MGE detailed information
MGE type: Prophage MGE length: 24933 bp
Accession: NZ_CP033214 Location: 2133713..2158645 Organism: Clostridioides difficile strain 12038 Replicon: chromosome
Accession: NZ_CP033214 Location: 2133713..2158645 Organism: Clostridioides difficile strain 12038 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EBL90_RS10415 () | 2129219..2130139 | + | 921 | WP_003424149.1 | PhzF family isomerase | - |
| EBL90_RS10420 () | 2130364..2130975 | + | 612 | WP_003424150.1 | CoA pyrophosphatase | - |
| EBL90_RS10425 () | 2131280..2131618 | + | 339 | WP_009905652.1 | DUF3784 domain-containing protein | - |
| EBL90_RS10435 () | 2132026..2133462 | - | 1437 | WP_003424153.1 | tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB | - |
| EBL90_RS10440 () | 2133713..2135149 | - | 1437 | WP_009905653.1 | N-acetylmuramoyl-L-alanine amidase LytC | VF |
| EBL90_RS10450 () | 2135978..2136529 | - | 552 | WP_003424155.1 | tryptophan transporter | - |
| EBL90_RS10455 () | 2137354..2137776 | - | 423 | WP_122045919.1 | hypothetical protein | - |
| EBL90_RS10460 () | 2138114..2138599 | - | 486 | WP_009905654.1 | SH3 domain-containing protein | - |
| EBL90_RS10465 () | 2139125..2139463 | - | 339 | WP_003424159.1 | hypothetical protein | - |
| EBL90_RS10470 () | 2139450..2139677 | - | 228 | WP_003424160.1 | helix-turn-helix domain-containing protein | - |
| EBL90_RS10475 () | 2140014..2140250 | + | 237 | WP_003424162.1 | hypothetical protein | - |
| EBL90_RS10480 () | 2140527..2140811 | - | 285 | WP_122045920.1 | hypothetical protein | - |
| EBL90_RS10485 () | 2141153..2141410 | - | 258 | WP_003424164.1 | hypothetical protein | - |
| EBL90_RS10490 () | 2141549..2141920 | - | 372 | WP_003424165.1 | hypothetical protein | - |
| EBL90_RS10495 () | 2142363..2142935 | - | 573 | WP_003424166.1 | hypothetical protein | - |
| EBL90_RS10510 () | 2143921..2144115 | - | 195 | WP_003424168.1 | hypothetical protein | - |
| EBL90_RS10520 () | 2144652..2145032 | - | 381 | WP_003424180.1 | hypothetical protein | - |
| EBL90_RS10525 () | 2145025..2145282 | - | 258 | WP_003424182.1 | hypothetical protein | - |
| EBL90_RS10530 () | 2145269..2145502 | - | 234 | WP_003424184.1 | hypothetical protein | - |
| EBL90_RS10535 () | 2145690..2145878 | + | 189 | WP_003424185.1 | helix-turn-helix transcriptional regulator | - |
| - () | 2148766..2148866 | + | 101 | NuclAT_0 | - | Antitoxin Detail |
| EBL90_RS10540 () | 2148810..2148962 | - | 153 | WP_003424190.1 | hypothetical protein | Toxin Detail |
| EBL90_RS19265 () | 2149482..2149724 | + | 243 | WP_003424191.1 | hypothetical protein | - |
| EBL90_RS19270 () | 2149790..2150335 | + | 546 | WP_077699404.1 | Putative prophage phiRv2 integrase ; Integrase | Integrase |
| EBL90_RS10555 () | 2150880..2151725 | + | 846 | WP_003424194.1 | DUF4878 domain-containing protein | - |
| EBL90_RS10560 () | 2151949..2152113 | - | 165 | WP_003424195.1 | hypothetical protein | - |
| EBL90_RS10565 () | 2152645..2152976 | - | 332 | Protein_1915 | carboxymuconolactone decarboxylase family protein | - |
| EBL90_RS10570 () | 2153236..2153877 | - | 642 | WP_003424198.1 | SdpI family protein | - |
| EBL90_RS10575 () | 2153858..2154151 | - | 294 | WP_009889969.1 | autorepressor SdpR family transcription factor | - |
| EBL90_RS10580 () | 2154545..2154604 | + | 60 | WP_071585685.1 | hypothetical protein | - |
| EBL90_RS10590 () | 2155120..2155872 | - | 753 | WP_003424201.1 | TSUP family transporter | - |
| EBL90_RS10595 () | 2155933..2157588 | - | 1656 | WP_003424202.1 | PocR ligand-binding domain-containing protein | - |
| EBL90_RS10600 () | 2157600..2157962 | - | 363 | WP_009905671.1 | Transcriptional regulator MntR | VF |
| EBL90_RS10605 () | 2158277..2158645 | - | 369 | WP_003424204.1 | IS607 family transposase ISCbo6 | Transposase |
| EBL90_RS10610 () | 2158794..2159588 | + | 795 | WP_009905672.1 | 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase | - |
| EBL90_RS10615 () | 2159741..2160169 | - | 429 | WP_003424207.1 | flavodoxin | - |
| EBL90_RS10620 () | 2160683..2161621 | - | 939 | WP_003424208.1 | S8 family peptidase | - |
| EBL90_RS10625 () | 2162135..2162947 | - | 813 | WP_003424210.1 | alpha/beta hydrolase | - |
| EBL90_RS10630 () | 2162976..2163602 | - | 627 | WP_009905677.1 | TetR/AcrR family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|