MGE detailed information
MGE type: Prophage MGE length: 75669 bp
Accession: NZ_CP033510 Location: 3218095..3293763 Organism: Shigella flexneri strain 2016AM-0877 Replicon: chromosome
Accession: NZ_CP033510 Location: 3218095..3293763 Organism: Shigella flexneri strain 2016AM-0877 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EEL47_RS16195 (3214561) | 3214561..3215838 | + | 1278 | WP_001099191.1 | MFS transporter | - |
| EEL47_RS16200 (3215835) | 3215835..3217265 | + | 1431 | WP_000813683.1 | glycoside hydrolase family 32 protein | - |
| EEL47_RS16205 (3217329) | 3217329..3217844 | + | 516 | WP_000523728.1 | PTS glucose transporter subunit IIA | - |
| EEL47_RS16215 (3218095) | 3218095..3218834 | + | 740 | Protein_3085 | IS3 family transposase IS629 | Transposase |
| EEL47_RS16225 (3219507) | 3219507..3220969 | + | 1463 | Protein_3086 | reverse transcriptase domain-containing protein | - |
| EEL47_RS16230 (3221050) | 3221050..3221508 | + | 459 | Protein_3087 | IS3 family transposase ISEc14 | Transposase |
| EEL47_RS16235 (3221729) | 3221729..3227464 | - | 5736 | WP_000108720.1 | DUF4011 domain-containing protein | - |
| EEL47_RS16240 (3227523) | 3227523..3228568 | + | 1046 | Protein_3089 | IS3 family transposase IS1203 | Transposase |
| EEL47_RS16245 (3228627) | 3228627..3229649 | + | 1023 | WP_000255944.1 | IS21 family transposase IS100kyp | Transposase |
| EEL47_RS16250 (3229646) | 3229646..3230428 | + | 783 | WP_001300609.1 | IS21 family transposase IS100kyp | Transposase |
| EEL47_RS16255 (3230486) | 3230486..3230695 | + | 210 | Protein_3092 | integrase core domain-containing protein | - |
| EEL47_RS16260 (3230923) | 3230923..3232965 | - | 2043 | WP_000995975.1 | DUF262 domain-containing protein | - |
| EEL47_RS16265 (3232958) | 3232958..3234409 | - | 1452 | WP_000443938.1 | DUF262 domain-containing protein | - |
| EEL47_RS16270 (3234434) | 3234434..3234856 | - | 423 | Protein_3095 | IS3 family transposase ISLad1 | Transposase |
| EEL47_RS16275 (3234805) | 3234805..3235143 | - | 339 | WP_000090302.1 | hypothetical protein | - |
| EEL47_RS16280 (3235133) | 3235133..3235985 | - | 853 | Protein_3097 | SAM-dependent methyltransferase | - |
| EEL47_RS16285 (3235956) | 3235956..3236888 | + | 933 | Protein_3098 | IS5 family transposase ISKpn26 | Transposase |
| EEL47_RS16290 (3237036) | 3237036..3240152 | - | 3117 | WP_000149676.1 | HsdR family type I site-specific deoxyribonuclease | - |
| EEL47_RS16295 (3240274) | 3240274..3241500 | - | 1227 | WP_050019106.1 | restriction endonuclease subunit S | - |
| EEL47_RS16300 (3241497) | 3241497..3243053 | - | 1557 | WP_000200813.1 | type I restriction-modification system subunit M | - |
| EEL47_RS16305 (3243317) | 3243317..3244189 | + | 873 | WP_070751363.1 | GTPase family protein | - |
| EEL47_RS16310 (3244562) | 3244562..3247408 | + | 2847 | WP_134800236.1 | Ag43/Cah family autotransporter adhesin | - |
| EEL47_RS16315 (3247479) | 3247479..3247674 | + | 196 | Protein_3104 | DUF905 family protein | - |
| EEL47_RS16325 (3247792) | 3247792..3248610 | + | 819 | WP_134800237.1 | DUF932 domain-containing protein | - |
| EEL47_RS16330 (3248610) | 3248610..3248855 | + | 246 | WP_000680584.1 | hypothetical protein | - |
| EEL47_RS16335 (3248949) | 3248949..3249428 | + | 480 | WP_000706976.1 | antirestriction protein | - |
| EEL47_RS16340 (3249442) | 3249442..3249918 | + | 477 | WP_001186742.1 | RadC family protein | - |
| EEL47_RS16345 (3249987) | 3249987..3250208 | + | 222 | WP_000692353.1 | DUF987 domain-containing protein | - |
| EEL47_RS16350 (3250223) | 3250223..3250867 | + | 645 | Protein_3110 | antitoxin of toxin-antitoxin stability system | - |
| EEL47_RS16355 (3250917) | 3250917..3251285 | + | 369 | WP_070749977.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| EEL47_RS16360 (3251375) | 3251375..3251752 | + | 378 | WP_000854726.1 | TA system toxin CbtA family protein | Toxin Detail |
| EEL47_RS26365 (3251749) | 3251749..3251832 | + | 84 | Protein_3113 | DUF5983 family protein | - |
| EEL47_RS16365 (3251917) | 3251917..3252663 | - | 747 | WP_001016257.1 | IS21 family transposase ISEc12 | Transposase |
| EEL47_RS16370 (3252678) | 3252678..3254219 | - | 1542 | WP_001298859.1 | IS21 family transposase ISEc12 | Transposase |
| EEL47_RS16375 (3254413) | 3254413..3254823 | + | 411 | Protein_3116 | DUF5983 family protein | - |
| EEL47_RS16380 (3254835) | 3254835..3255032 | + | 198 | WP_000839267.1 | DUF957 domain-containing protein | - |
| EEL47_RS16385 (3255117) | 3255117..3255965 | + | 849 | WP_001280510.1 | DUF4942 domain-containing protein | - |
| EEL47_RS16390 (3256058) | 3256058..3257377 | - | 1320 | WP_000144692.1 | Prophage integrase IntA ; Integrase | Integrase |
| EEL47_RS16395 (3257603) | 3257603..3258061 | - | 459 | Protein_3120 | site-specific integrase | - |
| EEL47_RS16405 (3259316) | 3259316..3259987 | - | 672 | Protein_3122 | hypothetical protein ; Integrase | Integrase |
| EEL47_RS26370 (3259909) | 3259909..3260259 | - | 351 | WP_000433939.1 | helix-turn-helix domain-containing protein | - |
| EEL47_RS16415 (3260259) | 3260259..3260564 | - | 306 | WP_000206732.1 | protein YfdT | - |
| EEL47_RS16420 (3260564) | 3260564..3260923 | - | 360 | WP_000563002.1 | hypothetical protein | - |
| EEL47_RS16425 (3260907) | 3260907..3262116 | - | 1210 | Protein_3126 | IS3 family transposase IS629 | Transposase |
| EEL47_RS16430 (3262279) | 3262279..3263435 | + | 1157 | WP_094081492.1 | IS3 family transposase ISSd1 | Transposase |
| EEL47_RS16435 (3263481) | 3263481..3263837 | + | 357 | Protein_3128 | integrase | - |
| EEL47_RS16440 (3264099) | 3264099..3264461 | + | 363 | WP_000915845.1 | Prophage bactoprenol-linked glucose translocase | VF |
| EEL47_RS16445 (3264458) | 3264458..3265387 | + | 930 | WP_000703655.1 | Prophage bactoprenol glucosyl transferase | VF |
| EEL47_RS16450 (3265384) | 3265384..3266844 | + | 1461 | WP_000590789.1 | hypothetical protein | VF |
| EEL47_RS16455 (3267234) | 3267234..3268424 | - | 1191 | WP_001111520.1 | IS4 family transposase ISSfl9 | Transposase |
| EEL47_RS16460 (3268875) | 3268875..3269924 | + | 1050 | WP_000282635.1 | acyltransferase family protein | - |
| EEL47_RS16465 (3270697) | 3270697..3271131 | - | 435 | WP_001223322.1 | tail fiber assembly protein | - |
| EEL47_RS16470 (3271103) | 3271103..3271753 | - | 651 | WP_000554647.1 | hypothetical protein | - |
| EEL47_RS16485 (3273148) | 3273148..3274311 | + | 1164 | WP_000051894.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| EEL47_RS16490 (3274660) | 3274660..3275832 | + | 1173 | WP_000551008.1 | acyltransferase | - |
| EEL47_RS16495 (3275886) | 3275886..3276509 | - | 624 | WP_069101164.1 | phage tail protein | - |
| EEL47_RS16505 (3277818) | 3277818..3278297 | - | 480 | Protein_3141 | IS3 family transposase IS629 | Transposase |
| EEL47_RS16510 (3278381) | 3278381..3279889 | - | 1509 | WP_001189111.1 | group II intron reverse transcriptase/maturase | - |
| EEL47_RS16520 (3280562) | 3280562..3281297 | - | 736 | Protein_3143 | IS3 family transposase | - |
| EEL47_RS16525 (3281448) | 3281448..3282563 | + | 1116 | WP_005053118.1 | diguanylate cyclase AdrA | - |
| EEL47_RS16530 (3282580) | 3282580..3283389 | - | 810 | WP_001295331.1 | pyrroline-5-carboxylate reductase | - |
| EEL47_RS16535 (3283509) | 3283509..3283967 | + | 459 | WP_000158164.1 | YaiI/YqxD family protein | - |
| EEL47_RS16540 (3284150) | 3284150..3284674 | + | 525 | WP_000193385.1 | shikimate kinase AroL | - |
| EEL47_RS16545 (3284724) | 3284724..3284915 | + | 192 | WP_001142439.1 | protein YaiA | - |
| EEL47_RS16550 (3285173) | 3285173..3285850 | + | 678 | WP_001276420.1 | AroM family protein | - |
| EEL47_RS16555 (3285922) | 3285922..3286206 | + | 285 | WP_000941942.1 | pyrimidine/purine nucleoside phosphorylase | - |
| EEL47_RS16560 (3286361) | 3286361..3286696 | + | 336 | Protein_3151 | DUF2773 domain-containing protein | - |
| EEL47_RS16565 (3286693) | 3286693..3287148 | + | 456 | WP_000194195.1 | hypothetical protein | - |
| EEL47_RS16570 (3287226) | 3287226..3288137 | - | 912 | WP_005053105.1 | recombination-associated protein RdgC | - |
| EEL47_RS16575 (3288262) | 3288262..3289170 | + | 909 | WP_001219335.1 | fructokinase | - |
| EEL47_RS16580 (3289313) | 3289313..3290494 | - | 1182 | WP_005053102.1 | MFS transporter AraJ | - |
| EEL47_RS16585 (3290620) | 3290620..3293763 | - | 3144 | WP_000698943.1 | exonuclease subunit SbcC | - |
| EEL47_RS16590 (3293760) | 3293760..3294962 | - | 1203 | WP_001221306.1 | exonuclease subunit SbcD | - |
| EEL47_RS16595 (3295152) | 3295152..3295841 | + | 690 | WP_000113938.1 | phosphate response regulator transcription factor PhoB | - |
| EEL47_RS16600 (3295899) | 3295899..3297194 | + | 1296 | WP_000893611.1 | phosphate regulon sensor histidine kinase PhoR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|