MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 90355 bp
Accession: NZ_CP033439 Location: 1065389..1155743 Organism: Pseudomonas aeruginosa strain SP4528 Replicon: chromosome
Accession: NZ_CP033439 Location: 1065389..1155743 Organism: Pseudomonas aeruginosa strain SP4528 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D8668_RS04825 () | 1060547..1061509 | + | 963 | WP_003094686.1 | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | - |
| D8668_RS04830 () | 1061506..1062234 | + | 729 | WP_033991129.1 | peptidoglycan editing factor PgeF | - |
| D8668_RS04835 () | 1062390..1064954 | + | 2565 | WP_003094682.1 | ATP-dependent chaperone ClpB | - |
| D8668_RS04855 () | 1065773..1067074 | - | 1302 | WP_003454526.1 | Recombination-promoting nuclease RpnA ; Integrase | Integrase |
| D8668_RS04860 () | 1067071..1068993 | - | 1923 | WP_022580137.1 | helicase/relaxase domain-containing protein | - |
| D8668_RS04865 () | 1069153..1070403 | - | 1251 | WP_003119430.1 | IS256 family transposase ISRso7 | Transposase |
| D8668_RS04870 () | 1070787..1071026 | + | 240 | WP_023082682.1 | hypothetical protein | - |
| D8668_RS04875 () | 1071052..1071969 | + | 918 | WP_023082681.1 | hypothetical protein | - |
| D8668_RS04880 () | 1071979..1072338 | - | 360 | WP_012076884.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| D8668_RS04885 () | 1072342..1072614 | - | 273 | WP_022580142.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| D8668_RS04890 () | 1072733..1073086 | + | 354 | WP_022580143.1 | hypothetical protein | - |
| D8668_RS04895 () | 1073117..1074652 | - | 1536 | WP_108720489.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| D8668_RS04900 () | 1074649..1074993 | - | 345 | WP_003456714.1 | hypothetical protein | - |
| D8668_RS04905 () | 1074993..1076381 | - | 1389 | WP_023108760.1 | integrating conjugative element protein | - |
| D8668_RS04910 () | 1076399..1077337 | - | 939 | WP_003456709.1 | TIGR03756 family integrating conjugative element protein | - |
| D8668_RS04915 () | 1077337..1077768 | - | 432 | WP_003456706.1 | TIGR03757 family integrating conjugative element protein | - |
| D8668_RS04930 () | 1079907..1080125 | + | 219 | WP_003158150.1 | hypothetical protein | - |
| D8668_RS04935 () | 1080122..1080781 | - | 660 | WP_022579649.1 | DsbA family protein | - |
| D8668_RS04940 () | 1080778..1081062 | - | 285 | WP_003086159.1 | hypothetical protein | - |
| D8668_RS04945 () | 1081059..1084001 | - | 2943 | WP_033989541.1 | conjugative transfer ATPase | - |
| D8668_RS04950 () | 1084001..1084444 | - | 444 | WP_003121022.1 | TIGR03751 family conjugal transfer lipoprotein | - |
| D8668_RS04955 () | 1084422..1085927 | - | 1506 | WP_003121021.1 | TIGR03752 family integrating conjugative element protein | - |
| D8668_RS04960 () | 1085911..1086795 | - | 885 | WP_003121020.1 | TIGR03749 family integrating conjugative element protein | - |
| D8668_RS04965 () | 1086792..1087451 | - | 660 | WP_003117079.1 | TIGR03746 family integrating conjugative element protein | - |
| D8668_RS04970 () | 1087448..1087834 | - | 387 | WP_003117078.1 | TIGR03750 family conjugal transfer protein | - |
| D8668_RS04975 () | 1087845..1088201 | - | 357 | WP_003117077.1 | TIGR03745 family integrating conjugative element membrane protein | - |
| D8668_RS04980 () | 1088219..1088458 | - | 240 | WP_003121019.1 | TIGR03758 family integrating conjugative element protein | - |
| D8668_RS04985 () | 1088455..1088793 | - | 339 | WP_033989538.1 | RAQPRD family integrative conjugative element protein | - |
| D8668_RS04990 () | 1088886..1089191 | - | 306 | WP_022579645.1 | hypothetical protein | - |
| D8668_RS04995 () | 1089299..1090780 | - | 1482 | WP_022579644.1 | UvrD-helicase domain-containing protein | - |
| D8668_RS05000 () | 1091021..1091512 | - | 492 | WP_023111001.1 | hypothetical protein | - |
| D8668_RS05005 () | 1091530..1092276 | - | 747 | WP_022579642.1 | TIGR03747 family integrating conjugative element membrane protein | - |
| D8668_RS05010 () | 1092276..1094507 | - | 2232 | WP_022579641.1 | type IV conjugative transfer system coupling protein TraD | - |
| D8668_RS05015 () | 1094511..1094717 | - | 207 | WP_073689213.1 | hypothetical protein | - |
| D8668_RS05020 () | 1094789..1095289 | - | 501 | WP_003099819.1 | integrating conjugative element protein | - |
| D8668_RS05025 () | 1095286..1095867 | - | 582 | WP_003117072.1 | Phosphopentomutase | VF |
| D8668_RS05030 () | 1095852..1096607 | - | 756 | WP_003099814.1 | TIGR03759 family integrating conjugative element protein | - |
| D8668_RS05035 () | 1096618..1097316 | - | 699 | WP_023121525.1 | hypothetical protein | - |
| D8668_RS05040 () | 1097768..1099102 | - | 1335 | WP_003117070.1 | three-Cys-motif partner protein TcmP | - |
| D8668_RS05045 () | 1099120..1099863 | - | 744 | WP_003117069.1 | phage Gp37/Gp68 family protein | - |
| D8668_RS05050 () | 1100096..1101286 | - | 1191 | WP_003117068.1 | three-Cys-motif partner protein TcmP | - |
| D8668_RS05055 () | 1101486..1101942 | - | 457 | Protein_969 | IS3 family transposase | - |
| D8668_RS05060 () | 1102037..1104286 | - | 2250 | WP_003099803.1 | DEAD/DEAH box helicase | - |
| D8668_RS05065 () | 1104391..1105836 | - | 1446 | WP_003099801.1 | class I SAM-dependent methyltransferase | - |
| D8668_RS05070 () | 1105866..1106471 | - | 606 | WP_003099799.1 | hypothetical protein | - |
| D8668_RS05075 () | 1106564..1106824 | - | 261 | WP_003099797.1 | hypothetical protein | - |
| D8668_RS05080 () | 1106892..1107254 | - | 363 | WP_003099795.1 | hypothetical protein | - |
| D8668_RS05085 () | 1107324..1107599 | - | 276 | WP_003099794.1 | hypothetical protein | - |
| D8668_RS05090 () | 1107596..1108228 | - | 633 | WP_003099792.1 | DUF3275 family protein | - |
| D8668_RS05095 () | 1108285..1108635 | - | 351 | WP_003099791.1 | hypothetical protein | - |
| D8668_RS05100 () | 1108871..1109584 | - | 714 | WP_003121003.1 | hypothetical protein | - |
| D8668_RS05105 () | 1109776..1109973 | - | 198 | WP_003448593.1 | hypothetical protein | - |
| D8668_RS32555 () | 1110047..1110205 | - | 159 | WP_003121002.1 | hypothetical protein | - |
| D8668_RS05110 () | 1110343..1110831 | - | 489 | WP_003448595.1 | DUF3577 domain-containing protein | - |
| D8668_RS32560 () | 1111293..1111469 | - | 177 | WP_003149538.1 | hypothetical protein | - |
| D8668_RS05115 () | 1111546..1112112 | - | 567 | WP_023110988.1 | hypothetical protein | - |
| D8668_RS05125 () | 1112422..1113420 | - | 999 | WP_022579633.1 | Rpn family recombination-promoting nuclease/putative transposase | - |
| D8668_RS05135 () | 1114421..1114858 | - | 438 | WP_022579631.1 | Acetylornithine/succinyldiaminopimelate aminotransferase | VF |
| D8668_RS05140 () | 1114876..1116255 | - | 1380 | WP_022579630.1 | Inner membrane protein YccS | VF |
| D8668_RS05145 () | 1116248..1117204 | - | 957 | WP_022579629.1 | Flp pilus assembly complex ATPase component TadA | - |
| D8668_RS05150 () | 1117201..1117731 | - | 531 | WP_003099765.1 | Protein YhfA | VF |
| D8668_RS05155 () | 1117753..1118832 | - | 1080 | WP_003109360.1 | Phosphoribulokinase, plasmid | VF |
| D8668_RS05160 () | 1118832..1120412 | - | 1581 | WP_003134124.1 | hypothetical protein | VF |
| D8668_RS05165 () | 1120421..1120954 | - | 534 | WP_004352829.1 | type IV pilus biogenesis protein PilP | - |
| D8668_RS05170 () | 1120944..1122269 | - | 1326 | WP_022579625.1 | type 4b pilus protein PilO2 | - |
| D8668_RS05175 () | 1122273..1123982 | - | 1710 | WP_023093673.1 | General stress protein 14 | VF |
| D8668_RS05180 () | 1123982..1125106 | - | 1125 | WP_023093672.1 | Glutathione-regulated potassium-efflux system protein KefC | VF |
| D8668_RS05185 () | 1125308..1125607 | + | 300 | WP_003120987.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| D8668_RS05190 () | 1125604..1125894 | + | 291 | WP_003448662.1 | putative addiction module antidote protein | Antitoxin Detail |
| D8668_RS05195 () | 1125977..1126312 | - | 336 | WP_022579623.1 | hypothetical protein | - |
| D8668_RS05200 () | 1126451..1128427 | - | 1977 | WP_022579622.1 | DEAD/DEAH box helicase | - |
| D8668_RS05205 () | 1128424..1130313 | - | 1890 | WP_033989533.1 | hypothetical protein | - |
| D8668_RS05210 () | 1130633..1131385 | - | 753 | WP_023093669.1 | hypothetical protein | - |
| D8668_RS05215 () | 1131393..1133312 | - | 1920 | WP_022579620.1 | type I DNA topoisomerase | - |
| D8668_RS32780 () | 1133428..1133751 | - | 324 | WP_170987004.1 | CrpP family protein | - |
| D8668_RS05225 () | 1133702..1134013 | - | 312 | WP_022579619.1 | helix-turn-helix domain-containing protein | - |
| D8668_RS05230 () | 1134163..1134651 | - | 489 | WP_022579618.1 | single-stranded DNA-binding protein | - |
| D8668_RS05235 () | 1134681..1135511 | - | 831 | WP_023108757.1 | Rha family transcriptional regulator | - |
| D8668_RS05240 () | 1135559..1136107 | - | 549 | WP_022579615.1 | DUF3158 family protein | - |
| D8668_RS05245 () | 1136113..1136841 | - | 729 | WP_003448749.1 | TIGR03761 family integrating conjugative element protein | - |
| D8668_RS05255 () | 1137107..1137742 | - | 636 | WP_079866755.1 | hypothetical protein | - |
| D8668_RS05270 () | 1139878..1141203 | - | 1326 | WP_031675614.1 | hypothetical protein | - |
| D8668_RS05275 () | 1141206..1141961 | - | 756 | WP_003121580.1 | DUF2857 domain-containing protein | - |
| D8668_RS05280 () | 1141989..1143722 | - | 1734 | WP_003448780.1 | ParB family protein | - |
| D8668_RS05285 () | 1143719..1143988 | - | 270 | WP_003448782.1 | Arc family DNA-binding protein | - |
| D8668_RS05290 () | 1144009..1144899 | - | 891 | WP_022579612.1 | DNA adenine methylase | - |
| D8668_RS05295 () | 1144896..1145918 | - | 1023 | WP_022579611.1 | nucleoid-associated protein YejK | - |
| D8668_RS05300 () | 1145918..1146151 | - | 234 | WP_003103841.1 | hypothetical protein | - |
| D8668_RS05305 () | 1146144..1146386 | - | 243 | WP_022579610.1 | hypothetical protein | - |
| D8668_RS05310 () | 1146379..1146636 | - | 258 | WP_004352848.1 | hypothetical protein | - |
| D8668_RS05315 () | 1146633..1147160 | - | 528 | WP_022579609.1 | hypothetical protein | - |
| D8668_RS05325 () | 1147513..1147794 | + | 282 | WP_017002281.1 | hypothetical protein | - |
| D8668_RS32565 () | 1148239..1148685 | + | 447 | WP_003117028.1 | hypothetical protein | - |
| D8668_RS05335 () | 1149124..1150467 | - | 1344 | WP_019486079.1 | replicative DNA helicase | - |
| D8668_RS05340 () | 1150464..1150682 | - | 219 | WP_003122068.1 | hypothetical protein | - |
| D8668_RS05345 () | 1150666..1151373 | - | 708 | WP_003122069.1 | HNH endonuclease | - |
| D8668_RS05350 () | 1151370..1152071 | - | 702 | WP_022579606.1 | DUF2786 domain-containing protein | - |
| D8668_RS05355 () | 1152071..1152754 | - | 684 | WP_033989458.1 | Lar family restriction alleviation protein | - |
| D8668_RS05360 () | 1152751..1153497 | - | 747 | WP_033989460.1 | hypothetical protein | - |
| D8668_RS05365 () | 1153503..1154000 | - | 498 | WP_003111783.1 | hypothetical protein | - |
| D8668_RS05370 () | 1153997..1154734 | - | 738 | WP_022579603.1 | hypothetical protein | - |
| D8668_RS05375 () | 1154736..1155602 | - | 867 | WP_003120956.1 | ParA family protein | - |
| D8668_RS05380 () | 1155974..1160281 | - | 4308 | WP_033990661.1 | two-partner secretion system exoprotein TpsA4 | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|