MGE detailed information
MGE type: Conjugative plasmid MGE length: 142207 bp
Accession: NZ_CP033394 Location: 1..142207 Organism: Klebsiella pneumoniae strain 015625 Replicon: plasmid pCTXM65_015625
Accession: NZ_CP033394 Location: 1..142207 Organism: Klebsiella pneumoniae strain 015625 Replicon: plasmid pCTXM65_015625
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DCD52_RS00135 () | 1..720 | + | 720 | WP_001749982.1 | replication initiation protein | - |
| DCD52_RS00145 () | 1487..1735 | - | 249 | Protein_1 | Tn3 family transposase TnBth3 | Transposase |
| DCD52_RS00150 () | 1799..2503 | + | 705 | WP_001067855.1 | Tn3 family transposase TnBth3 | Transposase |
| DCD52_RS00155 () | 2556..4070 | - | 1515 | Protein_3 | conjugal transfer mating pair stabilization protein TraG | - |
| DCD52_RS00160 () | 4067..5095 | - | 1029 | Protein_4 | F-type conjugal transfer protein TraH | - |
| DCD52_RS00170 () | 5147..5851 | - | 705 | WP_001067855.1 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| DCD52_RS00175 () | 5876..6223 | + | 348 | Protein_6 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| DCD52_RS00180 () | 6278..6982 | - | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| DCD52_RS00185 () | 7046..7207 | + | 162 | Protein_8 | DNA helicase | - |
| DCD52_RS00190 () | 7227..7973 | + | 747 | WP_000205770.1 | conjugal transfer pilus acetylase TraX | - |
| DCD52_RS00195 () | 8028..8588 | + | 561 | WP_000139328.1 | fertility inhibition protein FinO | - |
| DCD52_RS00200 () | 8720..8920 | + | 201 | WP_015059022.1 | hypothetical protein | - |
| DCD52_RS00205 () | 9306..9905 | + | 600 | WP_032083981.1 | hypothetical protein | - |
| DCD52_RS00210 () | 10069..10299 | + | 231 | WP_001736714.1 | hypothetical protein | - |
| - () | 10500..10559 | - | 60 | NuclAT_0 | - | Antitoxin Detail |
| - () | 10500..10559 | - | 60 | NuclAT_0 | - | Antitoxin Detail |
| - () | 10500..10559 | - | 60 | NuclAT_0 | - | Antitoxin Detail |
| - () | 10500..10559 | - | 60 | NuclAT_0 | - | Antitoxin Detail |
| DCD52_RS00220 () | 10604..10753 | + | 150 | WP_001312851.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| DCD52_RS00225 () | 11037..11285 | + | 249 | WP_000083837.1 | replication regulatory protein RepA | - |
| DCD52_RS00235 () | 11530..11604 | + | 75 | WP_001375168.1 | RepA leader peptide Tap | - |
| DCD52_RS00240 () | 11597..12454 | + | 858 | WP_032495102.1 | incFII family plasmid replication initiator RepA | - |
| DCD52_RS00250 () | 13393..14046 | + | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| DCD52_RS00255 () | 14139..14396 | + | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| DCD52_RS00260 () | 14329..14730 | + | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| DCD52_RS00265 () | 14979..15394 | + | 416 | Protein_21 | IS1 family transposase | - |
| DCD52_RS00270 () | 15430..15975 | - | 546 | Protein_22 | Tn3 family transposase TnpA_Tn3 | Transposase |
| DCD52_RS00275 () | 16041..16745 | - | 705 | WP_001067855.1 | IS1380 family transposase ISEcp1 | Transposase |
| DCD52_RS00280 () | 16815..17006 | + | 192 | Protein_24 | IS1380 family transposase ISEcp1 | Transposase |
| DCD52_RS00285 () | 17256..18131 | + | 876 | WP_013188475.1 | Beta-lactamase Toho-1 | ARG |
| DCD52_RS00290 () | 18166..19134 | + | 969 | WP_013362812.1 | IS5 family transposase IS903B | Transposase |
| DCD52_RS00295 () | 19191..20288 | + | 1098 | Protein_27 | TonB-dependent receptor | - |
| DCD52_RS00300 () | 20356..20805 | - | 450 | Protein_28 | PAS domain-containing protein | - |
| DCD52_RS00305 () | 20885..21589 | - | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| DCD52_RS00310 () | 21715..22089 | - | 375 | WP_008324180.1 | hypothetical protein | - |
| DCD52_RS00315 () | 22715..23074 | - | 360 | WP_015493069.1 | hypothetical protein | - |
| DCD52_RS00320 () | 23136..23459 | - | 324 | WP_008324183.1 | hypothetical protein | - |
| DCD52_RS00325 () | 23456..24184 | - | 729 | WP_008324185.1 | plasmid SOS inhibition protein A | - |
| DCD52_RS00330 () | 24181..24612 | - | 432 | WP_107317142.1 | conjugation system SOS inhibitor PsiB | - |
| DCD52_RS00335 () | 24655..26664 | - | 2010 | Protein_35 | ParB/RepB/Spo0J family partition protein | - |
| DCD52_RS00340 () | 26735..26965 | - | 231 | WP_015493071.1 | DUF905 domain-containing protein | - |
| DCD52_RS00345 () | 27591..27908 | - | 318 | Protein_37 | hypothetical protein | - |
| DCD52_RS00350 () | 27943..28197 | - | 255 | WP_015493072.1 | DNA polymerase III subunit theta | - |
| DCD52_RS00355 () | 28390..28581 | - | 192 | WP_015493073.1 | hypothetical protein | - |
| DCD52_RS00360 () | 28624..29130 | - | 507 | WP_015493074.1 | antirestriction protein ArdA | - |
| DCD52_RS00365 () | 29535..30314 | - | 780 | WP_015493075.1 | hypothetical protein | - |
| DCD52_RS00370 () | 30368..30787 | - | 420 | WP_015493076.1 | DUF1380 domain-containing protein | - |
| DCD52_RS00375 () | 30798..31019 | - | 222 | WP_015493077.1 | hypothetical protein | - |
| DCD52_RS00380 () | 31019..31696 | - | 678 | WP_002211749.1 | DNA methylase | - |
| DCD52_RS00385 () | 32055..32726 | + | 672 | WP_015493079.1 | SOS response-associated peptidase family protein | - |
| DCD52_RS00390 () | 32906..33328 | + | 423 | WP_015493080.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| DCD52_RS00395 () | 33328..34599 | + | 1272 | WP_015493081.1 | Y-family DNA polymerase | - |
| DCD52_RS00405 () | 34735..35706 | - | 972 | WP_016479949.1 | ParB/RepB/Spo0J family partition protein | - |
| DCD52_RS00410 () | 35703..36908 | - | 1206 | WP_015493083.1 | Plasmid partition protein A | VF |
| DCD52_RS00415 () | 37271..37903 | + | 633 | WP_022652286.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| DCD52_RS00420 () | 37957..38157 | + | 201 | WP_040219232.1 | hypothetical protein | - |
| DCD52_RS00425 () | 38304..39254 | + | 951 | WP_015493085.1 | Recombination-promoting nuclease RpnA | VF |
| DCD52_RS00430 () | 39251..39862 | - | 612 | WP_015493086.1 | DUF2913 family protein | - |
| DCD52_RS00435 () | 39859..40254 | - | 396 | WP_015493087.1 | hypothetical protein | - |
| DCD52_RS00440 () | 40307..40699 | - | 393 | Protein_55 | 3'-5' exonuclease | - |
| DCD52_RS00445 () | 40768..41748 | + | 981 | WP_000019445.1 | IS5 family transposase ISKpn26 | Transposase |
| DCD52_RS00450 () | 41895..42272 | + | 378 | Protein_57 | restriction endonuclease | - |
| DCD52_RS00455 () | 42400..42957 | + | 558 | WP_042934582.1 | hypothetical protein | - |
| DCD52_RS00460 () | 43426..44130 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| DCD52_RS00465 () | 44263..44904 | - | 642 | WP_001011939.1 | Chloramphenicol acetyltransferase 2 | ARG |
| DCD52_RS00470 () | 44966..45670 | - | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| DCD52_RS00475 () | 45750..46250 | + | 501 | WP_001239317.1 | hypothetical protein | - |
| DCD52_RS00480 () | 46462..47166 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| DCD52_RS28870 () | 47172..47312 | + | 141 | WP_001044210.1 | hypothetical protein | - |
| DCD52_RS00490 () | 47798..48535 | + | 738 | WP_001446887.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| DCD52_RS00495 () | 48532..48756 | + | 225 | WP_000743213.1 | hypothetical protein | - |
| DCD52_RS00500 () | 48878..49054 | + | 177 | WP_000954592.1 | Arm DNA-binding domain-containing protein | - |
| DCD52_RS00505 () | 49236..50240 | - | 1005 | WP_000427619.1 | IS110 family transposase IS5075 | Transposase |
| DCD52_RS00510 () | 50319..50753 | - | 435 | WP_000429836.1 | IS607 family transposase ISChh1 | Transposase |
| DCD52_RS00515 () | 50825..51175 | + | 351 | WP_001294663.1 | mercuric transport protein MerT | - |
| DCD52_RS00520 () | 51189..51464 | + | 276 | WP_000732292.1 | mercury resistance system periplasmic binding protein MerP | - |
| DCD52_RS00525 () | 51500..51922 | + | 423 | WP_001340589.1 | organomercurial transporter MerC | - |
| DCD52_RS00530 () | 51974..53668 | + | 1695 | WP_000105636.1 | mercury(II) reductase | - |
| DCD52_RS00535 () | 53686..54048 | + | 363 | WP_001277456.1 | mercury resistance co-regulator MerD | - |
| DCD52_RS00540 () | 54045..54281 | + | 237 | WP_000993386.1 | broad-spectrum mercury transporter MerE | - |
| DCD52_RS00545 () | 54317..54985 | + | 669 | WP_001300294.1 | putative signaling protein | VF |
| DCD52_RS00555 () | 55060..56232 | + | 1173 | Protein_77 | transposase | - |
| DCD52_RS00560 () | 56297..57001 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| DCD52_RS00570 () | 57053..57514 | + | 462 | Protein_79 | Tn3 family transposase TnpR_Tn3 | Transposase |
| DCD52_RS00575 () | 57637..58608 | + | 972 | Protein_80 | IS481 family transposase ISKpn27 | Transposase |
| DCD52_RS00580 () | 58577..59644 | - | 1068 | WP_108083619.1 | IS481 family transposase ISKpn28 | Transposase |
| DCD52_RS00585 () | 59716..59874 | + | 159 | WP_014343509.1 | type I toxin-antitoxin system Hok family toxin | - |
| DCD52_RS00595 () | 60567..60839 | + | 273 | WP_040245921.1 | hypothetical protein | - |
| DCD52_RS00600 () | 60836..61186 | + | 351 | WP_040245917.1 | hypothetical protein | - |
| DCD52_RS00605 () | 61201..61518 | + | 318 | WP_014343505.1 | hypothetical protein | - |
| DCD52_RS00615 () | 62359..62715 | + | 357 | WP_014343501.1 | hypothetical protein | - |
| DCD52_RS00620 () | 62776..62988 | + | 213 | WP_014343500.1 | hypothetical protein | - |
| DCD52_RS00625 () | 62999..63223 | + | 225 | WP_014343499.1 | hypothetical protein | - |
| DCD52_RS00630 () | 63304..63624 | + | 321 | WP_014343498.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| DCD52_RS00635 () | 63614..63892 | + | 279 | WP_004152721.1 | helix-turn-helix domain-containing protein | - |
| DCD52_RS00660 () | 64836..65378 | + | 543 | WP_014343512.1 | single-stranded DNA-binding protein | - |
| DCD52_RS00665 () | 65427..65675 | + | 249 | WP_001568055.1 | DUF905 domain-containing protein | - |
| DCD52_RS00670 () | 65745..67802 | + | 2058 | WP_015493064.1 | ParB/RepB/Spo0J family partition protein | - |
| DCD52_RS00675 () | 67847..68278 | + | 432 | WP_001568057.1 | conjugation system SOS inhibitor PsiB | - |
| DCD52_RS00680 () | 68275..69003 | + | 729 | WP_001568058.1 | plasmid SOS inhibition protein A | - |
| DCD52_RS00685 () | 69000..69326 | + | 327 | WP_013023807.1 | hypothetical protein | - |
| DCD52_RS00690 () | 69382..69756 | + | 375 | WP_014343510.1 | hypothetical protein | - |
| DCD52_RS00700 () | 69940..71013 | - | 1074 | WP_013609528.1 | IS481 family transposase ISKpn28 | Transposase |
| DCD52_RS00705 () | 71363..72244 | + | 882 | WP_063860634.1 | Carbapenem-hydrolyzing beta-lactamase KPC | ARG |
| DCD52_RS00710 () | 72494..73375 | - | 882 | Protein_100 | IS1182 family transposase ISKpn6 | Transposase |
| DCD52_RS00715 () | 73513..74217 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| DCD52_RS00720 () | 74251..79386 | - | 5136 | WP_071177725.1 | Multifunctional conjugation protein TraI | Relaxase |
| DCD52_RS00725 () | 79386..81584 | - | 2199 | WP_011402783.1 | type IV conjugative transfer system coupling protein TraD | - |
| DCD52_RS00730 () | 81635..82372 | - | 738 | WP_015059020.1 | hypothetical protein | - |
| DCD52_RS00735 () | 82575..83306 | - | 732 | WP_021559024.1 | complement resistance protein TraT | - |
| DCD52_RS00740 () | 83331..83852 | - | 522 | WP_000632668.1 | conjugal transfer entry exclusion protein TraS | - |
| DCD52_RS00745 () | 83885..86701 | - | 2817 | WP_015059018.1 | conjugal transfer mating pair stabilization protein TraG | - |
| DCD52_RS00750 () | 86698..87726 | - | 1029 | Protein_108 | F-type conjugal transfer protein TraH | - |
| DCD52_RS00760 () | 87778..88482 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| DCD52_RS00765 () | 88547..89137 | + | 591 | Protein_110 | IS91 family transposase ISSbo1 | Transposase |
| DCD52_RS00775 () | 89593..90297 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| DCD52_RS00785 () | 90768..91781 | - | 1014 | WP_000845048.1 | IS91 family transposase ISAzo26 | Transposase |
| DCD52_RS00790 () | 92073..92627 | + | 555 | WP_063840321.1 | Aminoglycoside N(6')-acetyltransferase type 1 | ARG |
| DCD52_RS00795 () | 92724..93176 | + | 453 | WP_001749986.1 | hypothetical protein | ARG |
| DCD52_RS00800 () | 93309..93782 | + | 474 | WP_001749985.1 | Dihydrofolate reductase type 1 | ARG |
| DCD52_RS00805 () | 93963..94808 | + | 846 | WP_001749984.1 | Streptomycin 3''-adenylyltransferase | ARG |
| DCD52_RS00810 () | 94925..95272 | + | 348 | WP_000679427.1 | Multidrug transporter EmrE | ARG |
| DCD52_RS00815 () | 95266..96105 | + | 840 | WP_000259031.1 | Dihydropteroate synthase | ARG |
| DCD52_RS00825 () | 96233..96733 | + | 501 | WP_000376623.1 | GNAT family N-acetyltransferase | - |
| DCD52_RS00835 () | 97240..98004 | + | 765 | WP_001389365.1 | IS6-like element IS6100 family transposase | - |
| DCD52_RS00850 () | 98265..99479 | + | 1215 | WP_004098817.1 | type II site-specific deoxyribonuclease | - |
| DCD52_RS00855 () | 99513..100916 | - | 1404 | WP_072094655.1 | DNA cytosine methyltransferase | - |
| DCD52_RS00860 () | 101045..101317 | + | 273 | Protein_123 | IS1 family transposase | - |
| DCD52_RS00865 () | 101328..101534 | - | 207 | WP_001749967.1 | hypothetical protein | - |
| DCD52_RS00870 () | 101539..102180 | - | 642 | WP_001749966.1 | restriction endonuclease | - |
| DCD52_RS00875 () | 102236..102547 | - | 312 | WP_001452736.1 | hypothetical protein | - |
| DCD52_RS00880 () | 102583..102897 | - | 315 | WP_001749965.1 | KikA protein | - |
| DCD52_RS00885 () | 102894..103238 | - | 345 | WP_001749964.1 | hypothetical protein | - |
| DCD52_RS00890 () | 103254..103604 | - | 351 | WP_024129965.1 | H-NS histone family protein | - |
| DCD52_RS00895 () | 103668..104402 | + | 735 | WP_001749963.1 | Type IV secretion system protein virB1 | VF |
| DCD52_RS00900 () | 104411..104692 | + | 282 | WP_000440698.1 | hypothetical protein | - |
| DCD52_RS00905 () | 104702..104995 | + | 294 | WP_001749962.1 | hypothetical protein | - |
| DCD52_RS00910 () | 105045..105362 | + | 318 | WP_000496058.1 | hypothetical protein | VF |
| DCD52_RS00915 () | 105362..107962 | + | 2601 | WP_001749961.1 | Type IV secretion system protein virB4 | VF |
| DCD52_RS00920 () | 107980..108693 | + | 714 | WP_001749960.1 | Type IV secretion system protein virB5 | VF |
| DCD52_RS00925 () | 108701..108928 | + | 228 | WP_001749959.1 | IncN-type entry exclusion lipoprotein EexN | - |
| DCD52_RS00930 () | 108944..109984 | + | 1041 | WP_001749958.1 | type IV secretion system protein | - |
| DCD52_RS00940 () | 110203..110901 | + | 699 | WP_000646594.1 | Type IV secretion system protein virB8 | VF |
| DCD52_RS00945 () | 110912..111796 | + | 885 | WP_000735066.1 | Type IV secretion system protein virB9 | VF |
| DCD52_RS00950 () | 111796..112956 | + | 1161 | WP_000101710.1 | Protein virB10 | VF |
| DCD52_RS00955 () | 112998..113993 | + | 996 | WP_000128596.1 | Type IV secretion system protein VirB11 | VF |
| DCD52_RS00960 () | 113993..114526 | + | 534 | WP_000792636.1 | Phospholipase D | VF |
| DCD52_RS28910 () | 114700..114828 | - | 129 | WP_002210551.1 | hypothetical protein | - |
| DCD52_RS00965 () | 114982..115194 | - | 213 | Protein_144 | FipA | - |
| DCD52_RS00970 () | 115450..118455 | - | 3006 | WP_123766424.1 | Tn3 family transposase TnpA_Tn3 | Transposase |
| DCD52_RS00975 () | 118619..119176 | + | 558 | WP_001235713.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| DCD52_RS00980 () | 119359..120219 | + | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| DCD52_RS00985 () | 120418..120660 | + | 243 | WP_000844627.1 | transposase | - |
| DCD52_RS00990 () | 120692..121342 | - | 651 | WP_000164043.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| DCD52_RS00995 () | 121448..122647 | + | 1200 | WP_012579085.1 | Tetracycline resistance protein, class C | ARG |
| DCD52_RS01000 () | 122679..123332 | - | 654 | Protein_151 | EamA family transporter | - |
| DCD52_RS01005 () | 123563..123700 | - | 138 | Protein_152 | FipA | - |
| DCD52_RS01010 () | 123700..126942 | - | 3243 | WP_001749977.1 | Multifunctional conjugation protein TraI | Relaxase |
| DCD52_RS01015 () | 126942..128471 | - | 1530 | WP_001749976.1 | type IV secretion system DNA-binding domain-containing protein | - |
| DCD52_RS01020 () | 128473..128889 | - | 417 | WP_001749975.1 | hypothetical protein | - |
| DCD52_RS01025 () | 129662..129799 | + | 138 | WP_020319858.1 | hypothetical protein | - |
| DCD52_RS01030 () | 129808..130524 | + | 717 | WP_001749973.1 | StdB | - |
| DCD52_RS01035 () | 130526..130894 | + | 369 | WP_001749972.1 | hypothetical protein | - |
| DCD52_RS01040 () | 131187..131420 | + | 234 | WP_048968061.1 | hypothetical protein | - |
| DCD52_RS01045 () | 131531..131851 | - | 321 | WP_001749971.1 | hypothetical protein | - |
| DCD52_RS01050 () | 131906..132085 | - | 180 | WP_000214483.1 | hypothetical protein | - |
| DCD52_RS01055 () | 132812..133321 | - | 510 | WP_000129958.1 | antirestriction protein ArdA | - |
| DCD52_RS01060 () | 134674..135006 | - | 333 | WP_012561126.1 | hypothetical protein | - |
| DCD52_RS01065 () | 135215..135499 | - | 285 | WP_001750002.1 | hypothetical protein | - |
| DCD52_RS01070 () | 135568..135927 | - | 360 | WP_001750003.1 | hypothetical protein | - |
| DCD52_RS01075 () | 135924..136220 | - | 297 | WP_000545925.1 | hypothetical protein | - |
| DCD52_RS01080 () | 137106..137345 | - | 240 | WP_000932975.1 | hypothetical protein | - |
| DCD52_RS01085 () | 137355..137759 | - | 405 | WP_000881513.1 | hypothetical protein | - |
| DCD52_RS01090 () | 137817..138242 | - | 426 | WP_000447669.1 | antirestriction protein | - |
| DCD52_RS01100 () | 138657..139097 | + | 441 | WP_000861760.1 | translesion error-prone DNA polymerase V autoproteolytic subunit MucA | - |
| DCD52_RS01105 () | 139085..140350 | + | 1266 | WP_001749980.1 | translesion error-prone DNA polymerase V subunit MucB | - |
| DCD52_RS01110 () | 140501..141292 | + | 792 | WP_001452808.1 | SprT-like domain-containing protein | - |
| DCD52_RS01115 () | 141307..141648 | - | 342 | WP_000057569.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|