MGE detailed information
MGE type: Genomic_island MGE length: 16230 bp
Accession: NZ_CP033105 Location: 4913207..4929436 Organism: Pseudomonas sp. LTJR-52 Replicon: chromosome
Accession: NZ_CP033105 Location: 4913207..4929436 Organism: Pseudomonas sp. LTJR-52 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EAW52_RS22675 () | 4909634..4911259 | + | 1626 | WP_122044166.1 | methyl-accepting chemotaxis protein | - |
| EAW52_RS22680 () | 4911402..4912943 | + | 1542 | WP_122044167.1 | sensor domain-containing diguanylate cyclase | - |
| EAW52_RS22685 () | 4913207..4913407 | - | 201 | WP_122044168.1 | hypothetical protein | - |
| EAW52_RS22690 () | 4913591..4914910 | - | 1320 | WP_122044169.1 | hypothetical protein | - |
| EAW52_RS22700 () | 4916046..4916246 | - | 201 | WP_122044171.1 | hypothetical protein | - |
| EAW52_RS22705 () | 4916623..4917027 | - | 405 | WP_122044172.1 | RidA family protein | - |
| EAW52_RS22710 () | 4917168..4918112 | + | 945 | WP_122044173.1 | HTH-type transcriptional regulator PgrR | VF |
| EAW52_RS22715 () | 4918712..4919068 | + | 357 | WP_122044174.1 | DUF1090 domain-containing protein | - |
| EAW52_RS22725 () | 4919715..4920719 | - | 1005 | WP_122044175.1 | NAD(P)-dependent oxidoreductase | - |
| EAW52_RS22730 () | 4920920..4921444 | + | 525 | WP_177411938.1 | TetR/AcrR family transcriptional regulator | - |
| EAW52_RS22735 () | 4921688..4923133 | + | 1446 | WP_122044176.1 | DnaJ domain-containing protein | - |
| EAW52_RS22740 () | 4923352..4924386 | - | 1035 | WP_122044177.1 | GlxA family transcriptional regulator | - |
| EAW52_RS22745 () | 4924546..4924956 | - | 411 | WP_122044178.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| EAW52_RS22750 () | 4924956..4925186 | - | 231 | WP_122044179.1 | antitoxin | Antitoxin Detail |
| EAW52_RS22755 () | 4925677..4926249 | + | 573 | WP_122044180.1 | cupin domain-containing protein | - |
| EAW52_RS22760 () | 4926377..4926850 | - | 474 | WP_122044181.1 | hypothetical protein | - |
| EAW52_RS22765 () | 4926853..4927635 | - | 783 | WP_122044182.1 | hypothetical protein | - |
| EAW52_RS22775 () | 4928195..4929436 | + | 1242 | WP_162997692.1 | hypothetical protein | - |
| EAW52_RS26055 () | 4929647..4929829 | - | 183 | WP_162997693.1 | hypothetical protein | - |
| EAW52_RS22780 () | 4930331..4931899 | + | 1569 | WP_122044185.1 | RopAA-2 | - |
| EAW52_RS22785 () | 4932128..4932661 | - | 534 | WP_074825779.1 | RNA polymerase sigma factor | - |
| EAW52_RS22790 () | 4932920..4934086 | + | 1167 | WP_162997694.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|