MGE detailed information
MGE type: IScluster/Tn MGE length: 4709 bp
Accession: NZ_CP033105 Location: 5432739..5437447 Organism: Pseudomonas sp. LTJR-52 Replicon: chromosome
Accession: NZ_CP033105 Location: 5432739..5437447 Organism: Pseudomonas sp. LTJR-52 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EAW52_RS25235 () | 5428001..5429311 | - | 1311 | WP_122044579.1 | sugar ABC transporter substrate-binding protein | - |
| EAW52_RS25240 () | 5429855..5430373 | - | 519 | WP_122044580.1 | hypothetical protein | - |
| EAW52_RS25245 () | 5430456..5430704 | - | 249 | WP_122044581.1 | hypothetical protein | - |
| EAW52_RS25250 () | 5430790..5432373 | - | 1584 | WP_122044582.1 | exodeoxyribonuclease VII large subunit | - |
| EAW52_RS25255 () | 5432375..5432590 | - | 216 | WP_122044583.1 | exodeoxyribonuclease VII small subunit | - |
| EAW52_RS25260 () | 5432739..5433883 | - | 1145 | Protein_4948 | IS200-IS605 family transposase ISEc42 | Transposase |
| EAW52_RS25265 () | 5434281..5434703 | - | 423 | WP_122044584.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| EAW52_RS25270 () | 5434703..5434954 | - | 252 | WP_122044585.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| EAW52_RS25275 () | 5435183..5435398 | - | 216 | WP_122044586.1 | hypothetical protein | - |
| EAW52_RS25285 () | 5437058..5437652 | - | 595 | Protein_4952 | IS110 family transposase ISPst6 | Transposase |
| EAW52_RS25290 () | 5438197..5438556 | - | 360 | WP_122044588.1 | Rieske (2Fe-2S) protein | - |
| EAW52_RS25295 () | 5438560..5439501 | - | 942 | WP_122044589.1 | VOC family protein | - |
| EAW52_RS25300 () | 5439526..5440683 | - | 1158 | WP_122044590.1 | prolyl oligopeptidase family serine peptidase | - |
| EAW52_RS26145 () | 5440806..5440979 | - | 174 | WP_162997740.1 | hypothetical protein | - |
| EAW52_RS25305 () | 5441013..5441765 | - | 753 | WP_122044591.1 | SDR family oxidoreductase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|