MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 103680 bp
Accession: NZ_CP033112 Location: 1500609..1604288 Organism: Staphylococcus aureus strain ST20130944 Replicon: chromosome
Accession: NZ_CP033112 Location: 1500609..1604288 Organism: Staphylococcus aureus strain ST20130944 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SAST44_RS07025 () | 1496152..1497543 | - | 1392 | WP_000414703.1 | multidrug efflux MFS transporter NorB | - |
| SAST44_RS07030 () | 1497700..1499022 | - | 1323 | WP_000064778.1 | amino acid permease | - |
| SAST44_RS07035 () | 1499053..1500093 | - | 1041 | WP_000210828.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| SAST44_RS07040 () | 1500188..1501306 | - | 1119 | WP_000959426.1 | alanine dehydrogenase | - |
| SAST44_RS07045 () | 1501781..1502659 | - | 879 | WP_001133021.1 | 5'-3' exonuclease | - |
| SAST44_RS07050 () | 1502679..1506119 | - | 3441 | WP_000608490.1 | dynamin family protein | - |
| SAST44_RS07055 () | 1506423..1507764 | + | 1342 | Protein_1381 | PepSY domain-containing protein | - |
| SAST44_RS07060 () | 1508109..1508441 | - | 333 | WP_000516800.1 | DUF4889 domain-containing protein | - |
| SAST44_RS07065 () | 1508525..1509670 | - | 1146 | WP_000487150.1 | class I SAM-dependent RNA methyltransferase | - |
| SAST44_RS07075 () | 1510321..1510665 | - | 345 | WP_001286320.1 | cell division regulator GpsB | - |
| SAST44_RS07080 () | 1510679..1511242 | - | 564 | WP_000241308.1 | DUF1273 domain-containing protein | - |
| SAST44_RS07085 () | 1511235..1511585 | - | 351 | WP_001000803.1 | YppE family protein | - |
| SAST44_RS07090 () | 1512073..1512750 | + | 678 | WP_001794297.1 | Holliday junction resolvase RecU | - |
| SAST44_RS07095 () | 1512747..1514897 | + | 2151 | WP_000138342.1 | penicillin-binding protein | - |
| SAST44_RS07100 () | 1515447..1515788 | - | 342 | WP_000182035.1 | hypothetical protein | - |
| SAST44_RS07105 () | 1515793..1516452 | - | 660 | WP_000253765.1 | endonuclease III | - |
| SAST44_RS07110 () | 1516442..1517128 | - | 687 | WP_000362222.1 | DnaD domain-containing protein | - |
| SAST44_RS07115 () | 1517457..1518749 | - | 1293 | WP_000858795.1 | asparagine--tRNA ligase | - |
| SAST44_RS07120 () | 1519071..1521764 | - | 2694 | WP_000525060.1 | ATP-dependent helicase DinG | - |
| SAST44_RS07125 () | 1521788..1522759 | - | 972 | WP_000049917.1 | biotin--[acetyl-CoA-carboxylase] ligase | - |
| SAST44_RS07130 () | 1522746..1523948 | - | 1203 | WP_000361536.1 | CCA tRNA nucleotidyltransferase | - |
| SAST44_RS07135 () | 1523953..1525095 | - | 1143 | WP_000690024.1 | N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA | - |
| SAST44_RS07140 () | 1525339..1525656 | - | 318 | WP_000839927.1 | nucleotide pyrophosphohydrolase | - |
| SAST44_RS07145 () | 1525992..1526672 | - | 681 | WP_001827022.1 | zinc metallopeptidase | - |
| SAST44_RS07150 () | 1526744..1527331 | - | 588 | WP_000154479.1 | DUF1405 domain-containing protein | - |
| SAST44_RS07155 () | 1527321..1527896 | - | 576 | WP_000005208.1 | YpiB family protein | - |
| SAST44_RS07160 () | 1527910..1529154 | - | 1245 | WP_000389521.1 | hypothetical protein | - |
| SAST44_RS07165 () | 1529161..1530459 | - | 1299 | WP_000245891.1 | 3-phosphoshikimate 1-carboxyvinyltransferase | - |
| SAST44_RS07170 () | 1530469..1531533 | - | 1065 | WP_000776318.1 | 3-dehydroquinate synthase | - |
| SAST44_RS07175 () | 1531559..1532725 | - | 1167 | WP_001269937.1 | chorismate synthase | - |
| SAST44_RS07180 () | 1533194..1533643 | - | 450 | WP_000442480.1 | nucleoside-diphosphate kinase | - |
| SAST44_RS07185 () | 1533735..1534694 | - | 960 | WP_001096481.1 | polyprenyl synthetase family protein | - |
| SAST44_RS07190 () | 1534696..1535421 | - | 726 | WP_000774679.1 | demethylmenaquinone methyltransferase | - |
| SAST44_RS07195 () | 1535424..1535996 | - | 573 | WP_000450555.1 | heptaprenyl diphosphate synthase component 1 | - |
| SAST44_RS07200 () | 1536427..1536699 | - | 273 | WP_001043863.1 | HU family DNA-binding protein | - |
| SAST44_RS07205 () | 1536870..1537868 | - | 999 | WP_000161753.1 | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase | - |
| SAST44_RS07210 () | 1537885..1539195 | - | 1311 | WP_000165530.1 | GTPase Der | VF |
| SAST44_RS07215 () | 1539417..1540592 | - | 1176 | WP_000133953.1 | 30S ribosomal protein S1 | - |
| SAST44_RS07220 () | 1540979..1542196 | - | 1218 | WP_001291561.1 | Transposase from transposon Tn916 ; Integrase | Integrase |
| SAST44_RS07225 () | 1542278..1542481 | - | 204 | WP_000814511.1 | excisionase | - |
| SAST44_RS07235 () | 1542942..1543172 | - | 231 | WP_000857133.1 | helix-turn-helix domain-containing protein | - |
| SAST44_RS07240 () | 1543169..1543591 | - | 423 | WP_000804885.1 | sigma-70 family RNA polymerase sigma factor | - |
| SAST44_RS07255 () | 1544096..1544449 | + | 354 | WP_001227347.1 | helix-turn-helix transcriptional regulator | - |
| SAST44_RS07260 () | 1544509..1544676 | - | 168 | WP_000336323.1 | cysteine-rich KTR domain-containing protein | - |
| SAST44_RS07265 () | 1544795..1546714 | - | 1920 | WP_000691736.1 | Tetracycline resistance protein TetM from transposon TnFO1 | VF |
| SAST44_RS07270 () | 1546730..1546846 | - | 117 | WP_001814923.1 | tetracycline resistance determinant leader peptide | - |
| SAST44_RS07275 () | 1547091..1548023 | - | 933 | WP_001224318.1 | conjugal transfer protein | - |
| SAST44_RS07280 () | 1548020..1549021 | - | 1002 | WP_000769868.1 | putative endopeptidase p60 | VF |
| SAST44_RS07285 () | 1549018..1551195 | - | 2178 | WP_155682257.1 | YtxH domain-containing protein | - |
| SAST44_RS07290 () | 1551198..1553645 | - | 2448 | WP_000331160.1 | ATP-binding protein | - |
| SAST44_RS07295 () | 1553629..1554135 | - | 507 | WP_000506270.1 | conjugal transfer protein | - |
| SAST44_RS07300 () | 1554110..1554607 | - | 498 | WP_000342539.1 | antirestriction protein ArdA | - |
| SAST44_RS07305 () | 1554724..1554945 | - | 222 | WP_001009056.1 | hypothetical protein | - |
| SAST44_RS07310 () | 1554988..1556193 | - | 1206 | WP_000398284.1 | replication initiation factor domain-containing protein | - |
| SAST44_RS07315 () | 1556216..1556368 | - | 153 | WP_000879507.1 | hypothetical protein | - |
| SAST44_RS07320 () | 1556371..1557756 | - | 1386 | WP_000813488.1 | DNA translocase FtsK | - |
| SAST44_RS07325 () | 1557785..1558171 | - | 387 | WP_000985015.1 | YdcP family protein | - |
| SAST44_RS07330 () | 1558187..1558501 | - | 315 | WP_000420682.1 | YdcP family protein | - |
| SAST44_RS07340 () | 1558888..1559079 | - | 192 | WP_001791199.1 | hypothetical protein | - |
| SAST44_RS07345 () | 1559196..1559312 | - | 117 | WP_001791200.1 | hypothetical protein | - |
| SAST44_RS07350 () | 1559343..1560002 | - | 660 | WP_000644393.1 | (d)CMP kinase | - |
| SAST44_RS07355 () | 1560079..1561047 | + | 969 | WP_000681744.1 | asparaginase | - |
| SAST44_RS07360 () | 1561162..1562148 | - | 987 | WP_001174260.1 | YpdA family putative bacillithiol disulfide reductase | - |
| SAST44_RS07365 () | 1562309..1562395 | - | 87 | WP_016186859.1 | hypothetical protein | - |
| SAST44_RS07370 () | 1562533..1563993 | - | 1461 | WP_000069298.1 | Elastin-binding protein EbpS | VF |
| SAST44_RS07375 () | 1564146..1565525 | - | 1380 | WP_000902107.1 | ATP-dependent DNA helicase | - |
| SAST44_RS07380 () | 1565515..1566468 | - | 954 | WP_001163814.1 | helix-turn-helix domain-containing protein | - |
| SAST44_RS07385 () | 1566576..1566824 | + | 249 | WP_001151997.1 | ferredoxin | - |
| SAST44_RS07390 () | 1566930..1567475 | - | 546 | WP_001186908.1 | ECF transporter S component | - |
| SAST44_RS07395 () | 1567754..1567918 | - | 165 | WP_001799520.1 | hypothetical protein | - |
| SAST44_RS07400 () | 1568123..1569031 | - | 909 | WP_000476878.1 | DUF1672 domain-containing protein | - |
| SAST44_RS07405 () | 1569089..1569994 | - | 906 | WP_000913238.1 | DUF1672 domain-containing protein | - |
| SAST44_RS14455 () | 1570084..1570299 | - | 216 | WP_170267452.1 | hypothetical protein | - |
| SAST44_RS07415 () | 1570676..1571512 | - | 837 | WP_155716901.1 | hypothetical protein | - |
| SAST44_RS07420 () | 1571890..1572645 | - | 756 | WP_000861038.1 | CHAP domain-containing protein | - |
| SAST44_RS07425 () | 1572657..1572911 | - | 255 | WP_000611512.1 | phage holin | - |
| SAST44_RS07430 () | 1572963..1573070 | + | 108 | WP_001791821.1 | hypothetical protein | - |
| - () | 1572992..1573131 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1572992..1573131 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1572992..1573131 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1572992..1573131 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1573000..1573055 | + | 56 | - | - | Antitoxin Detail |
| SAST44_RS07435 () | 1573123..1573299 | - | 177 | WP_011447039.1 | putative holin-like toxin | Toxin Detail |
| SAST44_RS07440 () | 1573408..1574181 | - | 774 | WP_000750406.1 | Enterotoxin type A | VF |
| SAST44_RS07445 () | 1574602..1574976 | - | 375 | WP_000340977.1 | hypothetical protein | - |
| SAST44_RS07450 () | 1575032..1575319 | - | 288 | WP_001040259.1 | hypothetical protein | - |
| SAST44_RS07455 () | 1575366..1575518 | - | 153 | WP_001153681.1 | hypothetical protein | - |
| SAST44_RS07460 () | 1575508..1579293 | - | 3786 | WP_155716902.1 | hypothetical protein | - |
| SAST44_RS07465 () | 1579309..1580799 | - | 1491 | WP_001154326.1 | phage tail family protein | - |
| SAST44_RS07470 () | 1580799..1585448 | - | 4650 | WP_155716903.1 | phage tail tape measure protein | - |
| SAST44_RS07475 () | 1585504..1585626 | - | 123 | WP_000570353.1 | hypothetical protein | - |
| SAST44_RS07480 () | 1585686..1586132 | - | 447 | WP_000442604.1 | hypothetical protein | - |
| SAST44_RS07485 () | 1586197..1587150 | - | 954 | WP_000570645.1 | Ig-like domain-containing protein | - |
| SAST44_RS07490 () | 1587151..1587531 | - | 381 | WP_000608369.1 | hypothetical protein | - |
| SAST44_RS07495 () | 1587528..1587905 | - | 378 | WP_000501001.1 | HK97 gp10 family phage protein | - |
| SAST44_RS07500 () | 1587905..1588237 | - | 333 | WP_000671501.1 | head-tail adaptor protein | - |
| SAST44_RS07505 () | 1588227..1588559 | - | 333 | WP_001177664.1 | head-tail connector protein | - |
| SAST44_RS07510 () | 1588568..1588726 | - | 159 | WP_001240639.1 | hypothetical protein | - |
| SAST44_RS07515 () | 1588763..1589998 | - | 1236 | WP_000849953.1 | phage major capsid protein | - |
| SAST44_RS07520 () | 1590085..1590669 | - | 585 | WP_025173991.1 | HK97 family phage prohead protease | - |
| SAST44_RS07525 () | 1591088..1592344 | - | 1257 | WP_196492629.1 | phage portal protein | - |
| SAST44_RS07530 () | 1592347..1592550 | - | 204 | WP_001052526.1 | hypothetical protein | - |
| SAST44_RS07535 () | 1592564..1594258 | - | 1695 | WP_000568449.1 | phage terminase family protein | - |
| SAST44_RS07540 () | 1594258..1594728 | - | 471 | WP_000919030.1 | phage terminase small subunit P27 family | - |
| SAST44_RS07545 () | 1594822..1595187 | - | 366 | WP_000026170.1 | HNH endonuclease | - |
| SAST44_RS07550 () | 1595194..1595646 | - | 453 | WP_000406186.1 | nucleoside triphosphate pyrophosphohydrolase family protein | - |
| SAST44_RS07555 () | 1595761..1596222 | - | 462 | WP_002955176.1 | hypothetical protein | - |
| SAST44_RS07560 () | 1596245..1596445 | - | 201 | WP_000265041.1 | DUF1514 family protein | - |
| SAST44_RS07565 () | 1596445..1597095 | - | 651 | WP_001005262.1 | hypothetical protein | - |
| SAST44_RS07570 () | 1597254..1597403 | - | 150 | WP_000595238.1 | transcriptional activator RinB | - |
| SAST44_RS07575 () | 1597396..1597632 | - | 237 | WP_000483477.1 | hypothetical protein | - |
| SAST44_RS07580 () | 1597657..1597893 | - | 237 | WP_000195767.1 | DUF1381 domain-containing protein | - |
| SAST44_RS07585 () | 1597890..1598135 | - | 246 | WP_001282074.1 | hypothetical protein | - |
| SAST44_RS07590 () | 1598172..1598708 | - | 537 | WP_155716904.1 | dUTPase | - |
| SAST44_RS07595 () | 1598701..1598871 | - | 171 | WP_000714406.1 | hypothetical protein | - |
| SAST44_RS07600 () | 1598858..1599112 | - | 255 | WP_155716905.1 | DUF1024 family protein | - |
| SAST44_RS07605 () | 1599153..1599395 | - | 243 | WP_095256467.1 | hypothetical protein | - |
| SAST44_RS07610 () | 1599399..1599755 | - | 357 | WP_155716906.1 | hypothetical protein | - |
| SAST44_RS07615 () | 1599756..1599941 | - | 186 | WP_001187233.1 | DUF3113 family protein | - |
| SAST44_RS07620 () | 1599946..1600350 | - | 405 | WP_000049805.1 | DUF1064 domain-containing protein | - |
| SAST44_RS07625 () | 1600361..1600582 | - | 222 | WP_001123690.1 | DUF3269 family protein | - |
| SAST44_RS14460 () | 1600596..1600757 | - | 162 | WP_196492632.1 | hypothetical protein | - |
| SAST44_RS07630 () | 1600751..1601530 | - | 780 | WP_000803062.1 | ATP-binding protein | - |
| SAST44_RS07635 () | 1601540..1602310 | - | 771 | WP_000190253.1 | conserved phage C-terminal domain-containing protein | - |
| SAST44_RS07640 () | 1602376..1602657 | + | 282 | WP_000414755.1 | hypothetical protein | - |
| SAST44_RS14465 () | 1602650..1602799 | - | 150 | WP_001081076.1 | hypothetical protein | - |
| SAST44_RS07645 () | 1602796..1603467 | - | 672 | WP_155716907.1 | hypothetical protein | - |
| SAST44_RS07650 () | 1603480..1604031 | - | 552 | WP_000704705.1 | single-stranded DNA-binding protein | - |
| SAST44_RS07655 () | 1604060..1604848 | - | 789 | WP_000134097.1 | ATP-binding protein | - |
| SAST44_RS07660 () | 1604841..1605062 | - | 222 | WP_098683526.1 | DUF2483 family protein | - |
| SAST44_RS07665 () | 1605072..1605332 | - | 261 | WP_000291090.1 | DUF1108 family protein | - |
| SAST44_RS07670 () | 1605424..1605585 | - | 162 | WP_001285949.1 | DUF1270 domain-containing protein | - |
| SAST44_RS07675 () | 1605597..1605860 | - | 264 | WP_001124198.1 | helix-turn-helix domain-containing protein | - |
| SAST44_RS07680 () | 1605890..1606108 | - | 219 | WP_001037095.1 | hypothetical protein | - |
| SAST44_RS07685 () | 1606105..1606431 | - | 327 | WP_001025595.1 | hypothetical protein | - |
| SAST44_RS07690 () | 1606487..1606714 | + | 228 | WP_000801108.1 | hypothetical protein | - |
| SAST44_RS07695 () | 1606716..1606907 | - | 192 | WP_000389906.1 | hypothetical protein | - |
| SAST44_RS07700 () | 1606964..1607503 | + | 540 | WP_000351245.1 | hypothetical protein | - |
| SAST44_RS07705 () | 1607527..1607787 | - | 261 | WP_000435341.1 | transcriptional regulator | - |
| SAST44_RS07710 () | 1607813..1608589 | - | 777 | WP_155716908.1 | Rha family transcriptional regulator | - |
| SAST44_RS07715 () | 1608612..1608839 | - | 228 | WP_015978369.1 | helix-turn-helix transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|