MGE detailed information
MGE type: IScluster/Tn MGE length: 59968 bp
Accession: NZ_CP033511 Location: 159749..219716 Organism: Shigella flexneri strain 2016AM-0877 Replicon: plasmid p2016AM-0877
Accession: NZ_CP033511 Location: 159749..219716 Organism: Shigella flexneri strain 2016AM-0877 Replicon: plasmid p2016AM-0877
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EEL47_RS25175 (EEL47_25215) | 155820..156800 | + | 981 | WP_000431558.1 | ParB family protein | - |
| EEL47_RS25180 (EEL47_25220) | 157056..157541 | + | 486 | WP_000003223.1 | IS110 family transposase | - |
| EEL47_RS25185 (EEL47_25225) | 157568..157747 | - | 180 | Protein_195 | transposase domain-containing protein | - |
| EEL47_RS25190 (EEL47_25230) | 157830..158957 | - | 1128 | WP_014526552.1 | group II intron reverse transcriptase/maturase | - |
| EEL47_RS26595 | 158879..159217 | + | 339 | WP_227804374.1 | hypothetical protein | - |
| EEL47_RS25200 (EEL47_25240) | 159533..159712 | - | 180 | Protein_198 | IS66 family transposase | - |
| EEL47_RS25205 (EEL47_25245) | 159749..160958 | - | 1210 | Protein_199 | IS3 family transposase | - |
| EEL47_RS25210 (EEL47_25250) | 161015..161311 | - | 297 | Protein_200 | DDE-type integrase/transposase/recombinase | - |
| EEL47_RS25215 (EEL47_25255) | 161427..161615 | + | 189 | WP_000957853.1 | hypothetical protein | - |
| EEL47_RS25220 (EEL47_25260) | 161625..162824 | + | 1200 | WP_000947175.1 | IS91 family transposase ISSbo1 | Transposase |
| EEL47_RS25225 (EEL47_25265) | 162997..163751 | - | 755 | Protein_203 | IS3 family transposase IS150 | Transposase |
| EEL47_RS25230 (EEL47_25270) | 163762..164121 | + | 360 | Protein_204 | IS21 family transposase IS100 | Transposase |
| EEL47_RS25235 (EEL47_25275) | 164114..164902 | - | 789 | WP_005116773.1 | AraC family invasion system transcriptional regulator VirF | - |
| EEL47_RS25240 (EEL47_25280) | 165331..165732 | + | 402 | Protein_206 | integrase core domain-containing protein | - |
| EEL47_RS25245 (EEL47_25285) | 165914..166180 | + | 267 | WP_000957712.1 | hypothetical protein | VF |
| EEL47_RS25250 (EEL47_25290) | 166370..167067 | + | 698 | WP_227804301.1 | IS1 family transposase IS1X2 | Transposase |
| EEL47_RS25255 (EEL47_25295) | 167328..168524 | - | 1197 | WP_005085088.1 | IS110 family transposase ISSfl4 | Transposase |
| EEL47_RS25260 (EEL47_25300) | 168860..170551 | + | 1692 | WP_134800253.1 | putative E3 ubiquitin-protein ligase ipaH7.8 | VF |
| EEL47_RS25265 (EEL47_25305) | 170603..171811 | + | 1209 | Protein_211 | IS3 family transposase | - |
| EEL47_RS25270 (EEL47_25310) | 171854..172377 | - | 524 | Protein_212 | IS3 family transposase ISSfl11 | Transposase |
| EEL47_RS25275 (EEL47_25315) | 172445..172927 | - | 483 | WP_000405245.1 | GNAT family N-acetyltransferase | Toxin Detail |
| EEL47_RS25280 (EEL47_25320) | 172918..173220 | - | 303 | WP_010921625.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| EEL47_RS25290 (EEL47_25330) | 173492..173764 | + | 273 | WP_000019158.1 | hypothetical protein | - |
| EEL47_RS25295 (EEL47_25335) | 173745..174952 | + | 1208 | WP_094085525.1 | IS91 family transposase ISSbo1 | Transposase |
| EEL47_RS25920 | 175124..175252 | + | 129 | Protein_217 | IS5/IS1182 family transposase | - |
| EEL47_RS25310 (EEL47_25350) | 175401..176855 | - | 1455 | WP_000701108.1 | hypothetical protein | VF |
| EEL47_RS25315 (EEL47_25355) | 177259..177878 | + | 620 | Protein_219 | IS1 family transposase IS1X2 | Transposase |
| EEL47_RS25320 (EEL47_25360) | 177928..179137 | + | 1210 | Protein_220 | IS3 family transposase | - |
| EEL47_RS25325 (EEL47_25365) | 179181..179591 | + | 411 | Protein_221 | IS66 family transposase ISEc23 | Transposase |
| EEL47_RS25330 (EEL47_25370) | 179623..180237 | + | 615 | Protein_222 | IS21 family transposase ISEc10 | Transposase |
| EEL47_RS25335 (EEL47_25375) | 180406..184500 | - | 4095 | WP_134800254.1 | Serine protease SepA autotransporter | VF |
| EEL47_RS25345 (EEL47_25385) | 184902..185090 | + | 189 | WP_000957853.1 | hypothetical protein | - |
| EEL47_RS25350 (EEL47_25390) | 185100..186298 | + | 1199 | WP_094081567.1 | IS91 family transposase ISSbo1 | Transposase |
| EEL47_RS25355 (EEL47_25395) | 186674..187408 | - | 735 | Protein_226 | IS21 family transposase IS100kyp | Transposase |
| EEL47_RS25365 (EEL47_25405) | 187588..188796 | + | 1209 | Protein_227 | IS3 family transposase | - |
| EEL47_RS25375 (EEL47_25415) | 188899..189396 | + | 498 | Protein_228 | IS66 family transposase ISEc47 | Transposase |
| EEL47_RS25380 (EEL47_25420) | 189437..189628 | + | 192 | Protein_229 | IS21 family transposase IS100 | Transposase |
| EEL47_RS25385 (EEL47_25425) | 189722..189931 | - | 210 | Protein_230 | peptidoglycan-binding protein | - |
| EEL47_RS25390 (EEL47_25430) | 189981..191345 | - | 1365 | WP_000051931.1 | MFS transporter | - |
| EEL47_RS25395 (EEL47_25435) | 191543..191818 | - | 276 | WP_227804373.1 | S-type pyocin domain-containing protein | - |
| EEL47_RS25925 | 192093..192305 | + | 213 | Protein_233 | DDE-type integrase/transposase/recombinase | - |
| EEL47_RS25405 (EEL47_25445) | 192349..193557 | - | 1209 | Protein_234 | IS3 family transposase | - |
| EEL47_RS25410 (EEL47_25450) | 193609..195333 | - | 1725 | WP_010921638.1 | putative E3 ubiquitin-protein ligase ipaH4.5 | VF |
| EEL47_RS25415 (EEL47_25455) | 195761..197458 | - | 1698 | WP_064203851.1 | putative E3 ubiquitin-protein ligase ipaH7.8 | VF |
| EEL47_RS25420 (EEL47_25460) | 197787..197966 | + | 180 | Protein_237 | transposase | - |
| EEL47_RS25425 (EEL47_25465) | 197983..198673 | - | 691 | Protein_238 | IS1 family transposase | - |
| EEL47_RS25430 (EEL47_25470) | 198867..199898 | - | 1032 | WP_004998488.1 | IS630 family transposase IS630 | Transposase |
| EEL47_RS25450 (EEL47_25490) | 202222..202494 | - | 273 | WP_000019158.1 | hypothetical protein | - |
| EEL47_RS25460 (EEL47_25500) | 202661..202780 | - | 120 | Protein_243 | IS66 family insertion sequence element accessory protein TnpB | - |
| EEL47_RS25470 (EEL47_25505) | 202897..204594 | - | 1698 | WP_024259347.1 | hypothetical protein | VF |
| EEL47_RS25475 (EEL47_25510) | 204670..204819 | + | 150 | Protein_245 | IS1 family transposase | - |
| EEL47_RS25480 (EEL47_25515) | 204923..206335 | - | 1413 | WP_001026857.1 | hypothetical protein | VF |
| EEL47_RS25485 (EEL47_25520) | 206785..206847 | + | 63 | Protein_247 | IS66 family transposase ISCro1 | Transposase |
| EEL47_RS25490 (EEL47_25525) | 206868..207089 | - | 222 | Protein_248 | IS66 family transposase ISCro1 | Transposase |
| EEL47_RS25495 (EEL47_25530) | 207232..207425 | - | 194 | Protein_249 | HNH endonuclease | - |
| EEL47_RS25505 (EEL47_25540) | 208629..209102 | - | 474 | WP_005038443.1 | CFA/I fimbrial subunit D | VF |
| EEL47_RS25510 (EEL47_25545) | 209353..210549 | + | 1197 | WP_005085088.1 | IS110 family transposase ISSfl4 | Transposase |
| EEL47_RS25515 | 210544..210968 | - | 425 | Protein_253 | hypothetical protein | - |
| EEL47_RS25520 (EEL47_25550) | 211196..211834 | - | 639 | WP_000502854.1 | ParB N-terminal domain-containing protein | - |
| EEL47_RS25525 (EEL47_25555) | 211819..211962 | - | 144 | Protein_255 | DUF3440 domain-containing protein | - |
| EEL47_RS25540 (EEL47_25570) | 214566..214847 | + | 282 | Protein_258 | IS4 family transposase ISSfl1 | Transposase |
| EEL47_RS25545 (EEL47_25575) | 215020..215505 | - | 486 | WP_000501974.1 | GNAT family N-acetyltransferase | Toxin Detail |
| EEL47_RS25550 (EEL47_25580) | 215493..215777 | - | 285 | WP_011114751.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| EEL47_RS25930 | 216679..216843 | + | 165 | WP_001346193.1 | hypothetical protein | - |
| EEL47_RS25575 (EEL47_25605) | 217097..218698 | - | 1602 | WP_005063916.1 | IS66 family transposase ISSfl3 | Transposase |
| EEL47_RS25580 (EEL47_25610) | 218695..219045 | - | 351 | WP_005048975.1 | IS66 family transposase ISSfl3 | Transposase |
| EEL47_RS25585 (EEL47_25615) | 219042..219716 | - | 675 | WP_004967157.1 | IS66 family transposase ISSfl3 | Transposase |
| EEL47_RS25590 (EEL47_25620) | 220288..221742 | + | 1455 | WP_015683184.1 | type 3 secretion system effector OspC4 | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|