MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 70174 bp
Accession: NZ_CP033695 Location: 1..70174 Organism: Yersinia pestis strain FDAARGOS_602 Replicon: plasmid unnamed2
Accession: NZ_CP033695 Location: 1..70174 Organism: Yersinia pestis strain FDAARGOS_602 Replicon: plasmid unnamed2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EGX42_RS00665 () | 635..952 | - | 318 | Protein_1 | IS256 family transposase ISSod4 | Transposase |
| EGX42_RS00670 () | 834..1079 | - | 246 | WP_116442925.1 | transposase | - |
| EGX42_RS00675 () | 1082..1300 | + | 219 | Protein_3 | IS6 family transposase | - |
| EGX42_RS00680 () | 1828..2247 | - | 420 | WP_002222515.1 | hypothetical protein | - |
| EGX42_RS00685 () | 2265..2546 | - | 282 | Protein_5 | DDE-type integrase/transposase/recombinase | - |
| EGX42_RS00690 () | 2952..3350 | - | 399 | WP_002213004.1 | Chaperone protein SycT | VF |
| EGX42_RS00695 () | 3350..4318 | - | 969 | WP_002213006.1 | Cysteine protease YopT | VF |
| EGX42_RS00700 () | 4818..5366 | + | 549 | WP_002213007.1 | hypothetical protein | VF |
| EGX42_RS00705 () | 5525..5818 | + | 294 | Protein_9 | IS3 family transposase | - |
| EGX42_RS00715 () | 5964..6593 | + | 630 | WP_002229770.1 | hypothetical protein | - |
| EGX42_RS00720 () | 6700..7845 | + | 1146 | Protein_11 | IS3 family transposase | - |
| EGX42_RS00730 () | 8605..9771 | + | 1167 | WP_002220902.1 | Sporulation initiation inhibitor protein Soj | VF |
| EGX42_RS00735 () | 9768..10733 | + | 966 | WP_002213354.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| EGX42_RS22850 () | 10893..11129 | + | 237 | WP_154020274.1 | hypothetical protein | - |
| EGX42_RS22985 () | 11278..11451 | - | 174 | WP_002213357.1 | hypothetical protein | - |
| EGX42_RS00745 () | 11537..11829 | + | 293 | Protein_16 | IS6 family transposase ISEas1 | Transposase |
| EGX42_RS00750 () | 11995..12237 | + | 243 | WP_002224342.1 | type II toxin-antitoxin system ParD family antitoxin | Antitoxin Detail |
| EGX42_RS00755 () | 12230..12529 | + | 300 | WP_002213360.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| EGX42_RS00760 () | 12669..13328 | - | 660 | WP_002229754.1 | Outer membrane virulence protein YopE | VF |
| EGX42_RS00765 () | 13522..13914 | + | 393 | WP_002213403.1 | YopE regulator | VF |
| EGX42_RS00770 () | 13977..14621 | - | 645 | Protein_21 | IS3 family transposase ISYen3 | Transposase |
| EGX42_RS22810 () | 14724..14825 | + | 102 | Protein_22 | IS21 family transposase IS21 | Transposase |
| EGX42_RS00785 () | 14908..15930 | + | 1023 | WP_000255944.1 | IS21 family transposase IS100kyp | Transposase |
| EGX42_RS00790 () | 15927..16709 | + | 783 | WP_001317493.1 | IS21 family transposase IS100kyp | Transposase |
| EGX42_RS00795 () | 16776..17855 | + | 1080 | Protein_25 | IS21 family transposase IS21 | Transposase |
| EGX42_RS00800 () | 17855..18253 | + | 399 | Protein_26 | IS21 family transposase IS21 | Transposase |
| EGX42_RS00805 () | 18630..19055 | + | 426 | WP_002213267.1 | hypothetical protein | VF |
| EGX42_RS00820 () | 20402..20731 | - | 330 | WP_002229829.1 | hypothetical protein | - |
| EGX42_RS00825 () | 20870..21334 | - | 465 | WP_002224338.1 | hypothetical protein | - |
| EGX42_RS00830 () | 21353..21904 | - | 552 | WP_002213258.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| EGX42_RS00835 () | 22068..24383 | + | 2316 | WP_002213256.1 | Tn3 family transposase ISEc63 | Transposase |
| EGX42_RS00840 () | 24416..24766 | - | 351 | Protein_33 | IS3 family transposase IS1351 | Transposase |
| EGX42_RS00845 () | 25366..26669 | + | 1304 | Protein_34 | Adhesin YadA | VF |
| EGX42_RS22990 () | 26739..26897 | + | 159 | Protein_35 | EamA family transporter | - |
| EGX42_RS00855 () | 26995..27264 | - | 270 | WP_042469136.1 | transposase | - |
| EGX42_RS00860 () | 27333..27791 | + | 459 | WP_002213246.1 | hypothetical protein | - |
| EGX42_RS00870 () | 27963..28280 | + | 318 | WP_002213244.1 | IS3 family transposase ISKpn37 | Transposase |
| EGX42_RS00875 () | 28304..28711 | + | 408 | WP_002231153.1 | IS3 family transposase ISKpn37 | Transposase |
| EGX42_RS00880 () | 28694..29002 | - | 309 | Protein_40 | DDE-type integrase/transposase/recombinase | - |
| EGX42_RS00885 () | 29128..29376 | + | 249 | WP_002233137.1 | Phospholipase D | VF |
| EGX42_RS00890 () | 29514..29768 | + | 255 | WP_002229817.1 | replication regulatory protein RepA | - |
| EGX42_RS00895 () | 30010..30084 | + | 75 | WP_002233140.1 | RepA leader peptide Tap | - |
| EGX42_RS00900 () | 30065..30943 | + | 879 | WP_002213292.1 | incFII family plasmid replication initiator RepA | - |
| EGX42_RS00910 () | 32116..32355 | + | 240 | WP_002213291.1 | hypothetical protein | - |
| EGX42_RS00920 () | 32533..32845 | + | 313 | Protein_46 | IS3 family transposase ISKpn37 | Transposase |
| EGX42_RS00925 () | 33101..33550 | + | 450 | WP_002229809.1 | hypothetical protein | VF |
| EGX42_RS00930 () | 33558..35756 | + | 2199 | WP_002213290.1 | Protein kinase YpkA | VF |
| EGX42_RS00935 () | 36152..36988 | + | 837 | WP_002231152.1 | Effector protein YopJ | VF |
| EGX42_RS00940 () | 37603..38181 | - | 579 | Protein_50 | IS3 family transposase ISYpe1 | Transposase |
| EGX42_RS00945 () | 38184..38417 | + | 234 | Protein_51 | transposase domain-containing protein | - |
| EGX42_RS00950 () | 38700..40106 | + | 1407 | WP_002213278.1 | Tyrosine-protein phosphatase YopH | VF |
| EGX42_RS00955 () | 40327..40599 | - | 273 | Protein_53 | transposase | - |
| EGX42_RS00960 () | 40618..41647 | - | 1030 | Protein_54 | IS3 family transposase | - |
| EGX42_RS00970 () | 42195..42542 | - | 348 | WP_002212907.1 | Yop proteins translocation protein M | VF |
| EGX42_RS00975 () | 42767..43432 | - | 666 | WP_010981371.1 | Yop proteins translocation protein L | VF |
| EGX42_RS00980 () | 43378..44007 | - | 630 | WP_002361471.1 | Yop proteins translocation protein K | VF |
| EGX42_RS00985 () | 44007..44741 | - | 735 | WP_002212912.1 | Yop proteins translocation lipoprotein J | VF |
| EGX42_RS00990 () | 44748..45095 | - | 348 | WP_002212914.1 | Yop proteins translocation protein I | VF |
| EGX42_RS00995 () | 45096..45593 | - | 498 | WP_002212915.1 | Yop proteins translocation protein H | VF |
| EGX42_RS01000 () | 45590..45937 | - | 348 | WP_002229801.1 | Putative Yop proteins translocation protein G | VF |
| EGX42_RS01005 () | 45939..46202 | - | 264 | WP_002212916.1 | Yop proteins translocation protein F | VF |
| EGX42_RS01010 () | 46203..46403 | - | 201 | WP_002212917.1 | Putative Yop proteins translocation protein E | VF |
| EGX42_RS01015 () | 46400..47659 | - | 1260 | WP_002212919.1 | Yop proteins translocation protein D | VF |
| EGX42_RS01020 () | 47656..49479 | - | 1824 | WP_002212923.1 | Yop proteins translocation protein C | VF |
| EGX42_RS01025 () | 49485..49898 | - | 414 | WP_002212925.1 | Chaperone protein YscB | VF |
| EGX42_RS01030 () | 50124..50222 | - | 99 | WP_002229797.1 | type III secretion system protein YscA | - |
| EGX42_RS01035 () | 50301..51116 | - | 816 | WP_002212931.1 | Virulence regulon transcriptional activator VirF | VF |
| EGX42_RS01040 () | 51240..51635 | - | 396 | WP_002222527.1 | Exoenzyme S synthesis protein B | VF |
| EGX42_RS01045 () | 52211..53275 | - | 1065 | WP_002212936.1 | Yop proteins translocation protein U | VF |
| EGX42_RS01050 () | 53275..54060 | - | 786 | WP_002212938.1 | Surface presentation of antigens protein SpaR | VF |
| EGX42_RS01055 () | 54057..54323 | - | 267 | WP_002212945.1 | hypothetical protein | VF |
| EGX42_RS01060 () | 54325..54978 | - | 654 | WP_002212947.1 | Surface presentation of antigens protein SpaP | VF |
| EGX42_RS01065 () | 54975..55898 | - | 924 | WP_002212948.1 | Yop proteins translocation protein Q | VF |
| EGX42_RS01070 () | 55895..57262 | - | 1368 | WP_002212950.1 | hypothetical protein | VF |
| EGX42_RS01075 () | 57262..57726 | - | 465 | WP_002212952.1 | Yop proteins translocation protein O | VF |
| EGX42_RS01080 () | 57723..59042 | - | 1320 | WP_002212955.1 | putative ATP synthase YscN | VF |
| EGX42_RS01085 () | 59240..60121 | + | 882 | WP_002212958.1 | Outer membrane protein YopN | VF |
| EGX42_RS01090 () | 60102..60380 | + | 279 | WP_002212965.1 | Protein TyeA | VF |
| EGX42_RS01095 () | 60367..60738 | + | 372 | WP_002229794.1 | Chaperone protein SycN | VF |
| EGX42_RS01100 () | 60735..61103 | + | 369 | WP_002212969.1 | Yop proteins translocation protein X | VF |
| EGX42_RS01105 () | 61100..61444 | + | 345 | WP_002229791.1 | Chaperone protein YscY | VF |
| EGX42_RS01110 () | 61431..63545 | + | 2115 | WP_002212971.1 | Invasion protein InvA | VF |
| EGX42_RS01115 () | 63542..63982 | + | 441 | WP_002220918.1 | hypothetical protein | VF |
| EGX42_RS01120 () | 64024..64311 | + | 288 | WP_002212973.1 | hypothetical protein | VF |
| EGX42_RS01125 () | 64313..65293 | + | 981 | WP_002212981.1 | Virulence-associated V antigen | VF |
| EGX42_RS01130 () | 65306..65812 | + | 507 | WP_002222758.1 | Chaperone protein IpgC | VF |
| EGX42_RS01135 () | 65790..66995 | + | 1206 | WP_002212985.1 | Protein YopB | VF |
| EGX42_RS01140 () | 67014..67934 | + | 921 | WP_002212987.1 | Protein YopD | VF |
| EGX42_RS01145 () | 68402..69039 | - | 638 | Protein_90 | IS6 family transposase | - |
| EGX42_RS01150 () | 69060..69269 | + | 210 | WP_002229781.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|