MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 153086 bp
Accession: NZ_CP033663 Location: 1..153086 Organism: Burkholderia glumae strain BGR15S Replicon: plasmid p1_BGR15S
Accession: NZ_CP033663 Location: 1..153086 Organism: Burkholderia glumae strain BGR15S Replicon: plasmid p1_BGR15S
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EFP17_RS01955 (EFP17_01960) | 101..745 | + | 645 | WP_017432350.1 | AAA family ATPase | - |
| EFP17_RS01960 (EFP17_01965) | 748..1785 | + | 1038 | WP_017432351.1 | ParB/RepB/Spo0J family partition protein | - |
| EFP17_RS01965 (EFP17_01970) | 1870..3174 | - | 1305 | WP_017432352.1 | replication initiation protein | - |
| EFP17_RS01970 (EFP17_01975) | 4544..5349 | + | 806 | WP_085962370.1 | IS5 family transposase IS1421 | Transposase |
| EFP17_RS01975 (EFP17_01980) | 5571..6392 | - | 822 | WP_257806592.1 | Crp/Fnr family transcriptional regulator | - |
| EFP17_RS01980 (EFP17_01985) | 6888..8225 | - | 1338 | WP_017432354.1 | DUF1173 domain-containing protein | - |
| EFP17_RS01985 (EFP17_01990) | 8240..8659 | - | 420 | WP_017432355.1 | hypothetical protein | - |
| EFP17_RS01990 (EFP17_01995) | 8656..9309 | - | 654 | WP_012732807.1 | hypothetical protein | - |
| EFP17_RS01995 (EFP17_02000) | 9326..14077 | - | 4752 | WP_258910770.1 | Autotransporter adhesin SadA | VF |
| EFP17_RS02000 (EFP17_02005) | 14166..14789 | - | 624 | WP_012732809.1 | hypothetical protein | - |
| EFP17_RS02005 (EFP17_02010) | 14786..15103 | - | 318 | WP_012732810.1 | hypothetical protein | - |
| EFP17_RS02010 (EFP17_02015) | 15100..15543 | - | 444 | WP_230674406.1 | protein-disulfide reductase DsbD N-terminal domain-containing protein | - |
| EFP17_RS02015 (EFP17_02020) | 15582..16013 | - | 432 | WP_017432893.1 | hypothetical protein | - |
| EFP17_RS02020 (EFP17_02025) | 16170..16568 | - | 399 | WP_161522125.1 | outer membrane protein assembly factor BamE | - |
| EFP17_RS02025 (EFP17_02030) | 16613..17032 | - | 420 | WP_161522124.1 | hypothetical protein | - |
| EFP17_RS02030 (EFP17_02035) | 17043..19142 | - | 2100 | WP_257827567.1 | zeta toxin family protein | - |
| EFP17_RS02035 (EFP17_02040) | 19154..19402 | - | 249 | WP_039201920.1 | hypothetical protein | - |
| EFP17_RS02040 (EFP17_02045) | 19441..20070 | - | 630 | WP_252836651.1 | Phospholipase D | VF |
| EFP17_RS02045 (EFP17_02050) | 20328..20714 | + | 387 | WP_257827565.1 | hypothetical protein | - |
| EFP17_RS02050 (EFP17_02055) | 20759..22444 | - | 1686 | WP_257827563.1 | hypothetical protein | - |
| EFP17_RS02055 (EFP17_02060) | 22512..24014 | + | 1503 | WP_257827572.1 | IS21 family transposase ISAlisp1 | Transposase |
| EFP17_RS02060 (EFP17_02065) | 23995..25581 | - | 1587 | WP_012732733.1 | IS66 family transposase ISBmu30 | Transposase |
| EFP17_RS02065 (EFP17_02070) | 25681..26034 | - | 354 | WP_012732734.1 | IS66 family transposase ISBmu30 | Transposase |
| EFP17_RS02070 (EFP17_02075) | 26034..26489 | - | 456 | WP_012732735.1 | IS66 family transposase ISRtr5 | Transposase |
| EFP17_RS02075 | 26967..27350 | - | 384 | WP_257806714.1 | hypothetical protein | - |
| EFP17_RS02080 (EFP17_02085) | 27867..28295 | - | 429 | WP_012734042.1 | type II toxin-antitoxin system VapC family toxin | - |
| EFP17_RS02085 (EFP17_02090) | 28295..28552 | - | 258 | WP_012734043.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| EFP17_RS02090 (EFP17_02095) | 28645..30915 | - | 2271 | WP_257739417.1 | IS91 family transposase ISAzo26 | Transposase |
| EFP17_RS02095 (EFP17_02100) | 30986..31807 | - | 822 | WP_043308413.1 | hypothetical protein | - |
| EFP17_RS02100 (EFP17_02105) | 32001..32534 | - | 534 | WP_148271068.1 | hypothetical protein | - |
| EFP17_RS02105 (EFP17_02110) | 32919..33965 | + | 1047 | WP_012734099.1 | IS481 family transposase IS1419 | Transposase |
| EFP17_RS02110 (EFP17_02115) | 34079..34888 | - | 810 | Protein_31 | IS110 family transposase IS884 | Transposase |
| EFP17_RS02115 (EFP17_02120) | 35076..35723 | - | 648 | Protein_32 | IS6 family transposase ISDge13 | Transposase |
| EFP17_RS02125 | 37379..40813 | + | 3435 | WP_012734047.1 | S-layer family protein | - |
| EFP17_RS02130 (EFP17_02130) | 41314..43425 | + | 2112 | WP_043308443.1 | Toxin RTX-I translocation ATP-binding protein | VF |
| EFP17_RS02135 (EFP17_02135) | 43430..44848 | + | 1419 | WP_257806586.1 | Hemolysin secretion protein D, chromosomal | VF |
| EFP17_RS02140 (EFP17_02140) | 44838..46289 | + | 1452 | WP_012734050.1 | Outer membrane protein TolC | VF |
| EFP17_RS02145 (EFP17_02145) | 46467..46682 | + | 216 | WP_237711043.1 | transposase | - |
| EFP17_RS02150 (EFP17_02150) | 46672..48228 | - | 1557 | WP_012732752.1 | IS66 family transposase ISAeh1 | Transposase |
| EFP17_RS02155 (EFP17_02155) | 48260..48610 | - | 351 | WP_012732753.1 | IS66 family transposase ISBmu30 | Transposase |
| EFP17_RS02160 (EFP17_02160) | 48586..49062 | - | 477 | WP_012734051.1 | IS66 family transposase ISRtr5 | Transposase |
| EFP17_RS02165 (EFP17_02165) | 49167..50723 | - | 1557 | WP_257806588.1 | IS66 family transposase ISAeh1 | Transposase |
| EFP17_RS02170 (EFP17_02170) | 50755..51105 | - | 351 | WP_012732753.1 | IS66 family transposase ISBmu30 | Transposase |
| EFP17_RS02175 (EFP17_02175) | 51081..51557 | - | 477 | WP_012734051.1 | IS66 family transposase ISRtr5 | Transposase |
| EFP17_RS02180 (EFP17_02180) | 51661..51864 | - | 204 | Protein_45 | IS66 family transposase ISRm2 | Transposase |
| EFP17_RS02185 (EFP17_02185) | 51907..52275 | - | 369 | WP_045678674.1 | hypothetical protein | - |
| EFP17_RS02190 (EFP17_02190) | 52406..53185 | - | 780 | WP_043308431.1 | hypothetical protein | - |
| EFP17_RS02195 (EFP17_02195) | 53449..54324 | - | 876 | WP_222105279.1 | reverse transcriptase family protein | - |
| EFP17_RS02200 (EFP17_02200) | 54401..54706 | - | 306 | WP_012734095.1 | helix-turn-helix transcriptional regulator | - |
| EFP17_RS02205 (EFP17_02205) | 55587..55796 | - | 210 | WP_042968082.1 | hypothetical protein | - |
| EFP17_RS02210 (EFP17_02215) | 56433..56744 | - | 312 | WP_127913983.1 | hypothetical protein | - |
| EFP17_RS02215 (EFP17_02220) | 56871..58712 | - | 1842 | WP_012734094.1 | site-specific integrase | - |
| EFP17_RS02220 (EFP17_02225) | 58709..59089 | - | 381 | WP_012734093.1 | hypothetical protein | - |
| EFP17_RS02225 (EFP17_02230) | 59124..59441 | - | 318 | WP_043308427.1 | hypothetical protein | - |
| EFP17_RS02230 (EFP17_02235) | 59504..59914 | - | 411 | WP_012734092.1 | type II toxin-antitoxin system VapC family toxin | - |
| EFP17_RS02235 (EFP17_02240) | 59905..60159 | - | 255 | WP_012734091.1 | antitoxin | - |
| EFP17_RS02240 (EFP17_02245) | 61025..61830 | + | 806 | WP_085962450.1 | IS5 family transposase IS1421 | Transposase |
| EFP17_RS02245 (EFP17_02250) | 61977..62759 | - | 783 | WP_012734088.1 | helix-turn-helix transcriptional regulator | - |
| EFP17_RS02250 (EFP17_02255) | 62862..63521 | + | 660 | WP_012734087.1 | pyridoxamine 5'-phosphate oxidase family protein | - |
| EFP17_RS02255 (EFP17_02260) | 63657..64278 | + | 622 | Protein_60 | DDE-type integrase/transposase/recombinase | - |
| EFP17_RS02260 (EFP17_02265) | 64584..66131 | + | 1548 | WP_012734086.1 | Methyl-accepting chemotaxis protein I | VF |
| EFP17_RS02265 (EFP17_02270) | 66491..66991 | + | 501 | WP_012734085.1 | hypothetical protein | VF |
| EFP17_RS02270 (EFP17_02275) | 67189..67476 | + | 288 | WP_017924497.1 | hypothetical protein | - |
| EFP17_RS02275 (EFP17_02280) | 67669..67959 | + | 291 | WP_230674603.1 | IS6 family transposase ISBj7 | Transposase |
| EFP17_RS02280 | 68218..68358 | - | 141 | WP_080569432.1 | integrase | - |
| EFP17_RS02285 (EFP17_02285) | 68421..68952 | - | 532 | Protein_66 | IS3 family transposase ISBvi3 | Transposase |
| EFP17_RS02290 (EFP17_02290) | 69074..69253 | + | 180 | Protein_67 | hypothetical protein | - |
| EFP17_RS02300 (EFP17_02300) | 70212..72059 | - | 1848 | WP_012734082.1 | Clostripain | VF |
| EFP17_RS02305 | 72155..73642 | - | 1488 | WP_124837819.1 | hypothetical protein | - |
| EFP17_RS02310 (EFP17_02305) | 74341..75146 | + | 806 | WP_085962370.1 | IS5 family transposase IS1421 | Transposase |
| EFP17_RS02315 (EFP17_02310) | 75184..75987 | - | 804 | Protein_72 | IS5 family transposase | - |
| EFP17_RS02320 (EFP17_02315) | 76157..76939 | + | 783 | WP_012734080.1 | Regulatory protein AtoC | VF |
| EFP17_RS02325 (EFP17_02320) | 77159..77938 | + | 780 | WP_012734079.1 | Alkaline phosphatase synthesis transcriptional regulatory protein PhoP | VF |
| EFP17_RS02330 (EFP17_02325) | 78088..80622 | + | 2535 | WP_158335140.1 | Virulence sensor protein BvgS | VF |
| EFP17_RS02335 (EFP17_02330) | 80654..80986 | - | 333 | Protein_76 | IS3 family transposase IS1416 | Transposase |
| EFP17_RS02340 (EFP17_02335) | 81013..82569 | - | 1557 | WP_012732752.1 | IS66 family transposase ISAeh1 | Transposase |
| EFP17_RS02345 (EFP17_02340) | 82601..82951 | - | 351 | WP_012732753.1 | IS66 family transposase ISBmu30 | Transposase |
| EFP17_RS02350 (EFP17_02345) | 82927..83403 | - | 477 | WP_039203908.1 | IS66 family transposase ISRtr5 | Transposase |
| EFP17_RS02355 (EFP17_02350) | 83493..84192 | - | 700 | Protein_80 | IS3 family transposase | - |
| EFP17_RS02360 | 84292..85023 | - | 732 | WP_232252309.1 | Aerotaxis receptor | VF |
| EFP17_RS02365 | 85522..85797 | - | 276 | Protein_82 | Aerotaxis receptor | VF |
| EFP17_RS02375 | 87617..87998 | + | 382 | Protein_84 | transposase | - |
| EFP17_RS02380 (EFP17_02370) | 88325..88813 | - | 489 | WP_080569430.1 | hypothetical protein | - |
| EFP17_RS02385 (EFP17_02375) | 89032..90756 | - | 1725 | WP_012734074.1 | Methyl-accepting chemotaxis protein I | VF |
| EFP17_RS02390 (EFP17_02380) | 90933..92630 | - | 1698 | WP_012732723.1 | Methyl-accepting chemotaxis protein I | VF |
| EFP17_RS02395 | 92670..93014 | - | 345 | WP_017432531.1 | hypothetical protein | - |
| EFP17_RS02400 (EFP17_02390) | 93497..95080 | + | 1584 | WP_012732724.1 | Methyl-accepting chemotaxis protein IV | VF |
| EFP17_RS02405 (EFP17_02395) | 95204..96302 | - | 1099 | Protein_90 | tyrosine-type recombinase/integrase | - |
| EFP17_RS02410 (EFP17_02400) | 96598..97194 | - | 597 | WP_017432949.1 | HD-GYP domain-containing protein | - |
| EFP17_RS02420 (EFP17_02415) | 98514..99533 | + | 1020 | WP_045678676.1 | IS110 family transposase IS884 | Transposase |
| EFP17_RS02425 (EFP17_02420) | 99892..101187 | - | 1296 | WP_012734070.1 | aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme | - |
| EFP17_RS02430 (EFP17_02425) | 101337..101603 | + | 267 | Protein_95 | IS1182 family transposase ISThsp18 | Transposase |
| EFP17_RS02435 (EFP17_02430) | 101719..102534 | - | 816 | WP_035976812.1 | sulfotransferase | - |
| EFP17_RS02440 (EFP17_02435) | 102607..103290 | - | 684 | WP_012734068.1 | putative adenylyl-sulfate kinase | VF |
| EFP17_RS02445 (EFP17_02445) | 104080..105840 | + | 1761 | WP_012734066.1 | IS91 family transposase ISAzo26 | Transposase |
| EFP17_RS02450 (EFP17_02450) | 105880..106170 | + | 291 | WP_017425259.1 | Tn3 family transposase TnpR_ISThsp9 | Transposase |
| EFP17_RS02455 (EFP17_02455) | 106295..106966 | + | 672 | WP_012734065.1 | site-specific integrase | - |
| EFP17_RS02460 (EFP17_02460) | 107078..107326 | + | 249 | WP_012734064.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | - |
| EFP17_RS02465 (EFP17_02465) | 107320..107640 | + | 321 | WP_012734063.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| EFP17_RS02470 (EFP17_02470) | 107652..107915 | + | 264 | WP_017433216.1 | hypothetical protein | - |
| EFP17_RS02475 (EFP17_02475) | 107928..108170 | + | 243 | WP_012734062.1 | hypothetical protein | - |
| EFP17_RS02480 | 108234..108536 | + | 303 | WP_127913981.1 | hypothetical protein | - |
| EFP17_RS02485 | 108606..108800 | + | 195 | WP_124837731.1 | hypothetical protein | - |
| EFP17_RS02490 (EFP17_02485) | 109513..110559 | + | 1047 | WP_012734061.1 | IS481 family transposase IS1419 | Transposase |
| EFP17_RS02495 (EFP17_02490) | 110639..110926 | - | 288 | Protein_108 | IS21 family transposase ISBmu3 | Transposase |
| EFP17_RS02510 (EFP17_02505) | 113603..113866 | + | 264 | Protein_111 | IS481 family transposase IS1419 | Transposase |
| EFP17_RS02520 (EFP17_02520) | 115415..115834 | - | 420 | WP_012734057.1 | hypothetical protein | - |
| EFP17_RS02525 (EFP17_02525) | 116061..116912 | + | 852 | WP_012734056.1 | HTH-type transcriptional regulator NimR | VF |
| EFP17_RS02530 (EFP17_02535) | 117640..118233 | + | 594 | WP_254986640.1 | FAD-dependent monooxygenase | - |
| EFP17_RS02535 (EFP17_02540) | 118460..119697 | + | 1238 | WP_088499505.1 | IS3 family transposase IS1416 | Transposase |
| EFP17_RS02540 (EFP17_02545) | 119772..120203 | + | 432 | WP_257806590.1 | hypothetical protein | VF |
| EFP17_RS02545 | 120970..121182 | - | 213 | WP_017424862.1 | hypothetical protein | - |
| EFP17_RS02550 (EFP17_02555) | 121185..122126 | - | 942 | WP_012734053.1 | LysR substrate-binding domain-containing protein | - |
| EFP17_RS02555 (EFP17_02560) | 122208..122606 | + | 399 | WP_012734052.1 | nuclear transport factor 2 family protein | - |
| EFP17_RS02560 (EFP17_02565) | 122622..123348 | + | 727 | Protein_121 | IS6 family transposase | - |
| EFP17_RS02565 | 123476..123976 | - | 501 | WP_232252310.1 | putative signaling protein | VF |
| EFP17_RS02570 (EFP17_02575) | 124478..124954 | + | 477 | WP_012734051.1 | IS66 family transposase ISRtr5 | Transposase |
| EFP17_RS02575 (EFP17_02580) | 124930..125280 | + | 351 | WP_012732753.1 | IS66 family transposase ISBmu30 | Transposase |
| EFP17_RS02580 (EFP17_02585) | 125312..126868 | + | 1557 | WP_257806588.1 | IS66 family transposase ISAeh1 | Transposase |
| EFP17_RS02585 (EFP17_02595) | 127399..127626 | - | 228 | WP_020379863.1 | tyrosine-type recombinase/integrase | - |
| EFP17_RS02590 (EFP17_02600) | 128019..129134 | - | 1116 | WP_012734097.1 | Transcriptional regulatory protein ZraR | VF |
| EFP17_RS02595 (EFP17_02605) | 129247..129996 | - | 750 | Protein_128 | IS481 family transposase IS1419 | Transposase |
| EFP17_RS02600 (EFP17_02610) | 130083..130538 | + | 456 | WP_012732735.1 | IS66 family transposase ISRtr5 | Transposase |
| EFP17_RS02605 (EFP17_02615) | 130538..130891 | + | 354 | WP_012732734.1 | IS66 family transposase ISBmu30 | Transposase |
| EFP17_RS02610 (EFP17_02620) | 130991..132577 | + | 1587 | WP_012732733.1 | IS66 family transposase ISBmu30 | Transposase |
| EFP17_RS02615 (EFP17_02625) | 132636..132938 | - | 303 | Protein_132 | IS481 family transposase IS1419 | Transposase |
| EFP17_RS02620 (EFP17_02630) | 133840..134463 | + | 624 | WP_045678665.1 | FMN reductase | - |
| EFP17_RS02625 (EFP17_02635) | 134493..135608 | + | 1116 | WP_012734101.1 | dimethyl sulfone monooxygenase SfnG | - |
| EFP17_RS02630 (EFP17_02640) | 135764..136132 | - | 369 | Protein_135 | IS6 family transposase | - |
| EFP17_RS02635 (EFP17_02645) | 136430..137455 | - | 1026 | WP_236702755.1 | thioredoxin | - |
| EFP17_RS02640 | 137425..137667 | - | 243 | WP_236702757.1 | thioredoxin domain-containing protein | - |
| EFP17_RS02645 (EFP17_02650) | 137749..139410 | - | 1662 | WP_232252307.1 | ABC transporter ATP-binding protein/permease | - |
| EFP17_RS02650 (EFP17_02655) | 139518..139940 | - | 423 | WP_012734103.1 | biopolymer transporter ExbD | - |
| EFP17_RS02655 (EFP17_02660) | 139955..140689 | - | 735 | WP_012733849.1 | MotA/TolQ/ExbB proton channel family protein | - |
| EFP17_RS02660 (EFP17_02665) | 140713..141459 | - | 747 | WP_232252306.1 | hypothetical protein | VF |
| EFP17_RS02665 (EFP17_02670) | 141491..143866 | - | 2376 | WP_232252305.1 | TonB-dependent receptor | - |
| EFP17_RS02670 (EFP17_02675) | 144180..144644 | - | 465 | WP_012734106.1 | Lrp/AsnC family transcriptional regulator | - |
| EFP17_RS02675 | 144867..145088 | - | 222 | WP_017433768.1 | hypothetical protein | - |
| EFP17_RS02680 (EFP17_02680) | 145238..145432 | - | 195 | WP_124837685.1 | hypothetical protein | - |
| EFP17_RS02685 (EFP17_02685) | 145491..145841 | - | 351 | WP_012734107.1 | type II toxin-antitoxin system ChpB family toxin | Toxin Detail |
| EFP17_RS02690 (EFP17_02690) | 145835..146086 | - | 252 | WP_012734108.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| EFP17_RS02695 (EFP17_02695) | 146349..146756 | - | 408 | WP_230674618.1 | hypothetical protein | - |
| EFP17_RS02700 (EFP17_02700) | 146859..148694 | - | 1836 | WP_012732711.1 | site-specific integrase | - |
| EFP17_RS02705 (EFP17_02705) | 148697..149038 | - | 342 | WP_012732710.1 | hypothetical protein | - |
| EFP17_RS02710 (EFP17_02710) | 149095..149340 | - | 246 | WP_127913916.1 | hypothetical protein | - |
| EFP17_RS02715 | 149337..149579 | - | 243 | WP_124837682.1 | hypothetical protein | - |
| EFP17_RS02720 (EFP17_02720) | 149593..149877 | - | 285 | WP_017432347.1 | hypothetical protein | - |
| EFP17_RS02725 (EFP17_02725) | 150284..150772 | - | 489 | WP_012732893.1 | GNAT family N-acetyltransferase | - |
| EFP17_RS02730 (EFP17_02730) | 150769..151038 | - | 270 | WP_012732894.1 | DUF1778 domain-containing protein | - |
| EFP17_RS02735 (EFP17_02735) | 151245..151430 | - | 186 | WP_017432348.1 | hypothetical protein | - |
| EFP17_RS02740 | 151915..152517 | + | 603 | WP_127913917.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|