69169..69417 | + | 249 | WP_032466929.1 | Phospholipase D | VF |
| EGX52_RS00495 () | 69555..69809 | + | 255 | WP_002229817.1 | replication regulatory protein RepA | - |
| EGX52_RS00500 () | 70051..70125 | + | 75 | WP_002233140.1 | RepA leader peptide Tap | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|