MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 141000 bp
Accession: NZ_CP033671 Location: 1..141000 Organism: Burkholderia glumae strain BGR80S Replicon: plasmid p2_BGR80S
Accession: NZ_CP033671 Location: 1..141000 Organism: Burkholderia glumae strain BGR80S Replicon: plasmid p2_BGR80S
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EFP20_RS00005 (EFP20_00005) | 101..790 | + | 690 | WP_012732801.1 | ParA family partition ATPase | - |
| EFP20_RS00010 (EFP20_00010) | 826..1827 | + | 1002 | WP_167539780.1 | ParB/RepB/Spo0J family partition protein | - |
| EFP20_RS00015 (EFP20_00015) | 2554..3417 | + | 864 | WP_257834882.1 | plasmid replication initiator TrfA | - |
| EFP20_RS00020 (EFP20_00020) | 4569..5468 | - | 900 | WP_012732804.1 | Crp/Fnr family transcriptional regulator | - |
| EFP20_RS00025 (EFP20_00025) | 5882..7219 | - | 1338 | WP_257834883.1 | DUF1173 domain-containing protein | - |
| EFP20_RS00030 (EFP20_00030) | 7234..7638 | - | 405 | WP_257834884.1 | hypothetical protein | - |
| EFP20_RS00035 (EFP20_00035) | 7651..8319 | - | 669 | WP_257834885.1 | hypothetical protein | - |
| EFP20_RS00040 (EFP20_00040) | 8334..13049 | - | 4716 | WP_257834886.1 | Autotransporter adhesin SadA | VF |
| EFP20_RS00045 (EFP20_00045) | 13174..13797 | - | 624 | WP_257834887.1 | hypothetical protein | - |
| EFP20_RS00050 (EFP20_00050) | 13794..14111 | - | 318 | WP_012735271.1 | hypothetical protein | - |
| EFP20_RS00055 (EFP20_00055) | 14108..14551 | - | 444 | WP_237711060.1 | protein-disulfide reductase DsbD N-terminal domain-containing protein | - |
| EFP20_RS00060 (EFP20_00060) | 14590..15021 | - | 432 | WP_043308689.1 | hypothetical protein | - |
| EFP20_RS00065 (EFP20_00065) | 15177..15575 | - | 399 | WP_012732812.1 | outer membrane protein assembly factor BamE | - |
| EFP20_RS00070 (EFP20_00070) | 15620..16039 | - | 420 | WP_012732813.1 | hypothetical protein | - |
| EFP20_RS00075 (EFP20_00075) | 16050..18149 | - | 2100 | WP_012735273.1 | zeta toxin family protein | - |
| EFP20_RS00080 (EFP20_00080) | 18161..18409 | - | 249 | WP_257834888.1 | hypothetical protein | - |
| EFP20_RS00085 (EFP20_00085) | 18448..19077 | - | 630 | WP_012735275.1 | Phospholipase D | VF |
| EFP20_RS00090 (EFP20_00090) | 19335..19721 | + | 387 | WP_012735276.1 | hypothetical protein | - |
| EFP20_RS00095 (EFP20_00095) | 19769..23224 | - | 3456 | WP_237711061.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| EFP20_RS00100 (EFP20_00100) | 23227..24672 | - | 1446 | WP_012735278.1 | conjugal transfer protein TraH | - |
| EFP20_RS00105 | 24669..25712 | - | 1044 | WP_012735279.1 | hypothetical protein | - |
| EFP20_RS00110 (EFP20_00110) | 25712..26524 | - | 813 | WP_251107978.1 | conjugal transfer protein TraF | - |
| EFP20_RS00115 (EFP20_00115) | 26634..27110 | - | 477 | WP_043308694.1 | hypothetical protein | - |
| EFP20_RS00120 (EFP20_00120) | 27134..27541 | - | 408 | WP_017432466.1 | hypothetical protein | - |
| EFP20_RS00125 (EFP20_00125) | 27538..28803 | - | 1266 | WP_012735282.1 | conjugal transfer protein TraN | - |
| EFP20_RS00130 (EFP20_00130) | 28800..30098 | - | 1299 | WP_012735283.1 | hypothetical protein | - |
| EFP20_RS00135 (EFP20_00135) | 30098..30889 | - | 792 | WP_012735284.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| EFP20_RS00140 (EFP20_00140) | 30886..31023 | - | 138 | Protein_27 | TraU family protein | - |
| EFP20_RS00145 (EFP20_00145) | 31140..32645 | + | 1506 | WP_012732721.1 | IS21 family transposase ISAav1 | Transposase |
| EFP20_RS00150 (EFP20_00150) | 32638..33435 | + | 798 | WP_012732720.1 | IS21 family transposase ISPa65 | Transposase |
| EFP20_RS00155 (EFP20_00155) | 33335..33838 | + | 504 | WP_257834889.1 | IS66 family transposase ISBmu30 | Transposase |
| EFP20_RS00160 (EFP20_00160) | 33870..35426 | + | 1557 | WP_257834890.1 | IS66 family transposase ISAeh1 | Transposase |
| EFP20_RS00165 (EFP20_00165) | 35624..38152 | - | 2529 | WP_257834891.1 | S8 family peptidase | - |
| EFP20_RS00170 (EFP20_00170) | 38212..39198 | - | 987 | WP_257834892.1 | ATP-dependent zinc metalloprotease FtsH | VF |
| EFP20_RS00175 (EFP20_00175) | 39363..39545 | + | 183 | WP_257834893.1 | hypothetical protein | - |
| EFP20_RS00180 (EFP20_00180) | 39831..40355 | + | 525 | Protein_35 | IS21 family transposase ISBmu3 | Transposase |
| EFP20_RS00185 (EFP20_00185) | 41300..42166 | - | 867 | WP_257813470.1 | IS21 family transposase ISBcen28 | Transposase |
| EFP20_RS00190 (EFP20_00190) | 42163..43419 | - | 1257 | WP_017423782.1 | IS21 family transposase ISBcen28 | Transposase |
| EFP20_RS00195 (EFP20_00195) | 43541..43978 | + | 438 | Protein_38 | IS5 family transposase | - |
| EFP20_RS00200 (EFP20_00200) | 44103..45122 | + | 1020 | WP_257804796.1 | IS110 family transposase IS884 | Transposase |
| EFP20_RS00205 | 45445..45600 | + | 156 | Protein_40 | helix-turn-helix domain-containing protein | - |
| EFP20_RS00210 (EFP20_00205) | 45632..49273 | - | 3642 | WP_257834894.1 | indolepyruvate ferredoxin oxidoreductase family protein | - |
| EFP20_RS00215 (EFP20_00210) | 49304..50746 | - | 1443 | WP_257834895.1 | ATP-binding cassette domain-containing protein | - |
| EFP20_RS00220 (EFP20_00215) | 50796..51557 | - | 762 | WP_257834896.1 | Linear gramicidin dehydrogenase LgrE | VF |
| EFP20_RS00225 (EFP20_00220) | 51574..52002 | - | 429 | WP_257834897.1 | ParB N-terminal domain-containing protein | - |
| EFP20_RS00230 (EFP20_00225) | 52006..53007 | - | 1002 | WP_257834898.1 | Phenazine-1-carboxylate N-methyltransferase | VF |
| EFP20_RS00235 (EFP20_00230) | 53022..54299 | - | 1278 | WP_257834899.1 | MATE family efflux transporter | - |
| EFP20_RS00240 (EFP20_00235) | 54444..55982 | - | 1539 | WP_257834900.1 | hypothetical protein | - |
| EFP20_RS00245 (EFP20_00240) | 55982..56548 | - | 567 | WP_257834901.1 | SRPBCC family protein | - |
| EFP20_RS00250 (EFP20_00245) | 56514..57197 | - | 684 | WP_257834902.1 | hypothetical protein | - |
| EFP20_RS00255 (EFP20_00250) | 57211..61164 | - | 3954 | WP_257834903.1 | Tyrocidine synthase 3 | VF |
| EFP20_RS00260 (EFP20_00255) | 61161..64433 | - | 3273 | WP_257834904.1 | Linear gramicidin synthase subunit D | VF |
| EFP20_RS00265 (EFP20_00260) | 64472..65530 | - | 1059 | WP_257834905.1 | 2,3-diaminopropionate biosynthesis protein SbnB | - |
| EFP20_RS00270 (EFP20_00265) | 65565..66551 | - | 987 | WP_257834906.1 | 2,3-diaminopropionate biosynthesis protein SbnA | - |
| EFP20_RS00275 (EFP20_00270) | 66602..69259 | - | 2658 | WP_257834907.1 | Phthiocerol/phenolphthiocerol synthesis polyketide synthase type I PpsE | VF |
| EFP20_RS00280 (EFP20_00275) | 69256..78795 | - | 9540 | WP_257834908.1 | Tyrocidine synthase 3 | VF |
| EFP20_RS00285 (EFP20_00280) | 78792..80105 | - | 1314 | WP_257834871.1 | cytochrome P450 | - |
| EFP20_RS00290 (EFP20_00285) | 80237..81643 | - | 1407 | WP_257834872.1 | Acylamidase | VF |
| EFP20_RS00295 (EFP20_00290) | 81697..82356 | - | 660 | WP_257834873.1 | Acyl-homoserine-lactone synthase | VF |
| EFP20_RS00300 (EFP20_00295) | 82885..83904 | - | 1020 | WP_252836473.1 | IS110 family transposase IS884 | Transposase |
| EFP20_RS00310 (EFP20_00310) | 85044..85448 | - | 405 | WP_257834874.1 | DUF4902 domain-containing protein | - |
| EFP20_RS00315 (EFP20_00315) | 85666..86379 | + | 714 | WP_257834875.1 | Transcriptional activator protein AnoR | VF |
| EFP20_RS00320 (EFP20_00320) | 86449..88014 | - | 1566 | WP_257834876.1 | IS66 family transposase ISAeh1 | Transposase |
| EFP20_RS00325 (EFP20_00325) | 88215..88964 | - | 750 | WP_012732736.1 | IS21 family transposase ISBmu3 | Transposase |
| EFP20_RS00330 (EFP20_00330) | 88980..90530 | - | 1551 | WP_257829983.1 | IS21 family transposase ISBmu3 | Transposase |
| EFP20_RS00335 | 90579..90716 | + | 138 | WP_017924734.1 | hypothetical protein | - |
| EFP20_RS00340 (EFP20_00335) | 91006..92025 | - | 1020 | WP_012732738.1 | IS110 family transposase IS884 | Transposase |
| EFP20_RS00345 (EFP20_00340) | 92774..94201 | - | 1428 | WP_257834877.1 | AIPR family protein | - |
| EFP20_RS00350 (EFP20_00345) | 94928..95593 | - | 666 | WP_012735319.1 | gamma-mobile-trio protein GmtX | - |
| EFP20_RS00355 (EFP20_00350) | 95590..98196 | - | 2607 | WP_257834878.1 | VPA1269 family protein | - |
| EFP20_RS00360 (EFP20_00355) | 98189..99604 | - | 1416 | WP_012735321.1 | gamma-mobile-trio recombinase GmtY | - |
| EFP20_RS00365 (EFP20_00360) | 99689..100951 | - | 1263 | WP_193373184.1 | MFS transporter | - |
| EFP20_RS00370 (EFP20_00365) | 100902..101666 | - | 765 | WP_012735323.1 | arsenical resistance protein ArsH | - |
| EFP20_RS00375 (EFP20_00370) | 101680..102507 | - | 828 | WP_012735324.1 | arsenic resistance N-acetyltransferase ArsN2 | - |
| EFP20_RS00380 (EFP20_00375) | 102517..103578 | - | 1062 | WP_012735325.1 | ACR3 family arsenite efflux transporter | - |
| EFP20_RS00385 (EFP20_00380) | 103565..104086 | - | 522 | WP_153479259.1 | arsenate reductase ArsC | - |
| EFP20_RS00390 (EFP20_00385) | 104244..104576 | - | 333 | WP_012735327.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| EFP20_RS00395 (EFP20_00390) | 104852..105556 | + | 705 | WP_043308749.1 | translesion DNA synthesis-associated protein ImuA | - |
| EFP20_RS00400 (EFP20_00395) | 105474..106952 | + | 1479 | WP_012735329.1 | DNA polymerase Y family protein | - |
| EFP20_RS00405 (EFP20_00400) | 106959..110015 | + | 3057 | WP_257834879.1 | error-prone DNA polymerase | - |
| EFP20_RS00410 (EFP20_00405) | 109996..111582 | - | 1587 | WP_012732733.1 | IS66 family transposase ISBmu30 | Transposase |
| EFP20_RS00415 (EFP20_00410) | 111682..112035 | - | 354 | WP_012732734.1 | IS66 family transposase ISBmu30 | Transposase |
| EFP20_RS00420 (EFP20_00415) | 112035..112490 | - | 456 | WP_012732735.1 | IS66 family transposase ISRtr5 | Transposase |
| EFP20_RS00425 | 112589..112753 | + | 165 | WP_257834880.1 | hypothetical protein | - |
| EFP20_RS00430 (EFP20_00420) | 112766..113053 | + | 288 | WP_012735331.1 | hypothetical protein | - |
| EFP20_RS00435 (EFP20_00425) | 113600..114694 | - | 1095 | WP_012735332.1 | BsuBI/PstI family type II restriction endonuclease | - |
| EFP20_RS00440 (EFP20_00430) | 114697..116490 | - | 1794 | WP_012735333.1 | Eco57I restriction-modification methylase domain-containing protein | - |
| EFP20_RS00445 (EFP20_00435) | 116494..116730 | - | 237 | WP_012735334.1 | helix-turn-helix transcriptional regulator | - |
| EFP20_RS00450 (EFP20_00440) | 116937..117665 | + | 729 | WP_012735335.1 | IS6 family transposase ISDge13 | Transposase |
| EFP20_RS00455 (EFP20_00445) | 117796..118047 | - | 252 | WP_012735336.1 | hypothetical protein | VF |
| EFP20_RS00460 (EFP20_00450) | 118060..118596 | - | 537 | WP_012735337.1 | hypothetical protein | - |
| EFP20_RS00465 | 118604..119239 | - | 636 | WP_167539782.1 | hypothetical protein | - |
| EFP20_RS00470 (EFP20_00460) | 119251..119502 | - | 252 | WP_012735338.1 | hypothetical protein | VF |
| EFP20_RS00475 (EFP20_00465) | 119515..120177 | - | 663 | WP_012735339.1 | hypothetical protein | - |
| EFP20_RS00480 (EFP20_00470) | 120174..123017 | - | 2844 | WP_012735340.1 | glycosyl hydrolase 108 family protein | - |
| EFP20_RS00485 (EFP20_00475) | 123070..125577 | - | 2508 | WP_012735341.1 | type VI secretion system Vgr family protein | - |
| EFP20_RS00490 (EFP20_00480) | 125984..126712 | - | 729 | WP_012735342.1 | IS6 family transposase ISDge13 | Transposase |
| EFP20_RS00495 (EFP20_00485) | 127179..127862 | + | 684 | WP_043308718.1 | hypothetical protein | - |
| EFP20_RS00500 | 127859..129370 | + | 1512 | WP_050811485.1 | hypothetical protein | - |
| EFP20_RS00505 (EFP20_00495) | 129456..129725 | + | 270 | WP_012735343.1 | hypothetical protein | - |
| EFP20_RS00510 (EFP20_00500) | 129885..130499 | + | 615 | Protein_101 | error-prone DNA polymerase | - |
| EFP20_RS00515 (EFP20_00505) | 130515..130802 | + | 288 | WP_012735344.1 | hypothetical protein | - |
| EFP20_RS00520 | 131906..132100 | - | 195 | WP_124837731.1 | hypothetical protein | - |
| EFP20_RS00525 (EFP20_00515) | 132155..132397 | - | 243 | WP_012735345.1 | hypothetical protein | - |
| EFP20_RS00530 (EFP20_00520) | 132415..132744 | - | 330 | WP_155297075.1 | hypothetical protein | - |
| EFP20_RS00535 (EFP20_00525) | 132993..133394 | - | 402 | WP_012735347.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| EFP20_RS00540 (EFP20_00530) | 133394..133630 | - | 237 | WP_012735348.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| EFP20_RS00545 (EFP20_00540) | 133967..134656 | - | 690 | WP_257739423.1 | hypothetical protein | - |
| EFP20_RS00550 (EFP20_00545) | 134743..136569 | - | 1827 | WP_012735349.1 | site-specific integrase | - |
| EFP20_RS00555 (EFP20_00550) | 136566..136946 | - | 381 | WP_080569442.1 | hypothetical protein | - |
| EFP20_RS00560 (EFP20_00555) | 136949..137266 | - | 318 | WP_050811486.1 | hypothetical protein | - |
| EFP20_RS00565 (EFP20_00560) | 137317..138405 | - | 1089 | Protein_112 | hypothetical protein | - |
| EFP20_RS00570 | 138416..138679 | - | 264 | WP_148271091.1 | hypothetical protein | - |
| EFP20_RS00575 (EFP20_00565) | 138729..138962 | - | 234 | WP_043308726.1 | hypothetical protein | - |
| EFP20_RS00580 (EFP20_00570) | 138969..139265 | - | 297 | WP_043308728.1 | hypothetical protein | - |
| EFP20_RS00585 (EFP20_00575) | 139430..139630 | - | 201 | WP_257806653.1 | hypothetical protein | - |
| EFP20_RS00590 (EFP20_00580) | 139702..140112 | - | 411 | WP_257806654.1 | type II toxin-antitoxin system VapC family toxin | - |
| EFP20_RS00595 (EFP20_00585) | 140109..140351 | - | 243 | WP_257806656.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | - |
| EFP20_RS00600 | 140573..140923 | - | 351 | WP_257834881.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|