MGE detailed information
MGE type: Genomic_island MGE length: 74420 bp
Accession: NZ_CP033635 Location: 4481599..4556018 Organism: Escherichia coli isolate ECCNB12-2 Replicon: chromosome
Accession: NZ_CP033635 Location: 4481599..4556018 Organism: Escherichia coli isolate ECCNB12-2 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CQP61_RS24850 () | 4476970..4478154 | + | 1185 | WP_001218742.1 | tyrosine-type recombinase/integrase | - |
| CQP61_RS24855 () | 4478304..4479314 | + | 1011 | WP_000053331.1 | substrate-binding domain-containing protein | - |
| CQP61_RS24860 () | 4479410..4481536 | + | 2127 | WP_000253907.1 | alpha-galactosidase | - |
| CQP61_RS24865 () | 4481599..4482876 | + | 1278 | WP_121831896.1 | MFS transporter | - |
| CQP61_RS24870 () | 4482873..4484306 | + | 1434 | WP_024144973.1 | glycoside hydrolase family 32 protein | - |
| CQP61_RS24875 () | 4484501..4485895 | + | 1395 | WP_001037798.1 | carbohydrate porin | - |
| CQP61_RS31580 () | 4486473..4486760 | - | 288 | Protein_4296 | integrase core domain-containing protein | - |
| CQP61_RS24885 () | 4486749..4487110 | - | 362 | Protein_4297 | IS1 family transposase | - |
| CQP61_RS24890 () | 4487160..4488194 | + | 1035 | WP_032153697.1 | tetratricopeptide repeat family protein | - |
| CQP61_RS24895 () | 4488338..4490011 | - | 1674 | WP_025492097.1 | phosphoethanolamine transferase | - |
| CQP61_RS24905 () | 4490064..4490261 | - | 198 | WP_001238004.1 | hypothetical protein | - |
| CQP61_RS24910 () | 4490401..4490667 | - | 267 | WP_000766274.1 | YkgJ family cysteine cluster protein | - |
| CQP61_RS24915 () | 4490664..4492235 | - | 1572 | WP_001100182.1 | ATP--cob(I)alamin adenosyltransferase | - |
| CQP61_RS24920 () | 4492282..4493361 | - | 1080 | WP_001207396.1 | hypothetical protein | - |
| CQP61_RS24925 () | 4493410..4494306 | - | 897 | WP_000228490.1 | WYL domain-containing protein | - |
| CQP61_RS24930 () | 4494726..4495463 | - | 738 | WP_001398114.1 | porin family protein | - |
| CQP61_RS24935 () | 4495642..4495871 | + | 230 | Protein_4306 | integrase | - |
| CQP61_RS24940 () | 4496094..4496990 | - | 897 | WP_000499115.1 | hypothetical protein | - |
| CQP61_RS24945 () | 4496990..4498612 | - | 1623 | WP_000778955.1 | AAA family ATPase | - |
| CQP61_RS24950 () | 4498621..4499763 | - | 1143 | WP_000742120.1 | restriction endonuclease subunit S | - |
| CQP61_RS24955 () | 4499760..4501394 | - | 1635 | WP_000627728.1 | type I restriction-modification system subunit M | - |
| CQP61_RS24960 () | 4501458..4504871 | - | 3414 | WP_000438165.1 | DEAD/DEAH box helicase family protein | - |
| CQP61_RS24970 () | 4505479..4505993 | + | 515 | Protein_4312 | transposase | - |
| CQP61_RS24975 () | 4506293..4506559 | - | 267 | WP_032153698.1 | MazG-like family protein | - |
| CQP61_RS24985 () | 4507026..4508108 | + | 1083 | WP_000637419.1 | XRE family transcriptional regulator | - |
| CQP61_RS24990 () | 4508111..4509055 | - | 945 | WP_000820616.1 | hypothetical protein | - |
| CQP61_RS24995 () | 4509052..4510032 | - | 981 | WP_000174035.1 | thymidylate synthase | - |
| CQP61_RS25000 () | 4510200..4511361 | + | 1162 | Protein_4317 | IS3 family transposase | - |
| CQP61_RS25005 () | 4511512..4512744 | + | 1233 | WP_000271619.1 | dNTP triphosphohydrolase | - |
| CQP61_RS25015 () | 4513195..4513458 | - | 264 | Protein_4319 | P fimbria major subunit PapA | - |
| CQP61_RS25020 () | 4513665..4513979 | - | 315 | WP_000930062.1 | major pilus subunit operon regulatory protein PapB | - |
| CQP61_RS25035 () | 4514402..4514680 | + | 279 | WP_001349530.1 | FaeA/PapI family transcriptional regulator | - |
| CQP61_RS25040 () | 4514614..4515270 | + | 657 | Protein_4322 | IS91-like element ISVsa3 family transposase | - |
| CQP61_RS31790 () | 4515739..4516185 | + | 447 | Protein_4323 | DUF3363 domain-containing protein | - |
| CQP61_RS25050 () | 4516402..4517616 | + | 1215 | WP_023300759.1 | chloramphenicol/florfenicol efflux MFS transporter FloR | - |
| CQP61_RS25055 () | 4517644..4517949 | + | 306 | WP_001255015.1 | LysR family transcriptional regulator | - |
| CQP61_RS25060 () | 4518061..4518249 | + | 189 | Protein_4326 | IS91 family transposase | - |
| CQP61_RS25065 () | 4518216..4519415 | - | 1200 | WP_032153701.1 | tetracycline efflux MFS transporter Tet(A) | - |
| CQP61_RS25070 () | 4519521..4520171 | + | 651 | WP_001493764.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| CQP61_RS25075 () | 4520203..4520445 | - | 243 | WP_000844627.1 | transposase | - |
| CQP61_RS25085 () | 4520751..4521587 | - | 837 | WP_000480968.1 | aminoglycoside O-phosphotransferase APH(6)-Id | - |
| CQP61_RS25090 () | 4521587..4522390 | - | 804 | WP_001082319.1 | aminoglycoside O-phosphotransferase APH(3'')-Ib | - |
| CQP61_RS25095 () | 4522451..4523266 | - | 816 | WP_001043260.1 | sulfonamide-resistant dihydropteroate synthase Sul2 | - |
| CQP61_RS25105 () | 4523507..4524073 | - | 567 | WP_000919994.1 | hypothetical protein | - |
| CQP61_RS25120 () | 4524924..4525037 | - | 114 | WP_131501864.1 | transposase | - |
| CQP61_RS25125 () | 4525300..4525476 | - | 177 | Protein_4335 | transketolase family protein | - |
| CQP61_RS25130 () | 4525536..4526227 | + | 692 | Protein_4336 | IS1 family transposase | - |
| CQP61_RS31795 () | 4526630..4526821 | + | 192 | WP_001323513.1 | hypothetical protein | - |
| CQP61_RS31800 () | 4526890..4527138 | + | 249 | WP_001349534.1 | osmoprotectant transport activator ProQ | - |
| CQP61_RS25150 () | 4527157..4527705 | - | 549 | WP_032153702.1 | hypothetical protein | - |
| CQP61_RS25160 () | 4527974..4528210 | - | 237 | WP_000958154.1 | AlpA family transcriptional regulator | - |
| CQP61_RS25165 () | 4528279..4528851 | - | 573 | WP_032153703.1 | hypothetical protein | - |
| CQP61_RS31590 () | 4528866..4529015 | + | 150 | WP_001421645.1 | hypothetical protein | - |
| CQP61_RS25170 () | 4529135..4529701 | - | 567 | WP_032153705.1 | inovirus-type Gp2 protein | - |
| CQP61_RS25175 () | 4531297..4532901 | - | 1605 | WP_001067608.1 | DUF3987 domain-containing protein | - |
| CQP61_RS25180 () | 4533335..4533992 | + | 658 | Protein_4345 | transposase | - |
| CQP61_RS25185 () | 4534086..4534817 | - | 732 | WP_032153707.1 | inovirus Gp2 family protein | - |
| CQP61_RS25200 () | 4536568..4537377 | + | 810 | WP_032153709.1 | hypothetical protein | - |
| CQP61_RS25205 () | 4537374..4538306 | - | 933 | WP_023155730.1 | hypothetical protein | - |
| CQP61_RS25210 () | 4538413..4539297 | + | 885 | WP_024166630.1 | 50S ribosome-binding GTPase | - |
| CQP61_RS25215 () | 4539416..4540093 | + | 678 | WP_023155728.1 | hypothetical protein | - |
| CQP61_RS25220 () | 4540123..4540332 | + | 210 | WP_023155727.1 | DUF905 family protein | - |
| CQP61_RS25225 () | 4540423..4541241 | + | 819 | WP_001234693.1 | DUF945 domain-containing protein | - |
| CQP61_RS25230 () | 4541333..4541818 | + | 486 | WP_032153711.1 | antirestriction protein | - |
| CQP61_RS25235 () | 4541834..4542310 | + | 477 | WP_001186715.1 | RadC family protein | - |
| CQP61_RS25240 () | 4542379..4542600 | + | 222 | WP_000692345.1 | DUF987 domain-containing protein | - |
| CQP61_RS25245 () | 4542680..4543054 | + | 375 | WP_032153712.1 | type IV toxin-antitoxin system toxin CbtA | Antitoxin Detail |
| CQP61_RS25250 () | 4543101..4543478 | + | 378 | WP_000854735.1 | TA system toxin CbtA family protein | Toxin Detail |
| CQP61_RS25255 () | 4543475..4543966 | + | 492 | WP_023155722.1 | hypothetical protein | - |
| CQP61_RS25260 () | 4543978..4544175 | + | 198 | WP_000839265.1 | DUF957 domain-containing protein | - |
| CQP61_RS25265 () | 4544260..4545126 | + | 867 | WP_032153714.1 | DUF4942 domain-containing protein | - |
| CQP61_RS25270 () | 4545198..4545461 | + | 264 | WP_025492088.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| CQP61_RS25275 () | 4545458..4545784 | + | 327 | WP_000779483.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| CQP61_RS25280 () | 4546667..4548205 | + | 1539 | WP_001187186.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| CQP61_RS25285 () | 4548571..4549905 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| CQP61_RS25290 () | 4549985..4552132 | + | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| CQP61_RS25295 () | 4552191..4553648 | + | 1458 | WP_000856843.1 | dipeptide/tripeptide permease DtpC | - |
| CQP61_RS25300 () | 4553885..4555402 | + | 1518 | WP_000003799.1 | lysine--tRNA ligase | - |
| CQP61_RS25305 () | 4555521..4555694 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| CQP61_RS25310 () | 4555722..4556018 | - | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| CQP61_RS25315 () | 4556246..4556518 | - | 273 | WP_000405647.1 | N-acetyltransferase | - |
| CQP61_RS25320 () | 4556530..4556760 | - | 231 | WP_000371713.1 | (4Fe-4S)-binding protein | - |
| CQP61_RS25325 () | 4556941..4558572 | + | 1632 | WP_001216471.1 | sensor histidine kinase | - |
| CQP61_RS25330 () | 4558569..4559288 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|