MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 70300 bp
Accession: NZ_CP033697 Location: 1..70300 Organism: Yersinia pestis strain FDAARGOS_601 Replicon: plasmid unnamed1
Accession: NZ_CP033697 Location: 1..70300 Organism: Yersinia pestis strain FDAARGOS_601 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EGX46_RS00010 () | 1109..1975 | + | 867 | WP_002213287.1 | Effector protein YopJ | VF |
| EGX46_RS00015 () | 2561..3139 | - | 579 | Protein_2 | IS3 family transposase ISYpe1 | Transposase |
| EGX46_RS00020 () | 3142..3375 | + | 234 | Protein_3 | transposase domain-containing protein | - |
| EGX46_RS00025 () | 3658..5064 | + | 1407 | WP_002213278.1 | Tyrosine-protein phosphatase YopH | VF |
| EGX46_RS00030 () | 5285..5557 | - | 273 | Protein_5 | transposase | - |
| EGX46_RS00035 () | 5576..6392 | - | 817 | Protein_6 | IS3 family transposase ISEca11 | Transposase |
| EGX46_RS00040 () | 6478..7500 | + | 1023 | WP_000255944.1 | IS21 family transposase IS100kyp | Transposase |
| EGX46_RS00045 () | 7497..8279 | + | 783 | WP_001317493.1 | IS21 family transposase IS100kyp | Transposase |
| EGX46_RS00050 () | 8352..8564 | - | 213 | Protein_9 | IS3 family transposase ISEca11 | Transposase |
| EGX46_RS00060 () | 9112..9459 | - | 348 | WP_002212907.1 | Yop proteins translocation protein M | VF |
| EGX46_RS00065 () | 9684..10349 | - | 666 | WP_010981371.1 | Yop proteins translocation protein L | VF |
| EGX46_RS00070 () | 10295..10924 | - | 630 | WP_002361471.1 | Yop proteins translocation protein K | VF |
| EGX46_RS00075 () | 10924..11658 | - | 735 | WP_002212912.1 | Yop proteins translocation lipoprotein J | VF |
| EGX46_RS00080 () | 11665..12012 | - | 348 | WP_002212914.1 | Yop proteins translocation protein I | VF |
| EGX46_RS00085 () | 12013..12510 | - | 498 | WP_002212915.1 | Yop proteins translocation protein H | VF |
| EGX46_RS00090 () | 12507..12854 | - | 348 | WP_002229801.1 | Putative Yop proteins translocation protein G | VF |
| EGX46_RS00095 () | 12856..13119 | - | 264 | WP_002212916.1 | Yop proteins translocation protein F | VF |
| EGX46_RS00100 () | 13120..13320 | - | 201 | WP_002212917.1 | Putative Yop proteins translocation protein E | VF |
| EGX46_RS00105 () | 13317..14576 | - | 1260 | WP_002212919.1 | Yop proteins translocation protein D | VF |
| EGX46_RS00110 () | 14573..16396 | - | 1824 | WP_002212923.1 | Yop proteins translocation protein C | VF |
| EGX46_RS00115 () | 16402..16815 | - | 414 | WP_002212925.1 | Chaperone protein YscB | VF |
| EGX46_RS00120 () | 17041..17139 | - | 99 | WP_002229797.1 | type III secretion system protein YscA | - |
| EGX46_RS00125 () | 17218..18033 | - | 816 | WP_002212931.1 | Virulence regulon transcriptional activator VirF | VF |
| EGX46_RS00130 () | 18157..18552 | - | 396 | WP_002222527.1 | Exoenzyme S synthesis protein B | VF |
| EGX46_RS00135 () | 19128..20192 | - | 1065 | WP_002212936.1 | Yop proteins translocation protein U | VF |
| EGX46_RS00140 () | 20192..20977 | - | 786 | WP_002212938.1 | Surface presentation of antigens protein SpaR | VF |
| EGX46_RS00145 () | 20974..21240 | - | 267 | WP_002212945.1 | hypothetical protein | VF |
| EGX46_RS00150 () | 21242..21895 | - | 654 | WP_002212947.1 | Surface presentation of antigens protein SpaP | VF |
| EGX46_RS00155 () | 21892..22815 | - | 924 | WP_002212948.1 | Yop proteins translocation protein Q | VF |
| EGX46_RS00160 () | 22812..24179 | - | 1368 | WP_002212950.1 | hypothetical protein | VF |
| EGX46_RS00165 () | 24179..24643 | - | 465 | WP_002212952.1 | Yop proteins translocation protein O | VF |
| EGX46_RS00170 () | 24640..25959 | - | 1320 | WP_002212955.1 | putative ATP synthase YscN | VF |
| EGX46_RS00175 () | 26157..27038 | + | 882 | WP_002212958.1 | Outer membrane protein YopN | VF |
| EGX46_RS00180 () | 27019..27297 | + | 279 | WP_002212965.1 | Protein TyeA | VF |
| EGX46_RS00185 () | 27284..27655 | + | 372 | WP_002229794.1 | Chaperone protein SycN | VF |
| EGX46_RS00190 () | 27652..28020 | + | 369 | WP_002212969.1 | Yop proteins translocation protein X | VF |
| EGX46_RS00195 () | 28017..28361 | + | 345 | WP_002229791.1 | Chaperone protein YscY | VF |
| EGX46_RS00200 () | 28348..30462 | + | 2115 | WP_002212971.1 | Invasion protein InvA | VF |
| EGX46_RS00205 () | 30459..30899 | + | 441 | WP_002220918.1 | hypothetical protein | VF |
| EGX46_RS00210 () | 30941..31228 | + | 288 | WP_002212973.1 | hypothetical protein | VF |
| EGX46_RS00215 () | 31230..32210 | + | 981 | WP_002212981.1 | Virulence-associated V antigen | VF |
| EGX46_RS00220 () | 32223..32729 | + | 507 | WP_002222758.1 | Chaperone protein IpgC | VF |
| EGX46_RS00225 () | 32707..33912 | + | 1206 | WP_002212985.1 | Protein YopB | VF |
| EGX46_RS00230 () | 33931..34851 | + | 921 | WP_002212987.1 | Protein YopD | VF |
| EGX46_RS00235 () | 35319..35956 | - | 638 | Protein_45 | IS6 family transposase | - |
| EGX46_RS00240 () | 35977..36186 | + | 210 | WP_002229781.1 | hypothetical protein | - |
| EGX46_RS00245 () | 36580..37809 | + | 1230 | WP_002229779.1 | Outer membrane protein YopM | VF |
| EGX46_RS00250 () | 37852..38169 | - | 318 | Protein_48 | IS256 family transposase ISSod4 | Transposase |
| EGX46_RS00255 () | 38051..38296 | - | 246 | WP_116442925.1 | transposase | - |
| EGX46_RS00260 () | 38299..38517 | + | 219 | Protein_50 | IS6 family transposase | - |
| EGX46_RS00265 () | 39045..39464 | - | 420 | WP_002222515.1 | hypothetical protein | - |
| EGX46_RS00270 () | 39482..39763 | - | 282 | Protein_52 | DDE-type integrase/transposase/recombinase | - |
| EGX46_RS00275 () | 40169..40567 | - | 399 | WP_002213004.1 | Chaperone protein SycT | VF |
| EGX46_RS00280 () | 40567..41535 | - | 969 | WP_002213006.1 | Cysteine protease YopT | VF |
| EGX46_RS00285 () | 42035..42583 | + | 549 | WP_002213007.1 | hypothetical protein | VF |
| EGX46_RS00290 () | 42742..43035 | + | 294 | Protein_56 | IS3 family transposase | - |
| EGX46_RS00300 () | 43181..43810 | + | 630 | WP_002229770.1 | hypothetical protein | - |
| EGX46_RS00305 () | 43917..45062 | + | 1146 | Protein_58 | IS3 family transposase | - |
| EGX46_RS00315 () | 45822..46988 | + | 1167 | WP_002220902.1 | Sporulation initiation inhibitor protein Soj | VF |
| EGX46_RS00320 () | 46985..47950 | + | 966 | WP_002213354.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| EGX46_RS23905 () | 48110..48346 | + | 237 | WP_154020274.1 | hypothetical protein | - |
| EGX46_RS24015 () | 48495..48668 | - | 174 | WP_002213357.1 | hypothetical protein | - |
| EGX46_RS00330 () | 48754..49046 | + | 293 | Protein_63 | IS6 family transposase ISEas1 | Transposase |
| EGX46_RS00335 () | 49212..49454 | + | 243 | WP_002224342.1 | type II toxin-antitoxin system ParD family antitoxin | Antitoxin Detail |
| EGX46_RS00340 () | 49447..49746 | + | 300 | WP_002213360.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| EGX46_RS00345 () | 49886..50545 | - | 660 | WP_002229754.1 | Outer membrane virulence protein YopE | VF |
| EGX46_RS00350 () | 50739..51131 | + | 393 | WP_002213403.1 | YopE regulator | VF |
| EGX46_RS00355 () | 51194..51838 | - | 645 | Protein_68 | IS3 family transposase ISYen3 | Transposase |
| EGX46_RS00360 () | 51941..53113 | + | 1173 | WP_002220893.1 | IS21 family transposase IS21 | Transposase |
| EGX46_RS00365 () | 53113..53511 | + | 399 | Protein_70 | IS21 family transposase IS21 | Transposase |
| EGX46_RS00370 () | 53887..54312 | + | 426 | WP_002213267.1 | hypothetical protein | VF |
| EGX46_RS00385 () | 55659..55988 | - | 330 | WP_002229829.1 | hypothetical protein | - |
| EGX46_RS00390 () | 56127..56591 | - | 465 | WP_002224338.1 | hypothetical protein | - |
| EGX46_RS00395 () | 56610..57161 | - | 552 | WP_002213258.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| EGX46_RS00400 () | 57325..59640 | + | 2316 | WP_002220934.1 | Tn3 family transposase ISEc63 | Transposase |
| EGX46_RS00405 () | 59673..60023 | - | 351 | Protein_77 | IS3 family transposase IS1351 | Transposase |
| EGX46_RS00410 () | 60623..61926 | + | 1304 | Protein_78 | Adhesin YadA | VF |
| EGX46_RS24115 () | 61996..62154 | + | 159 | Protein_79 | EamA family transporter | - |
| EGX46_RS00420 () | 62252..62521 | - | 270 | WP_042469136.1 | transposase | - |
| EGX46_RS00425 () | 62590..63048 | + | 459 | WP_002213246.1 | hypothetical protein | - |
| EGX46_RS00435 () | 63220..63537 | + | 318 | WP_002213244.1 | IS3 family transposase ISKpn37 | Transposase |
| EGX46_RS00440 () | 63561..63968 | + | 408 | WP_002213294.1 | IS3 family transposase ISKpn37 | Transposase |
| EGX46_RS00445 () | 63951..64259 | - | 309 | Protein_84 | DDE-type integrase/transposase/recombinase | - |
| EGX46_RS00450 () | 64385..64633 | + | 249 | WP_002233137.1 | Phospholipase D | VF |
| EGX46_RS00455 () | 64771..65025 | + | 255 | WP_002229817.1 | replication regulatory protein RepA | - |
| EGX46_RS00460 () | 65267..65341 | + | 75 | WP_002233140.1 | RepA leader peptide Tap | - |
| EGX46_RS00465 () | 65322..66200 | + | 879 | WP_002213292.1 | incFII family plasmid replication initiator RepA | - |
| EGX46_RS00475 () | 67373..67612 | + | 240 | WP_002213291.1 | hypothetical protein | - |
| EGX46_RS00485 () | 67790..68102 | + | 313 | Protein_90 | IS3 family transposase ISKpn37 | Transposase |
| EGX46_RS00490 () | 68358..68807 | + | 450 | WP_002229809.1 | hypothetical protein | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|